RNA–Protein interactions for RNA: ENST00000496854.1

ITGAV-208, Transcript of integrin subunit alpha V, humanhuman

TSL 3

Gene ITGAV, Length 611 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-208ENST00000496854 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
ITGAV-208ENST00000496854 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
ITGAV-208ENST00000496854 GLI3P10071 1580 aa11.88□□□□□ -0.51
ITGAV-208ENST00000496854 PLCH1Q4KWH8 1693 aa11.87□□□□□ -0.51
ITGAV-208ENST00000496854 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
ITGAV-208ENST00000496854 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
ITGAV-208ENST00000496854 BCL9LQ86UU0 1499 aa11.86□□□□□ -0.51
ITGAV-208ENST00000496854 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
ITGAV-208ENST00000496854 NPHP3Q7Z494 1330 aa11.86□□□□□ -0.51
ITGAV-208ENST00000496854 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
ITGAV-208ENST00000496854 XPCQ01831 940 aaPredicted RBP11.85□□□□□ -0.51
ITGAV-208ENST00000496854 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
ITGAV-208ENST00000496854 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
ITGAV-208ENST00000496854 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 WAPLQ7Z5K2 1190 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 USP21Q9UK80 565 aa11.84□□□□□ -0.51
ITGAV-208ENST00000496854 ABCC11Q96J66 1382 aa11.83□□□□□ -0.52
ITGAV-208ENST00000496854 SLIT2O94813 1529 aa11.83□□□□□ -0.52
ITGAV-208ENST00000496854 FNBP4Q8N3X1 1017 aaPredicted RBP11.83□□□□□ -0.52
ITGAV-208ENST00000496854 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
ITGAV-208ENST00000496854 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.52
ITGAV-208ENST00000496854 RGL3Q3MIN7 710 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
ITGAV-208ENST00000496854 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 STK26Q9P289 416 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 TRPC5Q9UL62 973 aaPredicted RBP11.82□□□□□ -0.52
ITGAV-208ENST00000496854 ADGRB1O14514 1584 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 TRPM3Q9HCF6 1732 aaPredicted RBP11.82□□□□□ -0.52
ITGAV-208ENST00000496854 NWD2Q9ULI1 1742 aa11.82□□□□□ -0.52
ITGAV-208ENST00000496854 NRAPQ86VF7 1730 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 BHMG1C9JSJ3 638 aaPredicted RBP11.81□□□□□ -0.52
ITGAV-208ENST00000496854 FOXO3O43524 673 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 KIAA1468Q9P260 1216 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
ITGAV-208ENST00000496854 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
ITGAV-208ENST00000496854 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
ITGAV-208ENST00000496854 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
ITGAV-208ENST00000496854 MPHOSPH9Q99550 1183 aa11.8□□□□□ -0.52
ITGAV-208ENST00000496854 DLC1Q96QB1 1528 aa11.8□□□□□ -0.52
ITGAV-208ENST00000496854 ALS2Q96Q42 1657 aa11.79□□□□□ -0.52
ITGAV-208ENST00000496854 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
ITGAV-208ENST00000496854 SPATA31A3Q5VYP0 1347 aa11.79□□□□□ -0.52
ITGAV-208ENST00000496854 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
ITGAV-208ENST00000496854 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
ITGAV-208ENST00000496854 KCTD12Q96CX2 325 aaKnown RBP11.78□□□□□ -0.52
ITGAV-208ENST00000496854 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
ITGAV-208ENST00000496854 PRSS12P56730 875 aa11.77□□□□□ -0.53
ITGAV-208ENST00000496854 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
ITGAV-208ENST00000496854 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
ITGAV-208ENST00000496854 TSKSQ9UJT2 592 aa11.76□□□□□ -0.53
ITGAV-208ENST00000496854 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
ITGAV-208ENST00000496854 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
ITGAV-208ENST00000496854 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
ITGAV-208ENST00000496854 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
ITGAV-208ENST00000496854 C14orf93Q9H972 538 aaKnown RBP11.74□□□□□ -0.53
ITGAV-208ENST00000496854 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
ITGAV-208ENST00000496854 SEPT9Q9UHD8 586 aaPredicted RBP11.74□□□□□ -0.53
ITGAV-208ENST00000496854 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
ITGAV-208ENST00000496854 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
ITGAV-208ENST00000496854 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
ITGAV-208ENST00000496854 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
ITGAV-208ENST00000496854 ITSN1Q15811 1721 aa11.73□□□□□ -0.53
ITGAV-208ENST00000496854 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
ITGAV-208ENST00000496854 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
ITGAV-208ENST00000496854 COL14A1Q05707 1796 aaKnown RBP11.72□□□□□ -0.53
ITGAV-208ENST00000496854 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
ITGAV-208ENST00000496854 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
ITGAV-208ENST00000496854 UNC5CLQ8IV45 518 aa11.72□□□□□ -0.53
ITGAV-208ENST00000496854 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
ITGAV-208ENST00000496854 WNT2BQ93097 391 aa11.72□□□□□ -0.53
ITGAV-208ENST00000496854 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
ITGAV-208ENST00000496854 RBM26Q5T8P6 1007 aaKnown RBP11.71□□□□□ -0.53
ITGAV-208ENST00000496854 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
ITGAV-208ENST00000496854 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
ITGAV-208ENST00000496854 TNS1Q9HBL0 1735 aaKnown RBP11.71□□□□□ -0.54
ITGAV-208ENST00000496854 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.54
ITGAV-208ENST00000496854 ATP7BP35670 1465 aa11.7□□□□□ -0.54
ITGAV-208ENST00000496854 ARHGEF10O15013 1369 aa11.7□□□□□ -0.54
ITGAV-208ENST00000496854 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
ITGAV-208ENST00000496854 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
ITGAV-208ENST00000496854 LRP5O75197 1615 aa11.7□□□□□ -0.54
ITGAV-208ENST00000496854 PRR36Q9H6K5 1346 aa11.69□□□□□ -0.54
ITGAV-208ENST00000496854 PTGDRQ13258 359 aa11.69□□□□□ -0.54
ITGAV-208ENST00000496854 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
ITGAV-208ENST00000496854 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
ITGAV-208ENST00000496854 RGPD1P0DJD0 1748 aa11.69□□□□□ -0.54
ITGAV-208ENST00000496854 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
ITGAV-208ENST00000496854 ANKK1Q8NFD2 765 aa11.68□□□□□ -0.54
ITGAV-208ENST00000496854 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
ITGAV-208ENST00000496854 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
ITGAV-208ENST00000496854 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
ITGAV-208ENST00000496854 SMAPO00193 183 aa11.67□□□□□ -0.54
ITGAV-208ENST00000496854 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms