RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 EIF3JO75822 258 aaKnown RBP16.73■□□□□ 0.27
PKD1-222ENST00000496574 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
PKD1-222ENST00000496574 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
PKD1-222ENST00000496574 NEUROD6Q96NK8 337 aa16.73■□□□□ 0.27
PKD1-222ENST00000496574 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
PKD1-222ENST00000496574 SFPQP23246 707 aaKnown RBP eCLIP16.72■□□□□ 0.27
PKD1-222ENST00000496574 UBE2HP62256 183 aa16.72■□□□□ 0.27
PKD1-222ENST00000496574 TMX3Q96JJ7 454 aa16.72■□□□□ 0.27
PKD1-222ENST00000496574 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
PKD1-222ENST00000496574 TTC12Q9H892 705 aaPredicted RBP16.72■□□□□ 0.27
PKD1-222ENST00000496574 NOL7Q9UMY1 257 aaKnown RBP16.72■□□□□ 0.27
PKD1-222ENST00000496574 SRGAP3O43295 1099 aa16.72■□□□□ 0.27
PKD1-222ENST00000496574 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.27
PKD1-222ENST00000496574 SMAP1Q8IYB5 467 aaPredicted RBP16.71■□□□□ 0.27
PKD1-222ENST00000496574 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
PKD1-222ENST00000496574 GTPBP4Q9BZE4 634 aaKnown RBP16.71■□□□□ 0.27
PKD1-222ENST00000496574 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
PKD1-222ENST00000496574 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
PKD1-222ENST00000496574 CAGE1Q8TC20 777 aa16.71■□□□□ 0.27
PKD1-222ENST00000496574 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.26
PKD1-222ENST00000496574 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.26
PKD1-222ENST00000496574 NEMFO60524 1076 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
PKD1-222ENST00000496574 WASHC4Q2M389 1173 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 CCDC47Q96A33 483 aaKnown RBP16.7■□□□□ 0.26
PKD1-222ENST00000496574 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 CBFA2T2O43439 604 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 STX6O43752 255 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 SKIDA1Q1XH10 827 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 FILIP1LQ4L180 1135 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 TERF1P54274 439 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 ATAD2Q6PL18 1390 aa16.7■□□□□ 0.26
PKD1-222ENST00000496574 NUTM1Q86Y26 1132 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 TRERF1Q96PN7 1200 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 SMARCE1Q969G3 411 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 BIVM-ERCC5R4GMW8 1640 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 PAXBP1Q9Y5B6 917 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 DDX19AQ9NUU7 478 aaKnown RBP16.69■□□□□ 0.26
PKD1-222ENST00000496574 IL16Q14005 1332 aa16.69■□□□□ 0.26
PKD1-222ENST00000496574 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 GIMAP6Q6P9H5 292 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 ANO10Q9NW15 660 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 CLSTN1O94985 981 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 KRT222Q8N1A0 295 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 TESK2Q96S53 571 aa16.68■□□□□ 0.26
PKD1-222ENST00000496574 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
PKD1-222ENST00000496574 ZNF165P49910 485 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 CDR1P51861 262 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 SDSP20132 328 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 URI1O94763 535 aaPredicted RBP16.67■□□□□ 0.26
PKD1-222ENST00000496574 KRT32Q14532 448 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 SMTNL1A8MU46 457 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 PRPF40BQ6NWY9 871 aaKnown RBP16.67■□□□□ 0.26
PKD1-222ENST00000496574 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 RBSNQ9H1K0 784 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 DEF6Q9H4E7 631 aa16.67■□□□□ 0.26
PKD1-222ENST00000496574 PATL2C9JE40 543 aaKnown RBP16.66■□□□□ 0.26
PKD1-222ENST00000496574 POLR3GO15318 223 aaPredicted RBP16.66■□□□□ 0.26
PKD1-222ENST00000496574 PPFIBP1Q86W92 1011 aa16.66■□□□□ 0.26
PKD1-222ENST00000496574 GLRX3O76003 335 aaKnown RBP16.66■□□□□ 0.26
PKD1-222ENST00000496574 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.263e-8■■■■■ 34.4
PKD1-222ENST00000496574 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
PKD1-222ENST00000496574 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
PKD1-222ENST00000496574 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
PKD1-222ENST00000496574 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
PKD1-222ENST00000496574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.66■□□□□ 0.26
PKD1-222ENST00000496574 MARCH6O60337 910 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 ATP2B1P20020 1258 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 BMS1Q14692 1282 aaKnown RBP16.65■□□□□ 0.26
PKD1-222ENST00000496574 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 PDE4CQ08493 712 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 CFAP100Q494V2 611 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 BBXQ8WY36 941 aaPredicted RBP16.65■□□□□ 0.26
PKD1-222ENST00000496574 ERICH2A1L162 156 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 NAP1L1P55209 391 aaKnown RBP16.65■□□□□ 0.26
PKD1-222ENST00000496574 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 USP48Q86UV5 1035 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 AACSQ86V21 672 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
PKD1-222ENST00000496574 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 CCDC102AQ96A19 550 aa16.65■□□□□ 0.26
PKD1-222ENST00000496574 NOL10Q9BSC4 688 aaKnown RBP16.64■□□□□ 0.25
PKD1-222ENST00000496574 CCDC186Q7Z3E2 898 aa16.64■□□□□ 0.25
PKD1-222ENST00000496574 DDX54Q8TDD1 881 aaKnown RBP16.64■□□□□ 0.25
PKD1-222ENST00000496574 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
PKD1-222ENST00000496574 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
PKD1-222ENST00000496574 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
PKD1-222ENST00000496574 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
PKD1-222ENST00000496574 ZGPATQ8N5A5 531 aaKnown RBP16.63■□□□□ 0.25
PKD1-222ENST00000496574 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms