RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
CLDN12-213ENST00000496677 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
CLDN12-213ENST00000496677 POLKQ9UBT6 870 aa17.11■□□□□ 0.33
CLDN12-213ENST00000496677 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
CLDN12-213ENST00000496677 SHANK3Q9BYB0 1731 aa17.1■□□□□ 0.33
CLDN12-213ENST00000496677 ANKRD26Q9UPS8 1709 aa17.1■□□□□ 0.33
CLDN12-213ENST00000496677 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
CLDN12-213ENST00000496677 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
CLDN12-213ENST00000496677 BTAF1O14981 1849 aa17.07■□□□□ 0.32
CLDN12-213ENST00000496677 PRIM1P49642 420 aaKnown RBP17.07■□□□□ 0.32
CLDN12-213ENST00000496677 PDGFDQ9GZP0 370 aaPredicted RBP17.07■□□□□ 0.32
CLDN12-213ENST00000496677 MAP2P11137 1827 aaKnown RBP17.07■□□□□ 0.32
CLDN12-213ENST00000496677 NSD2O96028 1365 aa17.06■□□□□ 0.32
CLDN12-213ENST00000496677 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
CLDN12-213ENST00000496677 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
CLDN12-213ENST00000496677 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
CLDN12-213ENST00000496677 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
CLDN12-213ENST00000496677 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
CLDN12-213ENST00000496677 CASZ1Q86V15 1759 aa17.05■□□□□ 0.32
CLDN12-213ENST00000496677 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
CLDN12-213ENST00000496677 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
CLDN12-213ENST00000496677 EYA1Q99502 592 aa17.04■□□□□ 0.32
CLDN12-213ENST00000496677 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
CLDN12-213ENST00000496677 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
CLDN12-213ENST00000496677 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CLDN12-213ENST00000496677 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
CLDN12-213ENST00000496677 CYP27B1O15528 508 aa17.02■□□□□ 0.32
CLDN12-213ENST00000496677 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
CLDN12-213ENST00000496677 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
CLDN12-213ENST00000496677 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
CLDN12-213ENST00000496677 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
CLDN12-213ENST00000496677 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
CLDN12-213ENST00000496677 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
CLDN12-213ENST00000496677 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
CLDN12-213ENST00000496677 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
CLDN12-213ENST00000496677 AKT1S1Q96B36 256 aa17■□□□□ 0.31
CLDN12-213ENST00000496677 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
CLDN12-213ENST00000496677 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
CLDN12-213ENST00000496677 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
CLDN12-213ENST00000496677 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
CLDN12-213ENST00000496677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLDN12-213ENST00000496677 PKD1L3Q7Z443 1732 aa16.99■□□□□ 0.31
CLDN12-213ENST00000496677 PTGER2P43116 358 aa16.98■□□□□ 0.31
CLDN12-213ENST00000496677 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
CLDN12-213ENST00000496677 LY75O60449 1722 aa16.97■□□□□ 0.31
CLDN12-213ENST00000496677 MORC1Q86VD1 984 aa16.97■□□□□ 0.31
CLDN12-213ENST00000496677 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
CLDN12-213ENST00000496677 KCNQ4P56696 695 aa16.96■□□□□ 0.31
CLDN12-213ENST00000496677 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
CLDN12-213ENST00000496677 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
CLDN12-213ENST00000496677 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
CLDN12-213ENST00000496677 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
CLDN12-213ENST00000496677 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
CLDN12-213ENST00000496677 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
CLDN12-213ENST00000496677 MTFR1LQ9H019 292 aa16.93■□□□□ 0.3
CLDN12-213ENST00000496677 PHKG2P15735 406 aa16.92■□□□□ 0.3
CLDN12-213ENST00000496677 PIGBQ92521 554 aa16.92■□□□□ 0.3
CLDN12-213ENST00000496677 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
CLDN12-213ENST00000496677 IL13P35225 146 aa16.91■□□□□ 0.3
CLDN12-213ENST00000496677 MPRIPQ6WCQ1 1025 aa16.91■□□□□ 0.3
CLDN12-213ENST00000496677 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
CLDN12-213ENST00000496677 ITGB4P16144 1822 aa16.91■□□□□ 0.3
CLDN12-213ENST00000496677 QSER1Q2KHR3 1735 aa16.9■□□□□ 0.3
CLDN12-213ENST00000496677 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
CLDN12-213ENST00000496677 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
CLDN12-213ENST00000496677 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
CLDN12-213ENST00000496677 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
CLDN12-213ENST00000496677 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
CLDN12-213ENST00000496677 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
CLDN12-213ENST00000496677 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
CLDN12-213ENST00000496677 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
CLDN12-213ENST00000496677 MTHFSP49914 203 aa16.87■□□□□ 0.29
CLDN12-213ENST00000496677 SMARCC1Q92922 1105 aaPredicted RBP16.87■□□□□ 0.29
CLDN12-213ENST00000496677 KDRP35968 1356 aa16.87■□□□□ 0.29
CLDN12-213ENST00000496677 COL24A1Q17RW2 1714 aa16.87■□□□□ 0.29
CLDN12-213ENST00000496677 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
CLDN12-213ENST00000496677 AMOTQ4VCS5 1084 aa16.85■□□□□ 0.29
CLDN12-213ENST00000496677 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
CLDN12-213ENST00000496677 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
CLDN12-213ENST00000496677 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
CLDN12-213ENST00000496677 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
CLDN12-213ENST00000496677 ERVV-2B6SEH9 535 aa16.84■□□□□ 0.29
CLDN12-213ENST00000496677 ARXQ96QS3 562 aa16.84■□□□□ 0.29
CLDN12-213ENST00000496677 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
CLDN12-213ENST00000496677 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
CLDN12-213ENST00000496677 TMOD3Q9NYL9 352 aa16.84■□□□□ 0.29
CLDN12-213ENST00000496677 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
CLDN12-213ENST00000496677 C5P01031 1676 aa16.83■□□□□ 0.28
CLDN12-213ENST00000496677 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
CLDN12-213ENST00000496677 SYT17Q9BSW7 474 aa16.83■□□□□ 0.28
CLDN12-213ENST00000496677 MAP3K5Q99683 1374 aa16.82■□□□□ 0.28
CLDN12-213ENST00000496677 LOC102724428A0A0B4J2F2 783 aa16.82■□□□□ 0.28
CLDN12-213ENST00000496677 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
CLDN12-213ENST00000496677 SIK1P57059 783 aa16.82■□□□□ 0.28
CLDN12-213ENST00000496677 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
CLDN12-213ENST00000496677 KDM6AO15550 1401 aaPredicted RBP16.81■□□□□ 0.28
CLDN12-213ENST00000496677 HSP90AB1P08238 724 aaKnown RBP16.81■□□□□ 0.28
CLDN12-213ENST00000496677 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
CLDN12-213ENST00000496677 ITPK1Q13572 414 aa16.8■□□□□ 0.28
CLDN12-213ENST00000496677 LINC00116Q8NCU8 138 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms