RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 NSD2O96028 1365 aa18.99■□□□□ 0.63
TFE3-205ENST00000495940 MIER1Q8N108 512 aa18.99■□□□□ 0.63
TFE3-205ENST00000495940 MSH5O43196 834 aa18.97■□□□□ 0.63
TFE3-205ENST00000495940 RGPD2P0DJD1 1756 aa18.96■□□□□ 0.63
TFE3-205ENST00000495940 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
TFE3-205ENST00000495940 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
TFE3-205ENST00000495940 SYTL4Q96C24 671 aaPredicted RBP18.96■□□□□ 0.63
TFE3-205ENST00000495940 TAF1LQ8IZX4 1826 aa18.95■□□□□ 0.62
TFE3-205ENST00000495940 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
TFE3-205ENST00000495940 DDX54Q8TDD1 881 aaKnown RBP18.95■□□□□ 0.62
TFE3-205ENST00000495940 WWC3Q9ULE0 1092 aa18.95■□□□□ 0.62
TFE3-205ENST00000495940 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
TFE3-205ENST00000495940 EVC2Q86UK5 1308 aa18.95■□□□□ 0.62
TFE3-205ENST00000495940 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
TFE3-205ENST00000495940 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
TFE3-205ENST00000495940 ZNF692Q9BU19 519 aaPredicted RBP18.93■□□□□ 0.62
TFE3-205ENST00000495940 WDR90Q96KV7 1748 aa18.92■□□□□ 0.62
TFE3-205ENST00000495940 KIF3CO14782 793 aa18.92■□□□□ 0.62
TFE3-205ENST00000495940 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
TFE3-205ENST00000495940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
TFE3-205ENST00000495940 CCNL1Q9UK58 526 aaPredicted RBP18.92■□□□□ 0.62
TFE3-205ENST00000495940 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
TFE3-205ENST00000495940 NME9Q86XW9 330 aa18.91■□□□□ 0.62
TFE3-205ENST00000495940 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
TFE3-205ENST00000495940 CICQ96RK0 1608 aaPredicted RBP18.89■□□□□ 0.62
TFE3-205ENST00000495940 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
TFE3-205ENST00000495940 MEGF6O75095 1541 aa18.88■□□□□ 0.61
TFE3-205ENST00000495940 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
TFE3-205ENST00000495940 SBNO2Q9Y2G9 1366 aa18.87■□□□□ 0.61
TFE3-205ENST00000495940 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
TFE3-205ENST00000495940 C4BP0C0L5 1744 aa18.86■□□□□ 0.61
TFE3-205ENST00000495940 LTV1Q96GA3 475 aaPredicted RBP18.86■□□□□ 0.61
TFE3-205ENST00000495940 CAPN15O75808 1086 aa18.85■□□□□ 0.61
TFE3-205ENST00000495940 APLP1P51693 650 aa18.85■□□□□ 0.61
TFE3-205ENST00000495940 USP47Q96K76 1375 aa18.84■□□□□ 0.61
TFE3-205ENST00000495940 KIAA1551Q9HCM1 1747 aa18.84■□□□□ 0.61
TFE3-205ENST00000495940 DNAJC5GQ8N7S2 189 aa18.84■□□□□ 0.61
TFE3-205ENST00000495940 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
TFE3-205ENST00000495940 N4BP2Q86UW6 1770 aaPredicted RBP18.81■□□□□ 0.6
TFE3-205ENST00000495940 COL13A1Q5TAT6 717 aaPredicted RBP18.81■□□□□ 0.6
TFE3-205ENST00000495940 SMIM5Q71RC9 77 aa18.8■□□□□ 0.6
TFE3-205ENST00000495940 ITGB4P16144 1822 aa18.79■□□□□ 0.6
TFE3-205ENST00000495940 HTRA3P83110 453 aa18.79■□□□□ 0.6
TFE3-205ENST00000495940 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
TFE3-205ENST00000495940 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
TFE3-205ENST00000495940 IP6K1Q92551 441 aa18.78■□□□□ 0.6
TFE3-205ENST00000495940 KIF13BQ9NQT8 1826 aa18.78■□□□□ 0.6
TFE3-205ENST00000495940 PALLDQ8WX93 1383 aa18.78■□□□□ 0.6
TFE3-205ENST00000495940 ROCK2O75116 1388 aaKnown RBP18.77■□□□□ 0.6
TFE3-205ENST00000495940 PHF14O94880 888 aa18.76■□□□□ 0.59
TFE3-205ENST00000495940 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 PCNTO95613 3336 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 TOMM70O94826 608 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 A0A1W2PP64 1363 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 PXDNLA1KZ92 1463 aa18.75■□□□□ 0.59
TFE3-205ENST00000495940 MAP2P11137 1827 aaKnown RBP18.74■□□□□ 0.59
TFE3-205ENST00000495940 FLAD1Q8NFF5 587 aa18.74■□□□□ 0.59
TFE3-205ENST00000495940 MAP3K19Q56UN5 1328 aa18.74■□□□□ 0.59
TFE3-205ENST00000495940 BRCA1P38398 1863 aaKnown RBP18.73■□□□□ 0.59
TFE3-205ENST00000495940 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
TFE3-205ENST00000495940 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
TFE3-205ENST00000495940 HOXC9P31274 260 aa18.72■□□□□ 0.59
TFE3-205ENST00000495940 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
TFE3-205ENST00000495940 AK7Q96M32 723 aa18.72■□□□□ 0.59
TFE3-205ENST00000495940 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
TFE3-205ENST00000495940 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
TFE3-205ENST00000495940 FBLN1P23142 703 aa18.71■□□□□ 0.59
TFE3-205ENST00000495940 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
TFE3-205ENST00000495940 KLRG1Q96E93 195 aa18.71■□□□□ 0.59
TFE3-205ENST00000495940 SLC12A5Q9H2X9 1139 aa18.71■□□□□ 0.59
TFE3-205ENST00000495940 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
TFE3-205ENST00000495940 TNS4Q8IZW8 715 aa18.7■□□□□ 0.58
TFE3-205ENST00000495940 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
TFE3-205ENST00000495940 MPRIPQ6WCQ1 1025 aa18.68■□□□□ 0.58
TFE3-205ENST00000495940 JMYQ8N9B5 988 aa18.68■□□□□ 0.58
TFE3-205ENST00000495940 NSD3Q9BZ95 1437 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 AMPHP49418 695 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 PRELPP51888 382 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 NBPF6Q5VWK0 638 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 NBPF4Q96M43 638 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 ARFGEF1Q9Y6D6 1849 aa18.67■□□□□ 0.58
TFE3-205ENST00000495940 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
TFE3-205ENST00000495940 KCPQ6ZWJ8 1503 aa18.65■□□□□ 0.58
TFE3-205ENST00000495940 RBM46Q8TBY0 533 aaKnown RBP18.65■□□□□ 0.58
TFE3-205ENST00000495940 BCS1LQ9Y276 419 aa18.65■□□□□ 0.58
TFE3-205ENST00000495940 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
TFE3-205ENST00000495940 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
TFE3-205ENST00000495940 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
TFE3-205ENST00000495940 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.57
TFE3-205ENST00000495940 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
TFE3-205ENST00000495940 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
TFE3-205ENST00000495940 SSFA2P28290 1259 aa18.63■□□□□ 0.57
TFE3-205ENST00000495940 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
TFE3-205ENST00000495940 A0A0G2JLW4 131 aa18.62■□□□□ 0.57
TFE3-205ENST00000495940 MMP10P09238 476 aa18.62■□□□□ 0.57
TFE3-205ENST00000495940 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
TFE3-205ENST00000495940 ARHGAP27Q6ZUM4 889 aa18.62■□□□□ 0.57
TFE3-205ENST00000495940 SIN3AQ96ST3 1273 aa18.62■□□□□ 0.57
TFE3-205ENST00000495940 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms