RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 SLIT2O94813 1529 aa8.46□□□□□ -1.05
CACNA1C-229ENST00000496818 FOSBP53539 338 aa8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 UNC5CLQ8IV45 518 aa8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 IL27Q8NEV9 243 aa8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 SPATA31A3Q5VYP0 1347 aa8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 EIF3AQ14152 1382 aaKnown RBP8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
CACNA1C-229ENST00000496818 PSME1Q06323 249 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 PCGF6Q9BYE7 350 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 FMN2Q9NZ56 1722 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 DHX57Q6P158 1386 aaKnown RBP8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 NRXN1Q9ULB1 1477 aa8.45□□□□□ -1.06
CACNA1C-229ENST00000496818 A0A0G2JS52 829 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 MYT1Q01538 1121 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 C6orf132Q5T0Z8 1188 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 MPHOSPH9Q99550 1183 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 KDM4CQ9H3R0 1056 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 SBNO1A3KN83 1393 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 ANKARQ7Z5J8 1434 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 GLI3P10071 1580 aa8.44□□□□□ -1.06
CACNA1C-229ENST00000496818 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
CACNA1C-229ENST00000496818 FAM161AQ3B820 660 aa8.43□□□□□ -1.06
CACNA1C-229ENST00000496818 TMEM132EQ6IEE7 984 aa8.43□□□□□ -1.06
CACNA1C-229ENST00000496818 KRT28Q7Z3Y7 464 aa8.43□□□□□ -1.06
CACNA1C-229ENST00000496818 DLC1Q96QB1 1528 aa8.43□□□□□ -1.06
CACNA1C-229ENST00000496818 VPS72Q15906 364 aa8.42□□□□□ -1.06
CACNA1C-229ENST00000496818 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
CACNA1C-229ENST00000496818 ZSWIM6Q9HCJ5 1215 aa8.42□□□□□ -1.06
CACNA1C-229ENST00000496818 ADGRB2O60241 1585 aa8.42□□□□□ -1.06
CACNA1C-229ENST00000496818 MARF1Q9Y4F3 1742 aaKnown RBP8.42□□□□□ -1.06
CACNA1C-229ENST00000496818 GPRASP1Q5JY77 1395 aa8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 TRIM26Q12899 539 aaPredicted RBP8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 SEPT12Q8IYM1 358 aa8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 PRAM1Q96QH2 718 aa8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 POGKQ9P215 609 aa8.41□□□□□ -1.06
CACNA1C-229ENST00000496818 BAG6P46379 1132 aa8.4□□□□□ -1.06
CACNA1C-229ENST00000496818 SAFB2Q14151 953 aaKnown RBP eCLIP8.4□□□□□ -1.06
CACNA1C-229ENST00000496818 TTLL12Q14166 644 aaPredicted RBP8.4□□□□□ -1.06
CACNA1C-229ENST00000496818 KRT27Q7Z3Y8 459 aa8.4□□□□□ -1.06
CACNA1C-229ENST00000496818 C14orf93Q9H972 538 aaKnown RBP8.4□□□□□ -1.06
CACNA1C-229ENST00000496818 PLCH1Q4KWH8 1693 aa8.4□□□□□ -1.07
CACNA1C-229ENST00000496818 TULP4Q9NRJ4 1543 aa8.39□□□□□ -1.07
CACNA1C-229ENST00000496818 SNPHO15079 494 aa8.39□□□□□ -1.07
CACNA1C-229ENST00000496818 CFAP70Q5T0N1 1121 aa8.39□□□□□ -1.07
CACNA1C-229ENST00000496818 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
CACNA1C-229ENST00000496818 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
CACNA1C-229ENST00000496818 NWD2Q9ULI1 1742 aa8.38□□□□□ -1.07
CACNA1C-229ENST00000496818 DEFB132Q7Z7B7 95 aa8.38□□□□□ -1.07
CACNA1C-229ENST00000496818 CABLES1Q8TDN4 633 aa8.38□□□□□ -1.07
CACNA1C-229ENST00000496818 NLRP7Q8WX94 980 aa8.38□□□□□ -1.07
CACNA1C-229ENST00000496818 FAM117AQ9C073 453 aa8.38□□□□□ -1.07
CACNA1C-229ENST00000496818 ABCA3Q99758 1704 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 ADGRB1O14514 1584 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 AMHR2Q16671 573 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 PPP4R3BQ5MIZ7 849 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 PMFBP1Q8TBY8 1022 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 ATP7BP35670 1465 aa8.37□□□□□ -1.07
CACNA1C-229ENST00000496818 LRP5O75197 1615 aa8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 FAM98CQ17RN3 349 aaKnown RBP8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 LHX8Q68G74 356 aa8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 PHOX2BQ99453 314 aa8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 REPIN1Q9BWE0 567 aaKnown RBP8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 PRDM11Q9NQV5 511 aa8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
CACNA1C-229ENST00000496818 RAB3GAP2Q9H2M9 1393 aa8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 COL14A1Q05707 1796 aaKnown RBP8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 COL9A1P20849 921 aa8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 TRAK1Q9UPV9 953 aa8.35□□□□□ -1.07
CACNA1C-229ENST00000496818 NRAPQ86VF7 1730 aa8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 WASLO00401 505 aaPredicted RBP8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 STAC3Q96MF2 364 aa8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 DISP2A7MBM2 1401 aa8.34□□□□□ -1.07
CACNA1C-229ENST00000496818 SPATA31A5Q5VU36 1347 aa8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 SPATA31A7Q8IWB4 1347 aa8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 FAM83GA6ND36 823 aa8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 PRSS12P56730 875 aa8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 TRPM3Q9HCF6 1732 aaPredicted RBP8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
CACNA1C-229ENST00000496818 PRR36Q9H6K5 1346 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 PSDA5PKW4 1024 aaPredicted RBP8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 PTPREP23469 700 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 THSD7AQ9UPZ6 1657 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 PARD3Q8TEW0 1356 aa8.32□□□□□ -1.08
CACNA1C-229ENST00000496818 KIAA0232Q92628 1395 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms