RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
MDM2-220ENST00000496959 SCTRP47872 440 aa11.63□□□□□ -0.55
MDM2-220ENST00000496959 PHTF2Q8N3S3 785 aa11.63□□□□□ -0.55
MDM2-220ENST00000496959 DOLKQ9UPQ8 538 aa11.62□□□□□ -0.55
MDM2-220ENST00000496959 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
MDM2-220ENST00000496959 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
MDM2-220ENST00000496959 USP4Q13107 963 aa11.6□□□□□ -0.55
MDM2-220ENST00000496959 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
MDM2-220ENST00000496959 H3BM21 787 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 MEN1O00255 615 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 TRAK2O60296 914 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 VEGFBP49765 207 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
MDM2-220ENST00000496959 A0A1W2PRU2 124 aa11.58□□□□□ -0.56
MDM2-220ENST00000496959 IRF7Q92985 503 aa11.58□□□□□ -0.56
MDM2-220ENST00000496959 NLRP3Q96P20 1036 aa11.58□□□□□ -0.56
MDM2-220ENST00000496959 GPC1P35052 558 aa11.57□□□□□ -0.56
MDM2-220ENST00000496959 RNF144AP50876 292 aaPredicted RBP11.57□□□□□ -0.56
MDM2-220ENST00000496959 PTSQ03393 145 aa11.57□□□□□ -0.56
MDM2-220ENST00000496959 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
MDM2-220ENST00000496959 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
MDM2-220ENST00000496959 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
MDM2-220ENST00000496959 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
MDM2-220ENST00000496959 GNRH1P01148 92 aa11.56□□□□□ -0.56
MDM2-220ENST00000496959 OXLD1Q5BKU9 147 aa11.56□□□□□ -0.56
MDM2-220ENST00000496959 LYSMD3Q7Z3D4 306 aa11.56□□□□□ -0.56
MDM2-220ENST00000496959 ALG2Q9H553 416 aa11.56□□□□□ -0.56
MDM2-220ENST00000496959 PPFIA3O75145 1194 aa11.55□□□□□ -0.56
MDM2-220ENST00000496959 PLPP7Q8NBV4 271 aa11.55□□□□□ -0.56
MDM2-220ENST00000496959 ARHGEF10LQ9HCE6 1279 aa11.55□□□□□ -0.56
MDM2-220ENST00000496959 CLN3Q13286 438 aa11.54□□□□□ -0.56
MDM2-220ENST00000496959 CLUAP1Q96AJ1 413 aa11.54□□□□□ -0.56
MDM2-220ENST00000496959 SLC27A3Q5K4L6 730 aa11.52□□□□□ -0.57
MDM2-220ENST00000496959 PRICKLE2Q7Z3G6 844 aa11.52□□□□□ -0.57
MDM2-220ENST00000496959 SLC35F4A4IF30 521 aa11.51□□□□□ -0.57
MDM2-220ENST00000496959 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
MDM2-220ENST00000496959 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
MDM2-220ENST00000496959 CCDC155Q8N6L0 562 aa11.51□□□□□ -0.57
MDM2-220ENST00000496959 RAB6BQ9NRW1 208 aa11.51□□□□□ -0.57
MDM2-220ENST00000496959 WIPF1O43516 503 aa11.5□□□□□ -0.57
MDM2-220ENST00000496959 ESCO1Q5FWF5 840 aa11.5□□□□□ -0.57
MDM2-220ENST00000496959 LCE2CQ5TA81 110 aa11.5□□□□□ -0.57
MDM2-220ENST00000496959 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
MDM2-220ENST00000496959 ESYT1Q9BSJ8 1104 aa11.5□□□□□ -0.57
MDM2-220ENST00000496959 PIK3CDO00329 1044 aa11.49□□□□□ -0.57
MDM2-220ENST00000496959 SKIP12755 728 aa11.49□□□□□ -0.57
MDM2-220ENST00000496959 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
MDM2-220ENST00000496959 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
MDM2-220ENST00000496959 LZTS3O60299 673 aaPredicted RBP11.48□□□□□ -0.57
MDM2-220ENST00000496959 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
MDM2-220ENST00000496959 A6NJR5 290 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 IL2RAP01589 272 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 VSIG8P0DPA2 414 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 GMPRP36959 345 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 EML3Q32P44 896 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
MDM2-220ENST00000496959 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
MDM2-220ENST00000496959 RHOQP17081 205 aa11.46□□□□□ -0.57
MDM2-220ENST00000496959 CENPCQ03188 943 aa11.46□□□□□ -0.57
MDM2-220ENST00000496959 ITGA6P23229 1130 aa11.45□□□□□ -0.58
MDM2-220ENST00000496959 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
MDM2-220ENST00000496959 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
MDM2-220ENST00000496959 ADAMTS19Q8TE59 1207 aa11.45□□□□□ -0.58
MDM2-220ENST00000496959 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
MDM2-220ENST00000496959 POU4F2Q12837 409 aa11.44□□□□□ -0.58
MDM2-220ENST00000496959 ZSCAN10Q96SZ4 725 aaPredicted RBP11.44□□□□□ -0.58
MDM2-220ENST00000496959 NOD1Q9Y239 953 aa11.44□□□□□ -0.58
MDM2-220ENST00000496959 SPATA31C2B4DYI2 1134 aa11.43□□□□□ -0.58
MDM2-220ENST00000496959 NANOS1Q8WY41 292 aaKnown RBP11.43□□□□□ -0.58
MDM2-220ENST00000496959 ETNK1Q9HBU6 452 aa11.43□□□□□ -0.58
MDM2-220ENST00000496959 NCOA4Q13772 614 aa11.42□□□□□ -0.58
MDM2-220ENST00000496959 WDR44Q5JSH3 913 aa11.42□□□□□ -0.58
MDM2-220ENST00000496959 TAS1R3Q7RTX0 852 aa11.42□□□□□ -0.58
MDM2-220ENST00000496959 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
MDM2-220ENST00000496959 CDC14CA4D256 554 aa11.41□□□□□ -0.58
MDM2-220ENST00000496959 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
MDM2-220ENST00000496959 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
MDM2-220ENST00000496959 GDF10P55107 478 aa11.41□□□□□ -0.58
MDM2-220ENST00000496959 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
MDM2-220ENST00000496959 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
MDM2-220ENST00000496959 GLMNQ92990 594 aa11.41□□□□□ -0.58
MDM2-220ENST00000496959 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
MDM2-220ENST00000496959 INHAP05111 366 aa11.4□□□□□ -0.58
MDM2-220ENST00000496959 TMEM214Q6NUQ4 689 aaKnown RBP11.4□□□□□ -0.58
MDM2-220ENST00000496959 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
MDM2-220ENST00000496959 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.58
MDM2-220ENST00000496959 SCNN1DP51172 638 aa11.39□□□□□ -0.59
MDM2-220ENST00000496959 TLR1Q15399 786 aa11.39□□□□□ -0.59
MDM2-220ENST00000496959 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
MDM2-220ENST00000496959 DEPDC4Q8N2C3 294 aa11.39□□□□□ -0.59
MDM2-220ENST00000496959 VWA5B2Q8N398 1253 aa11.39□□□□□ -0.59
MDM2-220ENST00000496959 FHDC1Q9C0D6 1143 aaPredicted RBP11.39□□□□□ -0.59
MDM2-220ENST00000496959 ATP9BO43861 1147 aa11.38□□□□□ -0.59
MDM2-220ENST00000496959 GTF2IP78347 998 aa11.38□□□□□ -0.59
MDM2-220ENST00000496959 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
MDM2-220ENST00000496959 TIMMDC1Q9NPL8 285 aa11.38□□□□□ -0.59
MDM2-220ENST00000496959 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
MDM2-220ENST00000496959 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms