RNA–Protein interactions for RNA: ENST00000495822.1

CTSL-206, Transcript of cathepsin L, humanhuman

TSL 1 (best)

Gene CTSL, Length 988 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-206ENST00000495822 SLC27A3Q5K4L6 730 aa20.66■□□□□ 0.9
CTSL-206ENST00000495822 DOT1LQ8TEK3 1739 aa20.65■□□□□ 0.9
CTSL-206ENST00000495822 ANKRD26Q9UPS8 1709 aa20.65■□□□□ 0.9
CTSL-206ENST00000495822 HSP90AB2PQ58FF8 381 aa20.65■□□□□ 0.9
CTSL-206ENST00000495822 RAPGEF4Q8WZA2 1011 aa20.65■□□□□ 0.9
CTSL-206ENST00000495822 PDGFDQ9GZP0 370 aaPredicted RBP20.64■□□□□ 0.89
CTSL-206ENST00000495822 EIF4G2P78344 907 aaKnown RBP eCLIP20.63■□□□□ 0.89
CTSL-206ENST00000495822 MTFR1LQ9H019 292 aa20.63■□□□□ 0.89
CTSL-206ENST00000495822 NCAPD2Q15021 1401 aa20.62■□□□□ 0.89
CTSL-206ENST00000495822 NSD2O96028 1365 aa20.62■□□□□ 0.89
CTSL-206ENST00000495822 ZBTB7AO95365 584 aa20.62■□□□□ 0.89
CTSL-206ENST00000495822 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
CTSL-206ENST00000495822 PTGER2P43116 358 aa20.62■□□□□ 0.89
CTSL-206ENST00000495822 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
CTSL-206ENST00000495822 LRRC4BQ9NT99 713 aa20.62■□□□□ 0.89
CTSL-206ENST00000495822 USHBP1Q8N6Y0 703 aa20.61■□□□□ 0.89
CTSL-206ENST00000495822 EMILIN1Q9Y6C2 1016 aa20.61■□□□□ 0.89
CTSL-206ENST00000495822 PCDH11XQ9BZA7 1347 aa20.6■□□□□ 0.89
CTSL-206ENST00000495822 PCDH11YQ9BZA8 1340 aa20.6■□□□□ 0.89
CTSL-206ENST00000495822 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
CTSL-206ENST00000495822 SYTL4Q96C24 671 aaPredicted RBP20.6■□□□□ 0.89
CTSL-206ENST00000495822 LY75O60449 1722 aa20.6■□□□□ 0.89
CTSL-206ENST00000495822 QSER1Q2KHR3 1735 aa20.6■□□□□ 0.89
CTSL-206ENST00000495822 WASHC2AQ641Q2 1341 aa20.59■□□□□ 0.89
CTSL-206ENST00000495822 ZNF827Q17R98 1081 aa20.58■□□□□ 0.89
CTSL-206ENST00000495822 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
CTSL-206ENST00000495822 HSPA5P11021 654 aaKnown RBP20.57■□□□□ 0.88
CTSL-206ENST00000495822 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
CTSL-206ENST00000495822 SGIP1Q9BQI5 828 aa20.57■□□□□ 0.88
CTSL-206ENST00000495822 ATF5Q9Y2D1 282 aaPredicted RBP20.57■□□□□ 0.88
CTSL-206ENST00000495822 MAP2P11137 1827 aaKnown RBP20.57■□□□□ 0.88
CTSL-206ENST00000495822 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
CTSL-206ENST00000495822 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
CTSL-206ENST00000495822 SLC16A10Q8TF71 515 aa20.55■□□□□ 0.88
CTSL-206ENST00000495822 PLEKHG2Q9H7P9 1386 aa20.55■□□□□ 0.88
CTSL-206ENST00000495822 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
CTSL-206ENST00000495822 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
CTSL-206ENST00000495822 POLKQ9UBT6 870 aa20.54■□□□□ 0.88
CTSL-206ENST00000495822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.882e-6■□□□□ 11.1
CTSL-206ENST00000495822 MAP3K5Q99683 1374 aa20.52■□□□□ 0.88
CTSL-206ENST00000495822 CYP27B1O15528 508 aa20.52■□□□□ 0.88
CTSL-206ENST00000495822 CCNL1Q9UK58 526 aaPredicted RBP20.52■□□□□ 0.88
CTSL-206ENST00000495822 PNPLA7Q6ZV29 1317 aa20.51■□□□□ 0.87
CTSL-206ENST00000495822 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
CTSL-206ENST00000495822 EYA1Q99502 592 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 PANK3Q9H999 370 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 SPG7Q9UQ90 795 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 TUBGCP6Q96RT7 1819 aa20.5■□□□□ 0.87
CTSL-206ENST00000495822 ARXQ96QS3 562 aa20.49■□□□□ 0.87
CTSL-206ENST00000495822 SYT17Q9BSW7 474 aa20.49■□□□□ 0.87
CTSL-206ENST00000495822 FHDC1Q9C0D6 1143 aaPredicted RBP20.49■□□□□ 0.87
CTSL-206ENST00000495822 TOGARAM1Q9Y4F4 1720 aa20.48■□□□□ 0.87
CTSL-206ENST00000495822 KCNQ4P56696 695 aa20.47■□□□□ 0.87
CTSL-206ENST00000495822 SMARCC1Q92922 1105 aaPredicted RBP20.47■□□□□ 0.87
CTSL-206ENST00000495822 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
CTSL-206ENST00000495822 ITGB4P16144 1822 aa20.46■□□□□ 0.87
CTSL-206ENST00000495822 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
CTSL-206ENST00000495822 C5P01031 1676 aa20.45■□□□□ 0.86
CTSL-206ENST00000495822 YY1P25490 414 aa20.45■□□□□ 0.86
CTSL-206ENST00000495822 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
CTSL-206ENST00000495822 IGSF1Q8N6C5 1336 aa20.45■□□□□ 0.86
CTSL-206ENST00000495822 POLD1P28340 1107 aa20.44■□□□□ 0.86
CTSL-206ENST00000495822 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
CTSL-206ENST00000495822 TAF1LQ8IZX4 1826 aa20.43■□□□□ 0.86
CTSL-206ENST00000495822 IFNL2Q8IZJ0 200 aa20.42■□□□□ 0.86
CTSL-206ENST00000495822 PHKG2P15735 406 aa20.41■□□□□ 0.86
CTSL-206ENST00000495822 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
CTSL-206ENST00000495822 FLAD1Q8NFF5 587 aa20.41■□□□□ 0.86
CTSL-206ENST00000495822 PIGBQ92521 554 aa20.41■□□□□ 0.86
CTSL-206ENST00000495822 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
CTSL-206ENST00000495822 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
CTSL-206ENST00000495822 TMOD3Q9NYL9 352 aa20.39■□□□□ 0.85
CTSL-206ENST00000495822 C4BP0C0L5 1744 aa20.39■□□□□ 0.85
CTSL-206ENST00000495822 KIF7Q2M1P5 1343 aa20.37■□□□□ 0.85
CTSL-206ENST00000495822 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
CTSL-206ENST00000495822 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
CTSL-206ENST00000495822 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
CTSL-206ENST00000495822 MSH5O43196 834 aa20.35■□□□□ 0.85
CTSL-206ENST00000495822 SIK1P57059 783 aa20.35■□□□□ 0.85
CTSL-206ENST00000495822 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
CTSL-206ENST00000495822 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
CTSL-206ENST00000495822 UTRNP46939 3433 aa20.34■□□□□ 0.85
CTSL-206ENST00000495822 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
CTSL-206ENST00000495822 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
CTSL-206ENST00000495822 AK7Q96M32 723 aa20.34■□□□□ 0.85
CTSL-206ENST00000495822 KDRP35968 1356 aa20.34■□□□□ 0.85
CTSL-206ENST00000495822 UBR3Q6ZT12 1888 aa20.33■□□□□ 0.85
CTSL-206ENST00000495822 CHD4Q14839 1912 aa20.33■□□□□ 0.84
CTSL-206ENST00000495822 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
CTSL-206ENST00000495822 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
CTSL-206ENST00000495822 SSFA2P28290 1259 aa20.31■□□□□ 0.84
CTSL-206ENST00000495822 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
CTSL-206ENST00000495822 ATG3Q9NT62 314 aa20.3■□□□□ 0.84
CTSL-206ENST00000495822 PER1O15534 1290 aaPredicted RBP20.29■□□□□ 0.84
CTSL-206ENST00000495822 IL13P35225 146 aa20.29■□□□□ 0.84
CTSL-206ENST00000495822 ZNF530Q6P9A1 599 aaPredicted RBP20.29■□□□□ 0.84
CTSL-206ENST00000495822 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
CTSL-206ENST00000495822 KDM6AO15550 1401 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms