RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 KAT6BQ8WYB5 2073 aa33.33■■■□□ 2.93
HLA-C-209ENST00000495835 TXNRD1Q16881 649 aa33.33■■■□□ 2.93
HLA-C-209ENST00000495835 MEGF6O75095 1541 aa33.33■■■□□ 2.93
HLA-C-209ENST00000495835 TATP17735 454 aaPredicted RBP33.3■■■□□ 2.92
HLA-C-209ENST00000495835 BTAF1O14981 1849 aa33.3■■■□□ 2.92
HLA-C-209ENST00000495835 SHANK3Q9BYB0 1731 aa33.29■■■□□ 2.92
HLA-C-209ENST00000495835 POLKQ9UBT6 870 aa33.29■■■□□ 2.92
HLA-C-209ENST00000495835 PPM1GO15355 546 aaPredicted RBP33.27■■■□□ 2.92
HLA-C-209ENST00000495835 USHBP1Q8N6Y0 703 aa33.27■■■□□ 2.92
HLA-C-209ENST00000495835 NCAPD2Q15021 1401 aa33.26■■■□□ 2.91
HLA-C-209ENST00000495835 ANO8Q9HCE9 1232 aaPredicted RBP33.23■■■□□ 2.91
HLA-C-209ENST00000495835 KNSTRNQ9Y448 316 aa33.22■■■□□ 2.91
HLA-C-209ENST00000495835 STK32BQ9NY57 414 aa33.21■■■□□ 2.91
HLA-C-209ENST00000495835 PCDH11XQ9BZA7 1347 aa33.21■■■□□ 2.91
HLA-C-209ENST00000495835 PCDH11YQ9BZA8 1340 aa33.21■■■□□ 2.91
HLA-C-209ENST00000495835 KIF7Q2M1P5 1343 aa33.2■■■□□ 2.91
HLA-C-209ENST00000495835 DOT1LQ8TEK3 1739 aa33.19■■■□□ 2.9
HLA-C-209ENST00000495835 PRIM1P49642 420 aaKnown RBP33.19■■■□□ 2.9
HLA-C-209ENST00000495835 SLC15A2Q16348 729 aa33.19■■■□□ 2.9
HLA-C-209ENST00000495835 SLC27A3Q5K4L6 730 aa33.18■■■□□ 2.9
HLA-C-209ENST00000495835 SPON1Q9HCB6 807 aa33.18■■■□□ 2.9
HLA-C-209ENST00000495835 EYA1Q99502 592 aa33.17■■■□□ 2.9
HLA-C-209ENST00000495835 PLEKHG2Q9H7P9 1386 aa33.17■■■□□ 2.9
HLA-C-209ENST00000495835 TNNT2P45379 298 aaPredicted RBP33.16■■■□□ 2.9
HLA-C-209ENST00000495835 MORC1Q86VD1 984 aa33.16■■■□□ 2.9
HLA-C-209ENST00000495835 SYTL4Q96C24 671 aaPredicted RBP33.16■■■□□ 2.9
HLA-C-209ENST00000495835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.16■■■□□ 2.9
HLA-C-209ENST00000495835 PKD1L3Q7Z443 1732 aa33.16■■■□□ 2.9
HLA-C-209ENST00000495835 CASZ1Q86V15 1759 aa33.15■■■□□ 2.9
HLA-C-209ENST00000495835 SPG7Q9UQ90 795 aa33.13■■■□□ 2.89
HLA-C-209ENST00000495835 PAPPAQ13219 1627 aa33.13■■■□□ 2.89
HLA-C-209ENST00000495835 EIF4A2Q14240 407 aaKnown RBP33.12■■■□□ 2.89
HLA-C-209ENST00000495835 CYP27B1O15528 508 aa33.1■■■□□ 2.89
HLA-C-209ENST00000495835 LRRC4BQ9NT99 713 aa33.1■■■□□ 2.89
HLA-C-209ENST00000495835 LY75O60449 1722 aa33.1■■■□□ 2.89
HLA-C-209ENST00000495835 HMGB2P26583 209 aaKnown RBP33.09■■■□□ 2.89
HLA-C-209ENST00000495835 AMER1Q5JTC6 1135 aaPredicted RBP33.09■■■□□ 2.89
HLA-C-209ENST00000495835 NKX1-1Q15270 411 aaPredicted RBP33.08■■■□□ 2.89
HLA-C-209ENST00000495835 IGSF1Q8N6C5 1336 aa33.05■■■□□ 2.88
HLA-C-209ENST00000495835 PER1O15534 1290 aaPredicted RBP33.05■■■□□ 2.88
HLA-C-209ENST00000495835 AKT1S1Q96B36 256 aa33.02■■■□□ 2.88
HLA-C-209ENST00000495835 PPP1R1BQ9UD71 204 aaPredicted RBP33.02■■■□□ 2.88
HLA-C-209ENST00000495835 IFNL2Q8IZJ0 200 aa33.01■■■□□ 2.87
HLA-C-209ENST00000495835 PDGFDQ9GZP0 370 aaPredicted RBP33.01■■■□□ 2.87
HLA-C-209ENST00000495835 QSER1Q2KHR3 1735 aa33.01■■■□□ 2.87
HLA-C-209ENST00000495835 MTFR1LQ9H019 292 aa33■■■□□ 2.87
HLA-C-209ENST00000495835 ITGB4P16144 1822 aa32.99■■■□□ 2.87
HLA-C-209ENST00000495835 ZNF827Q17R98 1081 aa32.98■■■□□ 2.87
HLA-C-209ENST00000495835 CCNL1Q9UK58 526 aaPredicted RBP32.98■■■□□ 2.87
HLA-C-209ENST00000495835 NPC1L1Q9UHC9 1359 aa32.97■■■□□ 2.87
HLA-C-209ENST00000495835 ZBTB7AO95365 584 aa32.97■■■□□ 2.87
HLA-C-209ENST00000495835 MPRIPQ6WCQ1 1025 aa32.97■■■□□ 2.87
HLA-C-209ENST00000495835 TOGARAM1Q9Y4F4 1720 aa32.97■■■□□ 2.87
HLA-C-209ENST00000495835 PHKG2P15735 406 aa32.96■■■□□ 2.87
HLA-C-209ENST00000495835 SLC16A10Q8TF71 515 aa32.96■■■□□ 2.87
HLA-C-209ENST00000495835 SMARCC1Q92922 1105 aaPredicted RBP32.96■■■□□ 2.87
HLA-C-209ENST00000495835 AMOTQ4VCS5 1084 aa32.94■■■□□ 2.86
HLA-C-209ENST00000495835 PTGER2P43116 358 aa32.93■■■□□ 2.86
HLA-C-209ENST00000495835 PLEKHO1Q53GL0 409 aaPredicted RBP32.92■■■□□ 2.86
HLA-C-209ENST00000495835 ATF5Q9Y2D1 282 aaPredicted RBP32.92■■■□□ 2.86
HLA-C-209ENST00000495835 TFCP2L1Q9NZI6 479 aa32.91■■■□□ 2.86
HLA-C-209ENST00000495835 PALLDQ8WX93 1383 aa32.91■■■□□ 2.86
HLA-C-209ENST00000495835 HSP90AB1P08238 724 aaKnown RBP32.9■■■□□ 2.86
HLA-C-209ENST00000495835 IL13P35225 146 aa32.9■■■□□ 2.86
HLA-C-209ENST00000495835 PIGBQ92521 554 aa32.9■■■□□ 2.86
HLA-C-209ENST00000495835 KDRP35968 1356 aa32.89■■■□□ 2.86
HLA-C-209ENST00000495835 KCNQ4P56696 695 aa32.89■■■□□ 2.86
HLA-C-209ENST00000495835 MTHFSP49914 203 aa32.88■■■□□ 2.85
HLA-C-209ENST00000495835 SGIP1Q9BQI5 828 aa32.88■■■□□ 2.85
HLA-C-209ENST00000495835 PNPLA7Q6ZV29 1317 aa32.87■■■□□ 2.85
HLA-C-209ENST00000495835 TMOD3Q9NYL9 352 aa32.87■■■□□ 2.85
HLA-C-209ENST00000495835 CC2D1BQ5T0F9 858 aaKnown RBP32.86■■■□□ 2.85
HLA-C-209ENST00000495835 C5P01031 1676 aa32.85■■■□□ 2.85
HLA-C-209ENST00000495835 ERVV-2B6SEH9 535 aa32.85■■■□□ 2.85
HLA-C-209ENST00000495835 DCAF5Q96JK2 942 aa32.85■■■□□ 2.85
HLA-C-209ENST00000495835 TAF1LQ8IZX4 1826 aa32.85■■■□□ 2.85
HLA-C-209ENST00000495835 TUBGCP6Q96RT7 1819 aa32.85■■■□□ 2.85
HLA-C-209ENST00000495835 SULT6B1Q6IMI4 303 aa32.84■■■□□ 2.85
HLA-C-209ENST00000495835 COL24A1Q17RW2 1714 aa32.82■■■□□ 2.84
HLA-C-209ENST00000495835 AEBP1Q8IUX7 1158 aa32.81■■■□□ 2.84
HLA-C-209ENST00000495835 FLAD1Q8NFF5 587 aa32.81■■■□□ 2.84
HLA-C-209ENST00000495835 ZNF530Q6P9A1 599 aaPredicted RBP32.8■■■□□ 2.84
HLA-C-209ENST00000495835 DCAF8L1A6NGE4 600 aa32.79■■■□□ 2.84
HLA-C-209ENST00000495835 C1orf141Q5JVX7 400 aa32.78■■■□□ 2.84
HLA-C-209ENST00000495835 ARXQ96QS3 562 aa32.78■■■□□ 2.84
HLA-C-209ENST00000495835 DIAPH1O60610 1272 aaKnown RBP32.77■■■□□ 2.84
HLA-C-209ENST00000495835 LOC102724428A0A0B4J2F2 783 aa32.76■■■□□ 2.83
HLA-C-209ENST00000495835 SIK1P57059 783 aa32.76■■■□□ 2.83
HLA-C-209ENST00000495835 MAP3K5Q99683 1374 aa32.75■■■□□ 2.83
HLA-C-209ENST00000495835 POLD1P28340 1107 aa32.75■■■□□ 2.83
HLA-C-209ENST00000495835 ASAP1Q9ULH1 1129 aa32.75■■■□□ 2.83
HLA-C-209ENST00000495835 C4BP0C0L5 1744 aa32.74■■■□□ 2.83
HLA-C-209ENST00000495835 ATG3Q9NT62 314 aa32.74■■■□□ 2.83
HLA-C-209ENST00000495835 COL23A1Q86Y22 540 aaPredicted RBP32.73■■■□□ 2.83
HLA-C-209ENST00000495835 SYT17Q9BSW7 474 aa32.73■■■□□ 2.83
HLA-C-209ENST00000495835 FHDC1Q9C0D6 1143 aaPredicted RBP32.73■■■□□ 2.83
HLA-C-209ENST00000495835 ZNF831Q5JPB2 1677 aa32.72■■■□□ 2.83
HLA-C-209ENST00000495835 KDM6AO15550 1401 aaPredicted RBP32.71■■■□□ 2.83
HLA-C-209ENST00000495835 CABP4P57796 275 aa32.71■■■□□ 2.83
HLA-C-209ENST00000495835 AK7Q96M32 723 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms