RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 PARP4Q9UKK3 1724 aaKnown RBP20.61■□□□□ 0.89
RAPGEF3-215ENST00000495953 FCHSD2O94868 740 aa20.6■□□□□ 0.89
RAPGEF3-215ENST00000495953 IL2RBP14784 551 aa20.6■□□□□ 0.89
RAPGEF3-215ENST00000495953 USHBP1Q8N6Y0 703 aa20.6■□□□□ 0.89
RAPGEF3-215ENST00000495953 RAPGEF4Q8WZA2 1011 aa20.6■□□□□ 0.89
RAPGEF3-215ENST00000495953 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
RAPGEF3-215ENST00000495953 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
RAPGEF3-215ENST00000495953 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF3-215ENST00000495953 DISP2A7MBM2 1401 aa20.58■□□□□ 0.88
RAPGEF3-215ENST00000495953 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.88
RAPGEF3-215ENST00000495953 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
RAPGEF3-215ENST00000495953 HMOX1P09601 288 aa20.56■□□□□ 0.88
RAPGEF3-215ENST00000495953 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
RAPGEF3-215ENST00000495953 TNS1Q9HBL0 1735 aaKnown RBP20.56■□□□□ 0.88
RAPGEF3-215ENST00000495953 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
RAPGEF3-215ENST00000495953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAPGEF3-215ENST00000495953 OVOS2A0A0G2JMS6 1433 aa20.54■□□□□ 0.88
RAPGEF3-215ENST00000495953 MEGF6O75095 1541 aa20.54■□□□□ 0.88
RAPGEF3-215ENST00000495953 NEFMP07197 916 aa20.54■□□□□ 0.88
RAPGEF3-215ENST00000495953 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
RAPGEF3-215ENST00000495953 PKD1L3Q7Z443 1732 aa20.53■□□□□ 0.88
RAPGEF3-215ENST00000495953 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
RAPGEF3-215ENST00000495953 EXOC5O00471 708 aa20.52■□□□□ 0.88
RAPGEF3-215ENST00000495953 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
RAPGEF3-215ENST00000495953 PLEKHO1Q53GL0 409 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF3-215ENST00000495953 DEFB132Q7Z7B7 95 aa20.52■□□□□ 0.88
RAPGEF3-215ENST00000495953 SPG7Q9UQ90 795 aa20.52■□□□□ 0.88
RAPGEF3-215ENST00000495953 DDB1Q16531 1140 aa20.51■□□□□ 0.87
RAPGEF3-215ENST00000495953 SF3B2Q13435 895 aaKnown RBP20.5■□□□□ 0.87
RAPGEF3-215ENST00000495953 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
RAPGEF3-215ENST00000495953 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
RAPGEF3-215ENST00000495953 TNS2Q63HR2 1409 aa20.5■□□□□ 0.87
RAPGEF3-215ENST00000495953 FAM9BQ8IZU0 186 aa20.48■□□□□ 0.87
RAPGEF3-215ENST00000495953 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
RAPGEF3-215ENST00000495953 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
RAPGEF3-215ENST00000495953 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
RAPGEF3-215ENST00000495953 GAS2L2Q8NHY3 880 aa20.47■□□□□ 0.87
RAPGEF3-215ENST00000495953 PCDH11XQ9BZA7 1347 aa20.47■□□□□ 0.87
RAPGEF3-215ENST00000495953 PCDH11YQ9BZA8 1340 aa20.47■□□□□ 0.87
RAPGEF3-215ENST00000495953 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
RAPGEF3-215ENST00000495953 PDE3BQ13370 1112 aa20.46■□□□□ 0.87
RAPGEF3-215ENST00000495953 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
RAPGEF3-215ENST00000495953 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
RAPGEF3-215ENST00000495953 MTHFSDQ2M296 383 aaKnown RBP20.43■□□□□ 0.86
RAPGEF3-215ENST00000495953 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
RAPGEF3-215ENST00000495953 HSP90AB1P08238 724 aaKnown RBP20.42■□□□□ 0.86
RAPGEF3-215ENST00000495953 AKAP4Q5JQC9 854 aa20.42■□□□□ 0.86
RAPGEF3-215ENST00000495953 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
RAPGEF3-215ENST00000495953 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
RAPGEF3-215ENST00000495953 DLG5Q8TDM6 1919 aa20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 CYP27B1O15528 508 aa20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 TRIM37O94972 964 aa20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 BAG6P46379 1132 aa20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 NFE2L2Q16236 605 aa20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 DDX54Q8TDD1 881 aaKnown RBP20.41■□□□□ 0.86
RAPGEF3-215ENST00000495953 PHKG2P15735 406 aa20.4■□□□□ 0.86
RAPGEF3-215ENST00000495953 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
RAPGEF3-215ENST00000495953 BCL9O00512 1426 aa20.39■□□□□ 0.85
RAPGEF3-215ENST00000495953 HTATSF1O43719 755 aaKnown RBP20.39■□□□□ 0.85
RAPGEF3-215ENST00000495953 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
RAPGEF3-215ENST00000495953 MARCH10Q8NA82 808 aaPredicted RBP20.39■□□□□ 0.85
RAPGEF3-215ENST00000495953 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
RAPGEF3-215ENST00000495953 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
RAPGEF3-215ENST00000495953 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
RAPGEF3-215ENST00000495953 EN1Q05925 392 aaPredicted RBP20.38■□□□□ 0.85
RAPGEF3-215ENST00000495953 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
RAPGEF3-215ENST00000495953 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
RAPGEF3-215ENST00000495953 PTF1AQ7RTS3 328 aa20.37■□□□□ 0.85
RAPGEF3-215ENST00000495953 DCAF5Q96JK2 942 aa20.37■□□□□ 0.85
RAPGEF3-215ENST00000495953 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
RAPGEF3-215ENST00000495953 APAF1O14727 1248 aa20.36■□□□□ 0.85
RAPGEF3-215ENST00000495953 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
RAPGEF3-215ENST00000495953 FAM196AQ6ZSG2 479 aa20.36■□□□□ 0.85
RAPGEF3-215ENST00000495953 RREB1Q92766 1687 aa20.35■□□□□ 0.85
RAPGEF3-215ENST00000495953 ADAMTS7Q9UKP4 1686 aa20.35■□□□□ 0.85
RAPGEF3-215ENST00000495953 RIPK4P57078 832 aa20.35■□□□□ 0.85
RAPGEF3-215ENST00000495953 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
RAPGEF3-215ENST00000495953 NUP188Q5SRE5 1749 aa20.34■□□□□ 0.85
RAPGEF3-215ENST00000495953 EZH2Q15910 746 aaKnown RBP20.33■□□□□ 0.85
RAPGEF3-215ENST00000495953 ERVV-2B6SEH9 535 aa20.32■□□□□ 0.84
RAPGEF3-215ENST00000495953 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
RAPGEF3-215ENST00000495953 DOT1LQ8TEK3 1739 aa20.31■□□□□ 0.84
RAPGEF3-215ENST00000495953 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-215ENST00000495953 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
RAPGEF3-215ENST00000495953 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
RAPGEF3-215ENST00000495953 ITGB4P16144 1822 aa20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 KDM6AO15550 1401 aaPredicted RBP20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 APBA3O96018 575 aa20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 CEMIPQ8WUJ3 1361 aa20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 TOGARAM1Q9Y4F4 1720 aa20.3■□□□□ 0.84
RAPGEF3-215ENST00000495953 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
RAPGEF3-215ENST00000495953 IL17REQ8NFR9 667 aa20.29■□□□□ 0.84
RAPGEF3-215ENST00000495953 NHSQ6T4R5 1651 aa20.29■□□□□ 0.84
RAPGEF3-215ENST00000495953 CAMKK2Q96RR4 588 aa20.28■□□□□ 0.84
RAPGEF3-215ENST00000495953 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
RAPGEF3-215ENST00000495953 MRC1P22897 1456 aa20.27■□□□□ 0.84
RAPGEF3-215ENST00000495953 LGR6Q9HBX8 967 aa20.27■□□□□ 0.84
RAPGEF3-215ENST00000495953 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms