RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 SYTL4Q96C24 671 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-207ENST00000496756 ANKRD36BQ8N2N9 1353 aa18.23■□□□□ 0.51
PHGDH-207ENST00000496756 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■□□□□ 10.4
PHGDH-207ENST00000496756 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
PHGDH-207ENST00000496756 TUBGCP6Q96RT7 1819 aa18.22■□□□□ 0.51
PHGDH-207ENST00000496756 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
PHGDH-207ENST00000496756 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-207ENST00000496756 CARD11Q9BXL7 1154 aa18.22■□□□□ 0.51
PHGDH-207ENST00000496756 HMGB2P26583 209 aaKnown RBP18.21■□□□□ 0.51
PHGDH-207ENST00000496756 KCNQ4P56696 695 aa18.21■□□□□ 0.51
PHGDH-207ENST00000496756 IP6K1Q92551 441 aa18.21■□□□□ 0.51
PHGDH-207ENST00000496756 FAM208AQ9UK61 1670 aaKnown RBP18.21■□□□□ 0.51
PHGDH-207ENST00000496756 LY75O60449 1722 aa18.2■□□□□ 0.5
PHGDH-207ENST00000496756 USP47Q96K76 1375 aa18.2■□□□□ 0.5
PHGDH-207ENST00000496756 MSH5O43196 834 aa18.2■□□□□ 0.5
PHGDH-207ENST00000496756 GPBP1L1Q9HC44 474 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-207ENST00000496756 CCNL1Q9UK58 526 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-207ENST00000496756 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
PHGDH-207ENST00000496756 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
PHGDH-207ENST00000496756 TMC1Q8TDI8 760 aa18.19■□□□□ 0.5
PHGDH-207ENST00000496756 CD163L1Q9NR16 1453 aa18.19■□□□□ 0.5
PHGDH-207ENST00000496756 TERF2IPQ9NYB0 399 aa18.18■□□□□ 0.5
PHGDH-207ENST00000496756 CD2APQ9Y5K6 639 aa18.18■□□□□ 0.5
PHGDH-207ENST00000496756 COL23A1Q86Y22 540 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-207ENST00000496756 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-207ENST00000496756 DOT1LQ8TEK3 1739 aa18.17■□□□□ 0.5
PHGDH-207ENST00000496756 NSD2O96028 1365 aa18.17■□□□□ 0.5
PHGDH-207ENST00000496756 HSPA6P17066 643 aa18.16■□□□□ 0.5
PHGDH-207ENST00000496756 ZCRB1Q8TBF4 217 aaKnown RBP18.16■□□□□ 0.5
PHGDH-207ENST00000496756 FLAD1Q8NFF5 587 aa18.15■□□□□ 0.5
PHGDH-207ENST00000496756 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
PHGDH-207ENST00000496756 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
PHGDH-207ENST00000496756 DDX10Q13206 875 aaKnown RBP18.13■□□□□ 0.49
PHGDH-207ENST00000496756 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
PHGDH-207ENST00000496756 CGNL1Q0VF96 1302 aa18.12■□□□□ 0.49
PHGDH-207ENST00000496756 A0A1W2PP64 1363 aa18.12■□□□□ 0.49
PHGDH-207ENST00000496756 HOXC9P31274 260 aa18.11■□□□□ 0.49
PHGDH-207ENST00000496756 AMPHP49418 695 aa18.11■□□□□ 0.49
PHGDH-207ENST00000496756 MIER1Q8N108 512 aa18.11■□□□□ 0.49
PHGDH-207ENST00000496756 PUS7Q96PZ0 661 aaKnown RBP18.11■□□□□ 0.49
PHGDH-207ENST00000496756 ADCY9O60503 1353 aa18.11■□□□□ 0.49
PHGDH-207ENST00000496756 WASHC2AQ641Q2 1341 aa18.1■□□□□ 0.49
PHGDH-207ENST00000496756 COG3Q96JB2 828 aa18.1■□□□□ 0.49
PHGDH-207ENST00000496756 MAP3K19Q56UN5 1328 aa18.09■□□□□ 0.49
PHGDH-207ENST00000496756 ZNF526Q8TF50 670 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-207ENST00000496756 C5P01031 1676 aa18.09■□□□□ 0.49
PHGDH-207ENST00000496756 MEGF6O75095 1541 aa18.08■□□□□ 0.49
PHGDH-207ENST00000496756 ANP32CO43423 234 aa18.07■□□□□ 0.48
PHGDH-207ENST00000496756 RAPGEF4Q8WZA2 1011 aa18.07■□□□□ 0.48
PHGDH-207ENST00000496756 RTL1A6NKG5 1358 aa18.05■□□□□ 0.48
PHGDH-207ENST00000496756 RGPD2P0DJD1 1756 aa18.05■□□□□ 0.48
PHGDH-207ENST00000496756 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
PHGDH-207ENST00000496756 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
PHGDH-207ENST00000496756 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
PHGDH-207ENST00000496756 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
PHGDH-207ENST00000496756 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
PHGDH-207ENST00000496756 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
PHGDH-207ENST00000496756 PCDH11XQ9BZA7 1347 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 PCDH11YQ9BZA8 1340 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 TAF1LQ8IZX4 1826 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 NBPF6Q5VWK0 638 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-207ENST00000496756 AK7Q96M32 723 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 NBPF4Q96M43 638 aa18.03■□□□□ 0.48
PHGDH-207ENST00000496756 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-207ENST00000496756 CDCA8Q53HL2 280 aa18.02■□□□□ 0.48
PHGDH-207ENST00000496756 APLP1P51693 650 aa18.01■□□□□ 0.47
PHGDH-207ENST00000496756 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
PHGDH-207ENST00000496756 CCER2I3L3R5 266 aa18■□□□□ 0.47
PHGDH-207ENST00000496756 KIF3CO14782 793 aa18■□□□□ 0.47
PHGDH-207ENST00000496756 FBLN1P23142 703 aa18■□□□□ 0.47
PHGDH-207ENST00000496756 TMF1P82094 1093 aa18■□□□□ 0.47
PHGDH-207ENST00000496756 C4BP0C0L5 1744 aa18■□□□□ 0.47
PHGDH-207ENST00000496756 USHBP1Q8N6Y0 703 aa17.99■□□□□ 0.47
PHGDH-207ENST00000496756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
PHGDH-207ENST00000496756 SSFA2P28290 1259 aa17.98■□□□□ 0.47
PHGDH-207ENST00000496756 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
PHGDH-207ENST00000496756 PHF14O94880 888 aa17.97■□□□□ 0.47
PHGDH-207ENST00000496756 UBR3Q6ZT12 1888 aa17.97■□□□□ 0.47
PHGDH-207ENST00000496756 TOMM70O94826 608 aa17.96■□□□□ 0.47
PHGDH-207ENST00000496756 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-207ENST00000496756 WWC3Q9ULE0 1092 aa17.96■□□□□ 0.47
PHGDH-207ENST00000496756 INSRP06213 1382 aa17.95■□□□□ 0.46
PHGDH-207ENST00000496756 CYP27B1O15528 508 aa17.95■□□□□ 0.46
PHGDH-207ENST00000496756 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
PHGDH-207ENST00000496756 AMIGO3Q86WK7 504 aa17.94■□□□□ 0.46
PHGDH-207ENST00000496756 TOGARAM1Q9Y4F4 1720 aa17.94■□□□□ 0.46
PHGDH-207ENST00000496756 ITGB4P16144 1822 aa17.93■□□□□ 0.46
PHGDH-207ENST00000496756 KIF24Q5T7B8 1368 aa17.93■□□□□ 0.46
PHGDH-207ENST00000496756 FYB1O15117 783 aa17.93■□□□□ 0.46
PHGDH-207ENST00000496756 TESK2Q96S53 571 aa17.93■□□□□ 0.46
PHGDH-207ENST00000496756 FLT4P35916 1363 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 LOC102724428A0A0B4J2F2 783 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 SIK1P57059 783 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 DNAJC5GQ8N7S2 189 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 PIGBQ92521 554 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
PHGDH-207ENST00000496756 TGFB2P61812 414 aa17.91■□□□□ 0.46
PHGDH-207ENST00000496756 NKX1-1Q15270 411 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms