RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 TRPC5Q9UL62 973 aaPredicted RBP24.12■■□□□ 1.45
RGP1-202ENST00000496906 TMPOP42166 694 aaKnown RBP24.12■■□□□ 1.45
RGP1-202ENST00000496906 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
RGP1-202ENST00000496906 WNK3Q9BYP7 1800 aa24.12■■□□□ 1.45
RGP1-202ENST00000496906 NFE2L2Q16236 605 aa24.11■■□□□ 1.45
RGP1-202ENST00000496906 AMOTQ4VCS5 1084 aa24.11■■□□□ 1.45
RGP1-202ENST00000496906 BARGINQ6ZT62 677 aa24.11■■□□□ 1.45
RGP1-202ENST00000496906 RRP7AQ9Y3A4 280 aaKnown RBP24.11■■□□□ 1.45
RGP1-202ENST00000496906 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
RGP1-202ENST00000496906 GAS2L2Q8NHY3 880 aa24.1■■□□□ 1.45
RGP1-202ENST00000496906 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
RGP1-202ENST00000496906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.1■■□□□ 1.45
RGP1-202ENST00000496906 PKD1L3Q7Z443 1732 aa24.1■■□□□ 1.45
RGP1-202ENST00000496906 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
RGP1-202ENST00000496906 GJD4Q96KN9 370 aaPredicted RBP24.09■■□□□ 1.45
RGP1-202ENST00000496906 GLI3P10071 1580 aa24.09■■□□□ 1.45
RGP1-202ENST00000496906 NEUROD2Q15784 382 aa24.08■■□□□ 1.44
RGP1-202ENST00000496906 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.44
RGP1-202ENST00000496906 NGEFQ8N5V2 710 aa24.08■■□□□ 1.44
RGP1-202ENST00000496906 CDCA7Q9BWT1 371 aaPredicted RBP24.08■■□□□ 1.44
RGP1-202ENST00000496906 QTRT2Q9H974 415 aaKnown RBP24.08■■□□□ 1.44
RGP1-202ENST00000496906 RIPK4P57078 832 aa24.07■■□□□ 1.44
RGP1-202ENST00000496906 SPG7Q9UQ90 795 aa24.06■■□□□ 1.44
RGP1-202ENST00000496906 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
RGP1-202ENST00000496906 ZBED9Q6R2W3 1325 aa24.05■■□□□ 1.44
RGP1-202ENST00000496906 FAM98CQ17RN3 349 aaKnown RBP24.04■■□□□ 1.44
RGP1-202ENST00000496906 CCDC27Q2M243 656 aa24.04■■□□□ 1.44
RGP1-202ENST00000496906 ZNF530Q6P9A1 599 aaPredicted RBP24.04■■□□□ 1.44
RGP1-202ENST00000496906 ZCRB1Q8TBF4 217 aaKnown RBP24.04■■□□□ 1.44
RGP1-202ENST00000496906 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
RGP1-202ENST00000496906 DLG5Q8TDM6 1919 aa24.03■■□□□ 1.44
RGP1-202ENST00000496906 TNS2Q63HR2 1409 aa24.03■■□□□ 1.44
RGP1-202ENST00000496906 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 THSD7AQ9UPZ6 1657 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 POTEAQ6S8J7 498 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 SHANK3Q9BYB0 1731 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 PCDH11XQ9BZA7 1347 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 PCDH11YQ9BZA8 1340 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 LRRC37A3O60309 1634 aa24.02■■□□□ 1.44
RGP1-202ENST00000496906 AKAP4Q5JQC9 854 aa24.01■■□□□ 1.43
RGP1-202ENST00000496906 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
RGP1-202ENST00000496906 ZNF521Q96K83 1311 aa24.01■■□□□ 1.43
RGP1-202ENST00000496906 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
RGP1-202ENST00000496906 CYP27B1O15528 508 aa24■■□□□ 1.43
RGP1-202ENST00000496906 LMOD3Q0VAK6 560 aa24■■□□□ 1.43
RGP1-202ENST00000496906 C1orf141Q5JVX7 400 aa24■■□□□ 1.43
RGP1-202ENST00000496906 PHKG2P15735 406 aa23.99■■□□□ 1.43
RGP1-202ENST00000496906 EXOC5O00471 708 aa23.99■■□□□ 1.43
RGP1-202ENST00000496906 HTATSF1O43719 755 aaKnown RBP23.99■■□□□ 1.43
RGP1-202ENST00000496906 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
RGP1-202ENST00000496906 DDB1Q16531 1140 aa23.99■■□□□ 1.43
RGP1-202ENST00000496906 IFNL2Q8IZJ0 200 aa23.99■■□□□ 1.43
RGP1-202ENST00000496906 RBM6P78332 1123 aaKnown RBP23.97■■□□□ 1.43
RGP1-202ENST00000496906 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
RGP1-202ENST00000496906 DCTN1Q14203 1278 aa23.95■■□□□ 1.43
RGP1-202ENST00000496906 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.43
RGP1-202ENST00000496906 MCM10Q7L590 875 aa23.95■■□□□ 1.42
RGP1-202ENST00000496906 ADAMTS7Q9UKP4 1686 aa23.94■■□□□ 1.42
RGP1-202ENST00000496906 CEMIPQ8WUJ3 1361 aa23.94■■□□□ 1.42
RGP1-202ENST00000496906 A0A0G2JS52 829 aa23.94■■□□□ 1.42
RGP1-202ENST00000496906 MYT1Q01538 1121 aa23.94■■□□□ 1.42
RGP1-202ENST00000496906 IL17REQ8NFR9 667 aa23.94■■□□□ 1.42
RGP1-202ENST00000496906 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
RGP1-202ENST00000496906 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
RGP1-202ENST00000496906 HSP90AB1P08238 724 aaKnown RBP23.93■■□□□ 1.42
RGP1-202ENST00000496906 NKX1-1Q15270 411 aaPredicted RBP23.93■■□□□ 1.42
RGP1-202ENST00000496906 MPRIPQ6WCQ1 1025 aa23.93■■□□□ 1.42
RGP1-202ENST00000496906 WDR63Q8IWG1 891 aa23.93■■□□□ 1.42
RGP1-202ENST00000496906 RXRBP28702 533 aa23.92■■□□□ 1.42
RGP1-202ENST00000496906 SEPT12Q8IYM1 358 aa23.92■■□□□ 1.42
RGP1-202ENST00000496906 RNMTO43148 476 aaKnown RBP23.91■■□□□ 1.42
RGP1-202ENST00000496906 DCAF5Q96JK2 942 aa23.91■■□□□ 1.42
RGP1-202ENST00000496906 LGR6Q9HBX8 967 aa23.91■■□□□ 1.42
RGP1-202ENST00000496906 GOLGA2Q08379 1002 aa23.9■■□□□ 1.42
RGP1-202ENST00000496906 MARCH10Q8NA82 808 aaPredicted RBP23.9■■□□□ 1.42
RGP1-202ENST00000496906 CALD1Q05682 793 aaKnown RBP23.89■■□□□ 1.41
RGP1-202ENST00000496906 IL16Q14005 1332 aa23.88■■□□□ 1.41
RGP1-202ENST00000496906 PDE3BQ13370 1112 aa23.88■■□□□ 1.41
RGP1-202ENST00000496906 SCN11AQ9UI33 1791 aa23.88■■□□□ 1.41
RGP1-202ENST00000496906 SPINK5Q9NQ38 1064 aaPredicted RBP23.87■■□□□ 1.41
RGP1-202ENST00000496906 CDCA7LQ96GN5 454 aa23.86■■□□□ 1.41
RGP1-202ENST00000496906 MRC1P22897 1456 aa23.86■■□□□ 1.41
RGP1-202ENST00000496906 VIRMAQ69YN4 1812 aaKnown RBP23.86■■□□□ 1.41
RGP1-202ENST00000496906 RGS12O14924 1447 aa23.84■■□□□ 1.41
RGP1-202ENST00000496906 TOGARAM1Q9Y4F4 1720 aa23.84■■□□□ 1.41
RGP1-202ENST00000496906 E9PSI1 815 aa23.84■■□□□ 1.41
RGP1-202ENST00000496906 SLFN5Q08AF3 891 aa23.84■■□□□ 1.41
RGP1-202ENST00000496906 IFT57Q9NWB7 429 aa23.84■■□□□ 1.41
RGP1-202ENST00000496906 ZNF853P0CG23 659 aa23.83■■□□□ 1.41
RGP1-202ENST00000496906 TEFQ10587 303 aa23.83■■□□□ 1.41
RGP1-202ENST00000496906 CFAP44Q96MT7 982 aa23.83■■□□□ 1.41
RGP1-202ENST00000496906 SLC52A2Q9HAB3 445 aa23.83■■□□□ 1.41
RGP1-202ENST00000496906 ERVV-2B6SEH9 535 aa23.82■■□□□ 1.4
RGP1-202ENST00000496906 GNAI1P63096 354 aa23.82■■□□□ 1.4
RGP1-202ENST00000496906 TAF7Q15545 349 aaPredicted RBP23.81■■□□□ 1.4
RGP1-202ENST00000496906 TRMT2AQ8IZ69 625 aaKnown RBP23.81■■□□□ 1.4
RGP1-202ENST00000496906 SIPA1L3O60292 1781 aaPredicted RBP23.81■■□□□ 1.4
RGP1-202ENST00000496906 BRWD3Q6RI45 1802 aa23.8■■□□□ 1.4
RGP1-202ENST00000496906 BCL9O00512 1426 aa23.8■■□□□ 1.4
RGP1-202ENST00000496906 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms