RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 SLIT1O75093 1534 aa8.9□□□□□ -0.98
SIK3-213ENST00000497049 NRXN1Q9ULB1 1477 aa8.9□□□□□ -0.98
SIK3-213ENST00000497049 MYOM2P54296 1465 aa8.89□□□□□ -0.99
SIK3-213ENST00000497049 PLEKHG1Q9ULL1 1385 aa8.89□□□□□ -0.99
SIK3-213ENST00000497049 PTPN5P54829 565 aa8.89□□□□□ -0.99
SIK3-213ENST00000497049 SIRT1Q96EB6 747 aa8.89□□□□□ -0.99
SIK3-213ENST00000497049 PHOX2BQ99453 314 aa8.89□□□□□ -0.99
SIK3-213ENST00000497049 CEP170BQ9Y4F5 1589 aaPredicted RBP8.88□□□□□ -0.99
SIK3-213ENST00000497049 TTLL12Q14166 644 aaPredicted RBP8.88□□□□□ -0.99
SIK3-213ENST00000497049 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 CARD11Q9BXL7 1154 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 SLC24A3Q9HC58 644 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 NEXMIFQ5QGS0 1516 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
SIK3-213ENST00000497049 GPRASP1Q5JY77 1395 aa8.87□□□□□ -0.99
SIK3-213ENST00000497049 TRIM66O15016 1216 aa8.87□□□□□ -0.99
SIK3-213ENST00000497049 HSPA2P54652 639 aa8.87□□□□□ -0.99
SIK3-213ENST00000497049 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
SIK3-213ENST00000497049 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
SIK3-213ENST00000497049 TMEM132EQ6IEE7 984 aa8.87□□□□□ -0.99
SIK3-213ENST00000497049 UBR1Q8IWV7 1749 aa8.87□□□□□ -0.99
SIK3-213ENST00000497049 ROCK2O75116 1388 aaKnown RBP8.86□□□□□ -0.99
SIK3-213ENST00000497049 MED14O60244 1454 aa8.86□□□□□ -0.99
SIK3-213ENST00000497049 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
SIK3-213ENST00000497049 WBP1LQ9NX94 342 aa8.86□□□□□ -0.99
SIK3-213ENST00000497049 SCAF11Q99590 1463 aaKnown RBP8.85□□□□□ -0.99
SIK3-213ENST00000497049 MYO3AQ8NEV4 1616 aa8.85□□□□□ -0.99
SIK3-213ENST00000497049 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
SIK3-213ENST00000497049 ABCC11Q96J66 1382 aa8.85□□□□□ -0.99
SIK3-213ENST00000497049 PPLO60437 1756 aa8.84□□□□□ -0.99
SIK3-213ENST00000497049 DDX11L8A8MPP1 907 aa8.84□□□□□ -0.99
SIK3-213ENST00000497049 ADAMTS13Q76LX8 1427 aa8.84□□□□□ -0.99
SIK3-213ENST00000497049 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
SIK3-213ENST00000497049 PIK3R4Q99570 1358 aa8.84□□□□□ -0.99
SIK3-213ENST00000497049 RALGAPBQ86X10 1494 aa8.83□□□□□ -1
SIK3-213ENST00000497049 ST20-MTHFSA0A0A6YYL1 179 aa8.83□□□□□ -1
SIK3-213ENST00000497049 CFHP08603 1231 aa8.83□□□□□ -1
SIK3-213ENST00000497049 HSPA5P11021 654 aaKnown RBP8.83□□□□□ -1
SIK3-213ENST00000497049 KCNA6P17658 529 aa8.83□□□□□ -1
SIK3-213ENST00000497049 ILDR2Q71H61 639 aa8.83□□□□□ -1
SIK3-213ENST00000497049 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
SIK3-213ENST00000497049 TRAK1Q9UPV9 953 aa8.83□□□□□ -1
SIK3-213ENST00000497049 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
SIK3-213ENST00000497049 ZNF142P52746 1687 aaPredicted RBP8.83□□□□□ -1
SIK3-213ENST00000497049 METP08581 1390 aa8.83□□□□□ -1
SIK3-213ENST00000497049 MYO5BQ9ULV0 1848 aa8.82□□□□□ -1
SIK3-213ENST00000497049 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
SIK3-213ENST00000497049 PDE4DQ08499 809 aa8.82□□□□□ -1
SIK3-213ENST00000497049 ALKQ9UM73 1620 aa8.82□□□□□ -1
SIK3-213ENST00000497049 LRPPRCP42704 1394 aaKnown RBP8.82□□□□□ -1
SIK3-213ENST00000497049 IFT172Q9UG01 1749 aa8.82□□□□□ -1
SIK3-213ENST00000497049 SETBP1Q9Y6X0 1596 aa8.82□□□□□ -1
SIK3-213ENST00000497049 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
SIK3-213ENST00000497049 CD46P15529 392 aa8.81□□□□□ -1
SIK3-213ENST00000497049 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
SIK3-213ENST00000497049 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
SIK3-213ENST00000497049 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
SIK3-213ENST00000497049 PUS7Q96PZ0 661 aaKnown RBP8.81□□□□□ -1
SIK3-213ENST00000497049 STK26Q9P289 416 aa8.81□□□□□ -1
SIK3-213ENST00000497049 YTHDC2Q9H6S0 1430 aaKnown RBP8.8□□□□□ -1
SIK3-213ENST00000497049 KIAA1210Q9ULL0 1709 aa8.8□□□□□ -1
SIK3-213ENST00000497049 SLC10A3P09131 477 aa8.8□□□□□ -1
SIK3-213ENST00000497049 USP46P62068 366 aa8.8□□□□□ -1
SIK3-213ENST00000497049 DIXDC1Q155Q3 683 aa8.8□□□□□ -1
SIK3-213ENST00000497049 NLRP7Q8WX94 980 aa8.8□□□□□ -1
SIK3-213ENST00000497049 TESK2Q96S53 571 aa8.8□□□□□ -1
SIK3-213ENST00000497049 USP47Q96K76 1375 aa8.8□□□□□ -1
SIK3-213ENST00000497049 ADGRB1O14514 1584 aa8.79□□□□□ -1
SIK3-213ENST00000497049 GCGRP47871 477 aa8.79□□□□□ -1
SIK3-213ENST00000497049 APLP1P51693 650 aa8.79□□□□□ -1
SIK3-213ENST00000497049 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
SIK3-213ENST00000497049 POGKQ9P215 609 aa8.79□□□□□ -1
SIK3-213ENST00000497049 GTF3C3Q9Y5Q9 886 aa8.79□□□□□ -1
SIK3-213ENST00000497049 TRPM1Q7Z4N2 1603 aa8.79□□□□□ -1
SIK3-213ENST00000497049 CENPJQ9HC77 1338 aaPredicted RBP8.79□□□□□ -1
SIK3-213ENST00000497049 EIF3AQ14152 1382 aaKnown RBP8.78□□□□□ -1
SIK3-213ENST00000497049 SSTR3P32745 418 aaPredicted RBP8.78□□□□□ -1
SIK3-213ENST00000497049 CDCA8Q53HL2 280 aa8.78□□□□□ -1
SIK3-213ENST00000497049 PRAM1Q96QH2 718 aa8.78□□□□□ -1
SIK3-213ENST00000497049 HIRIP3Q9BW71 556 aaPredicted RBP8.78□□□□□ -1
SIK3-213ENST00000497049 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
SIK3-213ENST00000497049 FAM135BQ49AJ0 1406 aa8.78□□□□□ -1
SIK3-213ENST00000497049 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
SIK3-213ENST00000497049 ITGBL1O95965 494 aaPredicted RBP8.77□□□□□ -1.01
SIK3-213ENST00000497049 TMF1P82094 1093 aa8.77□□□□□ -1.01
SIK3-213ENST00000497049 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
SIK3-213ENST00000497049 TECPR2O15040 1411 aa8.77□□□□□ -1.01
SIK3-213ENST00000497049 PTPRUQ92729 1446 aa8.77□□□□□ -1.01
SIK3-213ENST00000497049 NRXN3Q9Y4C0 1643 aa8.76□□□□□ -1.01
SIK3-213ENST00000497049 SBNO2Q9Y2G9 1366 aa8.76□□□□□ -1.01
SIK3-213ENST00000497049 DIEXFQ68CQ4 756 aaKnown RBP8.76□□□□□ -1.01
SIK3-213ENST00000497049 PROSER2Q86WR7 435 aaPredicted RBP8.76□□□□□ -1.01
SIK3-213ENST00000497049 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
SIK3-213ENST00000497049 DIP2AQ14689 1571 aa8.76□□□□□ -1.01
SIK3-213ENST00000497049 LAMC1P11047 1609 aa8.76□□□□□ -1.01
SIK3-213ENST00000497049 KDM4AO75164 1064 aa8.75□□□□□ -1.01
SIK3-213ENST00000497049 NR1I2O75469 434 aa8.75□□□□□ -1.01
SIK3-213ENST00000497049 ATP6V1AP38606 617 aa8.75□□□□□ -1.01
SIK3-213ENST00000497049 NUTM1Q86Y26 1132 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms