RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
COL15A1-204ENST00000496686 VAMP4O75379 141 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 ANKRD24Q8TF21 1146 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
COL15A1-204ENST00000496686 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
COL15A1-204ENST00000496686 MCM10Q7L590 875 aa19.53■□□□□ 0.72
COL15A1-204ENST00000496686 DDX17Q92841 729 aaKnown RBP19.53■□□□□ 0.72
COL15A1-204ENST00000496686 NHSL1Q5SYE7 1610 aa19.52■□□□□ 0.72
COL15A1-204ENST00000496686 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
COL15A1-204ENST00000496686 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
COL15A1-204ENST00000496686 ERBB3P21860 1342 aa19.51■□□□□ 0.71
COL15A1-204ENST00000496686 TWISTNBQ3B726 338 aaPredicted RBP19.51■□□□□ 0.71
COL15A1-204ENST00000496686 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
COL15A1-204ENST00000496686 DZIP1LQ8IYY4 767 aaKnown RBP19.51■□□□□ 0.71
COL15A1-204ENST00000496686 PANK1Q8TE04 598 aa19.51■□□□□ 0.71
COL15A1-204ENST00000496686 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
COL15A1-204ENST00000496686 FAM208AQ9UK61 1670 aaKnown RBP19.51■□□□□ 0.71
COL15A1-204ENST00000496686 COL18A1P39060 1754 aa19.51■□□□□ 0.71
COL15A1-204ENST00000496686 PLEKHO1Q53GL0 409 aaPredicted RBP19.5■□□□□ 0.71
COL15A1-204ENST00000496686 CENPQQ7L2Z9 268 aaPredicted RBP19.5■□□□□ 0.71
COL15A1-204ENST00000496686 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
COL15A1-204ENST00000496686 ARHGAP45Q92619 1136 aa19.5■□□□□ 0.71
COL15A1-204ENST00000496686 OVOS2A0A0G2JMS6 1433 aa19.5■□□□□ 0.71
COL15A1-204ENST00000496686 SOS1Q07889 1333 aaPredicted RBP19.5■□□□□ 0.71
COL15A1-204ENST00000496686 KDM2BQ8NHM5 1336 aa19.5■□□□□ 0.71
COL15A1-204ENST00000496686 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
COL15A1-204ENST00000496686 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
COL15A1-204ENST00000496686 CLUAP1Q96AJ1 413 aa19.49■□□□□ 0.71
COL15A1-204ENST00000496686 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
COL15A1-204ENST00000496686 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
COL15A1-204ENST00000496686 TSPYL6Q8N831 410 aa19.48■□□□□ 0.71
COL15A1-204ENST00000496686 C8orf58Q8NAV2 365 aa19.48■□□□□ 0.71
COL15A1-204ENST00000496686 LRRC59Q96AG4 307 aaKnown RBP19.48■□□□□ 0.71
COL15A1-204ENST00000496686 AXIN2Q9Y2T1 843 aa19.48■□□□□ 0.71
COL15A1-204ENST00000496686 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
COL15A1-204ENST00000496686 CEMIPQ8WUJ3 1361 aa19.47■□□□□ 0.71
COL15A1-204ENST00000496686 RLBP1P12271 317 aa19.47■□□□□ 0.71
COL15A1-204ENST00000496686 TRIM27P14373 513 aa19.47■□□□□ 0.71
COL15A1-204ENST00000496686 NOB1Q9ULX3 412 aaKnown RBP19.47■□□□□ 0.71
COL15A1-204ENST00000496686 AKAP4Q5JQC9 854 aa19.46■□□□□ 0.71
COL15A1-204ENST00000496686 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
COL15A1-204ENST00000496686 RGPD2P0DJD1 1756 aa19.46■□□□□ 0.71
COL15A1-204ENST00000496686 LTBP4Q8N2S1 1624 aa19.45■□□□□ 0.7
COL15A1-204ENST00000496686 IL17REQ8NFR9 667 aa19.44■□□□□ 0.7
COL15A1-204ENST00000496686 DDX19BQ9UMR2 479 aa19.44■□□□□ 0.7
COL15A1-204ENST00000496686 TAF7Q15545 349 aaPredicted RBP19.43■□□□□ 0.7
COL15A1-204ENST00000496686 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
COL15A1-204ENST00000496686 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
COL15A1-204ENST00000496686 PLEKHG5O94827 1062 aa19.42■□□□□ 0.7
COL15A1-204ENST00000496686 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
COL15A1-204ENST00000496686 CABLES1Q8TDN4 633 aa19.42■□□□□ 0.7
COL15A1-204ENST00000496686 CHMP4BQ9H444 224 aaKnown RBP19.42■□□□□ 0.7
COL15A1-204ENST00000496686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.42■□□□□ 0.7
COL15A1-204ENST00000496686 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
COL15A1-204ENST00000496686 AHDC1Q5TGY3 1603 aaPredicted RBP19.41■□□□□ 0.7
COL15A1-204ENST00000496686 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
COL15A1-204ENST00000496686 RGPD5Q99666 1765 aa19.41■□□□□ 0.7
COL15A1-204ENST00000496686 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
COL15A1-204ENST00000496686 C1orf141Q5JVX7 400 aa19.4■□□□□ 0.7
COL15A1-204ENST00000496686 RAPGEF4Q8WZA2 1011 aa19.39■□□□□ 0.69
COL15A1-204ENST00000496686 NLRP2Q9NX02 1062 aa19.39■□□□□ 0.69
COL15A1-204ENST00000496686 ABCC4O15439 1325 aa19.39■□□□□ 0.69
COL15A1-204ENST00000496686 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.69
COL15A1-204ENST00000496686 PTPRCP08575 1304 aa19.38■□□□□ 0.69
COL15A1-204ENST00000496686 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
COL15A1-204ENST00000496686 TMEM57Q8N5G2 664 aa19.38■□□□□ 0.69
COL15A1-204ENST00000496686 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
COL15A1-204ENST00000496686 CSB-PGBD3P0DP91 1061 aa19.37■□□□□ 0.69
COL15A1-204ENST00000496686 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
COL15A1-204ENST00000496686 PRDM11Q9NQV5 511 aa19.37■□□□□ 0.69
COL15A1-204ENST00000496686 RNMTO43148 476 aaKnown RBP19.36■□□□□ 0.69
COL15A1-204ENST00000496686 CHRNA2Q15822 529 aa19.36■□□□□ 0.69
COL15A1-204ENST00000496686 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
COL15A1-204ENST00000496686 WDR17Q8IZU2 1322 aa19.35■□□□□ 0.69
COL15A1-204ENST00000496686 HOXB7P09629 217 aa19.35■□□□□ 0.69
COL15A1-204ENST00000496686 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
COL15A1-204ENST00000496686 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
COL15A1-204ENST00000496686 KDM3BQ7LBC6 1761 aa19.34■□□□□ 0.69
COL15A1-204ENST00000496686 ROBO1Q9Y6N7 1651 aa19.34■□□□□ 0.69
COL15A1-204ENST00000496686 TEFQ10587 303 aa19.34■□□□□ 0.69
COL15A1-204ENST00000496686 RWDD1Q9H446 243 aaPredicted RBP19.34■□□□□ 0.69
COL15A1-204ENST00000496686 MEGF6O75095 1541 aa19.34■□□□□ 0.69
COL15A1-204ENST00000496686 COL5A2P05997 1499 aaPredicted RBP19.34■□□□□ 0.69
COL15A1-204ENST00000496686 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
COL15A1-204ENST00000496686 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.69
COL15A1-204ENST00000496686 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.68
COL15A1-204ENST00000496686 PCDHB15Q9Y5E8 787 aa19.33■□□□□ 0.68
COL15A1-204ENST00000496686 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
COL15A1-204ENST00000496686 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
COL15A1-204ENST00000496686 IGHDP01880 384 aa19.31■□□□□ 0.68
COL15A1-204ENST00000496686 HDAC1Q13547 482 aaPredicted RBP19.31■□□□□ 0.68
COL15A1-204ENST00000496686 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
COL15A1-204ENST00000496686 RGS12O14924 1447 aa19.31■□□□□ 0.68
COL15A1-204ENST00000496686 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
COL15A1-204ENST00000496686 INTS3Q68E01 1043 aaKnown RBP19.3■□□□□ 0.68
COL15A1-204ENST00000496686 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
COL15A1-204ENST00000496686 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms