RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.82
VPS52-221ENST00000495755 RAPGEF4Q8WZA2 1011 aa9.95□□□□□ -0.82
VPS52-221ENST00000495755 PPM1GO15355 546 aaPredicted RBP9.94□□□□□ -0.82
VPS52-221ENST00000495755 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
VPS52-221ENST00000495755 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
VPS52-221ENST00000495755 SLC15A2Q16348 729 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 PDGFDQ9GZP0 370 aaPredicted RBP9.93□□□□□ -0.82
VPS52-221ENST00000495755 LRRC4BQ9NT99 713 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 STK32BQ9NY57 414 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 ANKRD26Q9UPS8 1709 aa9.93□□□□□ -0.82
VPS52-221ENST00000495755 NSD2O96028 1365 aa9.92□□□□□ -0.82
VPS52-221ENST00000495755 BTAF1O14981 1849 aa9.92□□□□□ -0.82
VPS52-221ENST00000495755 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
VPS52-221ENST00000495755 EYA1Q99502 592 aa9.92□□□□□ -0.82
VPS52-221ENST00000495755 SPON1Q9HCB6 807 aa9.92□□□□□ -0.82
VPS52-221ENST00000495755 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
VPS52-221ENST00000495755 CYP27B1O15528 508 aa9.91□□□□□ -0.82
VPS52-221ENST00000495755 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
VPS52-221ENST00000495755 SLC27A3Q5K4L6 730 aa9.91□□□□□ -0.82
VPS52-221ENST00000495755 SYTL4Q96C24 671 aaPredicted RBP9.91□□□□□ -0.82
VPS52-221ENST00000495755 MAP2P11137 1827 aaKnown RBP9.91□□□□□ -0.82
VPS52-221ENST00000495755 CASZ1Q86V15 1759 aa9.91□□□□□ -0.82
VPS52-221ENST00000495755 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
VPS52-221ENST00000495755 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
VPS52-221ENST00000495755 PAPPAQ13219 1627 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 ZBTB7AO95365 584 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
VPS52-221ENST00000495755 ZNF827Q17R98 1081 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
VPS52-221ENST00000495755 MORC1Q86VD1 984 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.83
VPS52-221ENST00000495755 KNSTRNQ9Y448 316 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 DOT1LQ8TEK3 1739 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 KAT6BQ8WYB5 2073 aa9.89□□□□□ -0.83
VPS52-221ENST00000495755 PER1O15534 1290 aaPredicted RBP9.88□□□□□ -0.83
VPS52-221ENST00000495755 PTGER2P43116 358 aa9.88□□□□□ -0.83
VPS52-221ENST00000495755 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
VPS52-221ENST00000495755 IGSF1Q8N6C5 1336 aa9.87□□□□□ -0.83
VPS52-221ENST00000495755 KCNQ4P56696 695 aa9.87□□□□□ -0.83
VPS52-221ENST00000495755 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
VPS52-221ENST00000495755 MTFR1LQ9H019 292 aa9.87□□□□□ -0.83
VPS52-221ENST00000495755 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
VPS52-221ENST00000495755 ATF5Q9Y2D1 282 aaPredicted RBP9.87□□□□□ -0.83
VPS52-221ENST00000495755 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
VPS52-221ENST00000495755 LY75O60449 1722 aa9.86□□□□□ -0.83
VPS52-221ENST00000495755 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
VPS52-221ENST00000495755 CCNL1Q9UK58 526 aaPredicted RBP9.86□□□□□ -0.83
VPS52-221ENST00000495755 PLEKHG2Q9H7P9 1386 aa9.86□□□□□ -0.83
VPS52-221ENST00000495755 PHKG2P15735 406 aa9.85□□□□□ -0.83
VPS52-221ENST00000495755 IFNL2Q8IZJ0 200 aa9.85□□□□□ -0.83
VPS52-221ENST00000495755 PIGBQ92521 554 aa9.85□□□□□ -0.83
VPS52-221ENST00000495755 PNPLA7Q6ZV29 1317 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 IL13P35225 146 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 SLC16A10Q8TF71 515 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 TFCP2L1Q9NZI6 479 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 PALLDQ8WX93 1383 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 TOGARAM1Q9Y4F4 1720 aa9.84□□□□□ -0.83
VPS52-221ENST00000495755 AEBP1Q8IUX7 1158 aa9.83□□□□□ -0.84
VPS52-221ENST00000495755 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
VPS52-221ENST00000495755 QSER1Q2KHR3 1735 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 HMGB2P26583 209 aaKnown RBP9.82□□□□□ -0.84
VPS52-221ENST00000495755 MTHFSP49914 203 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 AMOTQ4VCS5 1084 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 PLEKHO1Q53GL0 409 aaPredicted RBP9.82□□□□□ -0.84
VPS52-221ENST00000495755 ARXQ96QS3 562 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 NPC1L1Q9UHC9 1359 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 ITGB4P16144 1822 aa9.82□□□□□ -0.84
VPS52-221ENST00000495755 KDRP35968 1356 aa9.81□□□□□ -0.84
VPS52-221ENST00000495755 ERVV-2B6SEH9 535 aa9.81□□□□□ -0.84
VPS52-221ENST00000495755 CC2D1BQ5T0F9 858 aaKnown RBP9.81□□□□□ -0.84
VPS52-221ENST00000495755 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
VPS52-221ENST00000495755 COL23A1Q86Y22 540 aaPredicted RBP9.81□□□□□ -0.84
VPS52-221ENST00000495755 DCAF5Q96JK2 942 aa9.81□□□□□ -0.84
VPS52-221ENST00000495755 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
VPS52-221ENST00000495755 ASAP1Q9ULH1 1129 aa9.81□□□□□ -0.84
VPS52-221ENST00000495755 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
VPS52-221ENST00000495755 ZNF530Q6P9A1 599 aaPredicted RBP9.8□□□□□ -0.84
VPS52-221ENST00000495755 SYT17Q9BSW7 474 aa9.8□□□□□ -0.84
VPS52-221ENST00000495755 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
VPS52-221ENST00000495755 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
VPS52-221ENST00000495755 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 UTRNP46939 3433 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 COL24A1Q17RW2 1714 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 MAP3K5Q99683 1374 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 LOC102724428A0A0B4J2F2 783 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 SIK1P57059 783 aa9.79□□□□□ -0.84
VPS52-221ENST00000495755 C5P01031 1676 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 POLD1P28340 1107 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 ITPK1Q13572 414 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 AMIGO3Q86WK7 504 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 LINC00116Q8NCU8 138 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
VPS52-221ENST00000495755 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
VPS52-221ENST00000495755 TAF1LQ8IZX4 1826 aa9.77□□□□□ -0.84
VPS52-221ENST00000495755 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
VPS52-221ENST00000495755 MSH5O43196 834 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms