RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 ALS2CR12Q96Q35 445 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 ANO10Q9NW15 660 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 STIM2Q9P246 746 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 SCRIBQ14160 1630 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 FKBP5Q13451 457 aaPredicted RBP9.58□□□□□ -0.88
NPHP1-211ENST00000496524 ANAPC4Q9UJX5 808 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 TUBB4AP04350 444 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 ZSCAN31Q96LW9 406 aaPredicted RBP9.58□□□□□ -0.88
NPHP1-211ENST00000496524 IFI16Q16666 785 aaKnown RBP9.57□□□□□ -0.88
NPHP1-211ENST00000496524 SMC6Q96SB8 1091 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 CAVIN2O95810 425 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC178Q5BJE1 867 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 RAB3IL1Q8TBN0 382 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 GBP6Q6ZN66 633 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 COG3Q96JB2 828 aa9.57□□□□□ -0.88
NPHP1-211ENST00000496524 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.57□□□□□ -0.88
NPHP1-211ENST00000496524 LUC7L2Q9Y383 392 aaKnown RBP9.57□□□□□ -0.88
NPHP1-211ENST00000496524 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
NPHP1-211ENST00000496524 IKBKGQ9Y6K9 419 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 MAP4K4O95819 1239 aaPredicted RBP9.56□□□□□ -0.88
NPHP1-211ENST00000496524 GNAI3P08754 354 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 PLVAPQ9BX97 442 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 PPP6R1Q9UPN7 881 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 CEP120Q8N960 986 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 A6NNZ2 444 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 KIF20AO95235 890 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 MAP3K9P80192 1104 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 ZBTB17Q13105 803 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 TUBB8Q3ZCM7 444 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 CACNA2D4Q7Z3S7 1137 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 RUNDC1Q96C34 613 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 IBSPP21815 317 aaPredicted RBP9.56□□□□□ -0.88
NPHP1-211ENST00000496524 MCM4P33991 863 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 FSD1Q9BTV5 496 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 KRT32Q14532 448 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 ARFGAP3Q9NP61 516 aa9.56□□□□□ -0.88
NPHP1-211ENST00000496524 OPA1O60313 960 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 TOP1P11387 765 aaKnown RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 SEPT14Q6ZU15 432 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC50Q8IVM0 306 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 TUBBP07437 444 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 UBTFL1P0CB47 393 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 AIMP1Q12904 312 aaKnown RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 HLTFQ14527 1009 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 PRKRIP1Q9H875 184 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 EID1Q9Y6B2 187 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC183Q5T5S1 534 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 ZSCAN25Q6NSZ9 544 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC174Q6PII3 467 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 TSG101Q99816 390 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 EBAG9O00559 213 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 FAM114A2Q9NRY5 505 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 OTUD6BQ8N6M0 293 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 PPP1R14CQ8TAE6 165 aa9.55□□□□□ -0.88
NPHP1-211ENST00000496524 PABPN1LA6NDY0 278 aaKnown RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 ELL2O00472 640 aaPredicted RBP9.55□□□□□ -0.88
NPHP1-211ENST00000496524 EVC2Q86UK5 1308 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 CEP135Q66GS9 1140 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 NUP155O75694 1391 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC150Q8NCX0 1101 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 RAB3GAP2Q9H2M9 1393 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 PLEKHH1Q9ULM0 1364 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 NEUROD6Q96NK8 337 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 YEATS4O95619 227 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 CEBPZQ03701 1054 aaKnown RBP9.54□□□□□ -0.88
NPHP1-211ENST00000496524 ZHX3Q9H4I2 956 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 RRP7AQ9Y3A4 280 aaKnown RBP9.54□□□□□ -0.88
NPHP1-211ENST00000496524 CWC25Q9NXE8 425 aaPredicted RBP9.54□□□□□ -0.88
NPHP1-211ENST00000496524 A0A1W2PRG0 241 aa9.54□□□□□ -0.88
NPHP1-211ENST00000496524 PPFIBP2Q8ND30 876 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 MAP7D1Q3KQU3 841 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 GBP7Q8N8V2 638 aaPredicted RBP9.53□□□□□ -0.88
NPHP1-211ENST00000496524 STMN1P16949 149 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
NPHP1-211ENST00000496524 CTNNA2P26232 953 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC171Q6TFL3 1326 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 ATP2B1P20020 1258 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC121Q6ZUS5 278 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 MICALL1Q8N3F8 863 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
NPHP1-211ENST00000496524 EIF2S2P20042 333 aaKnown RBP9.53□□□□□ -0.88
NPHP1-211ENST00000496524 MXRA7P84157 204 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 LMNTD2Q8IXW0 634 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 CACNA2D3Q8IZS8 1091 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 VCX3BQ9H321 246 aa9.53□□□□□ -0.88
NPHP1-211ENST00000496524 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
NPHP1-211ENST00000496524 RIPK4P57078 832 aa9.52□□□□□ -0.88
NPHP1-211ENST00000496524 NUP133Q8WUM0 1156 aa9.52□□□□□ -0.88
NPHP1-211ENST00000496524 PPFIA2O75334 1257 aa9.52□□□□□ -0.88
NPHP1-211ENST00000496524 CETN1Q12798 172 aa9.52□□□□□ -0.88
NPHP1-211ENST00000496524 IQCGQ9H095 443 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms