RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
COL1A1-209ENST00000495677 PELP1Q8IZL8 1130 aaKnown RBP19.17■□□□□ 0.66
COL1A1-209ENST00000495677 NSD2O96028 1365 aa19.17■□□□□ 0.66
COL1A1-209ENST00000495677 YBX3P16989 372 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL1A1-209ENST00000495677 SLC12A5Q9H2X9 1139 aa19.16■□□□□ 0.66
COL1A1-209ENST00000495677 TERF2IPQ9NYB0 399 aa19.15■□□□□ 0.66
COL1A1-209ENST00000495677 KCNQ4P56696 695 aa19.14■□□□□ 0.65
COL1A1-209ENST00000495677 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
COL1A1-209ENST00000495677 C5P01031 1676 aa19.14■□□□□ 0.65
COL1A1-209ENST00000495677 ZCRB1Q8TBF4 217 aaKnown RBP19.13■□□□□ 0.65
COL1A1-209ENST00000495677 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
COL1A1-209ENST00000495677 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
COL1A1-209ENST00000495677 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
COL1A1-209ENST00000495677 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
COL1A1-209ENST00000495677 CCNL1Q9UK58 526 aaPredicted RBP19.12■□□□□ 0.65
COL1A1-209ENST00000495677 CD2APQ9Y5K6 639 aa19.12■□□□□ 0.65
COL1A1-209ENST00000495677 USP47Q96K76 1375 aa19.1■□□□□ 0.65
COL1A1-209ENST00000495677 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
COL1A1-209ENST00000495677 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
COL1A1-209ENST00000495677 ATP10DQ9P241 1426 aa19.09■□□□□ 0.65
COL1A1-209ENST00000495677 HOXC9P31274 260 aa19.09■□□□□ 0.65
COL1A1-209ENST00000495677 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
COL1A1-209ENST00000495677 ITGB4P16144 1822 aa19.09■□□□□ 0.65
COL1A1-209ENST00000495677 MAP3K19Q56UN5 1328 aa19.08■□□□□ 0.65
COL1A1-209ENST00000495677 ADCY9O60503 1353 aa19.07■□□□□ 0.64
COL1A1-209ENST00000495677 MEGF6O75095 1541 aa19.07■□□□□ 0.64
COL1A1-209ENST00000495677 CARD11Q9BXL7 1154 aa19.07■□□□□ 0.64
COL1A1-209ENST00000495677 UBR3Q6ZT12 1888 aa19.07■□□□□ 0.64
COL1A1-209ENST00000495677 MSH5O43196 834 aa19.06■□□□□ 0.64
COL1A1-209ENST00000495677 HSPA6P17066 643 aa19.06■□□□□ 0.64
COL1A1-209ENST00000495677 COG3Q96JB2 828 aa19.06■□□□□ 0.64
COL1A1-209ENST00000495677 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
COL1A1-209ENST00000495677 AMPHP49418 695 aa19.05■□□□□ 0.64
COL1A1-209ENST00000495677 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
COL1A1-209ENST00000495677 RTL1A6NKG5 1358 aa19.04■□□□□ 0.64
COL1A1-209ENST00000495677 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
COL1A1-209ENST00000495677 C4BP0C0L5 1744 aa19.03■□□□□ 0.64
COL1A1-209ENST00000495677 NBPF6Q5VWK0 638 aa19.02■□□□□ 0.64
COL1A1-209ENST00000495677 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
COL1A1-209ENST00000495677 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
COL1A1-209ENST00000495677 TOGARAM1Q9Y4F4 1720 aa19.01■□□□□ 0.63
COL1A1-209ENST00000495677 FBLN1P23142 703 aa19.01■□□□□ 0.63
COL1A1-209ENST00000495677 MAP2P11137 1827 aaKnown RBP19.01■□□□□ 0.63
COL1A1-209ENST00000495677 RAPGEF4Q8WZA2 1011 aa19■□□□□ 0.63
COL1A1-209ENST00000495677 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
COL1A1-209ENST00000495677 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
COL1A1-209ENST00000495677 TATP17735 454 aaPredicted RBP18.98■□□□□ 0.63
COL1A1-209ENST00000495677 PCDH11XQ9BZA7 1347 aa18.98■□□□□ 0.63
COL1A1-209ENST00000495677 PCDH11YQ9BZA8 1340 aa18.98■□□□□ 0.63
COL1A1-209ENST00000495677 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
COL1A1-209ENST00000495677 TESK2Q96S53 571 aa18.97■□□□□ 0.63
COL1A1-209ENST00000495677 NSD3Q9BZ95 1437 aa18.97■□□□□ 0.63
COL1A1-209ENST00000495677 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
COL1A1-209ENST00000495677 SMG6Q86US8 1419 aaKnown RBP18.96■□□□□ 0.63
COL1A1-209ENST00000495677 INSRP06213 1382 aa18.95■□□□□ 0.62
COL1A1-209ENST00000495677 KIF24Q5T7B8 1368 aa18.95■□□□□ 0.62
COL1A1-209ENST00000495677 KIF3CO14782 793 aa18.95■□□□□ 0.62
COL1A1-209ENST00000495677 FYB1O15117 783 aa18.95■□□□□ 0.62
COL1A1-209ENST00000495677 CICQ96RK0 1608 aaPredicted RBP18.95■□□□□ 0.62
COL1A1-209ENST00000495677 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
COL1A1-209ENST00000495677 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
COL1A1-209ENST00000495677 MPRIPQ6WCQ1 1025 aa18.94■□□□□ 0.62
COL1A1-209ENST00000495677 CYP27B1O15528 508 aa18.93■□□□□ 0.62
COL1A1-209ENST00000495677 SSFA2P28290 1259 aa18.93■□□□□ 0.62
COL1A1-209ENST00000495677 NKX1-1Q15270 411 aaPredicted RBP18.93■□□□□ 0.62
COL1A1-209ENST00000495677 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
COL1A1-209ENST00000495677 AK7Q96M32 723 aa18.93■□□□□ 0.62
COL1A1-209ENST00000495677 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
COL1A1-209ENST00000495677 AMIGO3Q86WK7 504 aa18.92■□□□□ 0.62
COL1A1-209ENST00000495677 ZNF526Q8TF50 670 aaPredicted RBP18.92■□□□□ 0.62
COL1A1-209ENST00000495677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.91■□□□□ 0.62
COL1A1-209ENST00000495677 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
COL1A1-209ENST00000495677 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
COL1A1-209ENST00000495677 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
COL1A1-209ENST00000495677 PIGBQ92521 554 aa18.9■□□□□ 0.62
COL1A1-209ENST00000495677 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
COL1A1-209ENST00000495677 N4BP2Q86UW6 1770 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-209ENST00000495677 APLP1P51693 650 aa18.89■□□□□ 0.61
COL1A1-209ENST00000495677 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.61
COL1A1-209ENST00000495677 FLT4P35916 1363 aa18.89■□□□□ 0.61
COL1A1-209ENST00000495677 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
COL1A1-209ENST00000495677 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
COL1A1-209ENST00000495677 SIK1P57059 783 aa18.87■□□□□ 0.61
COL1A1-209ENST00000495677 ZNF831Q5JPB2 1677 aa18.87■□□□□ 0.61
COL1A1-209ENST00000495677 DNAJC5GQ8N7S2 189 aa18.87■□□□□ 0.61
COL1A1-209ENST00000495677 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
COL1A1-209ENST00000495677 TOMM70O94826 608 aa18.86■□□□□ 0.61
COL1A1-209ENST00000495677 TGFB2P61812 414 aa18.86■□□□□ 0.61
COL1A1-209ENST00000495677 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.61
COL1A1-209ENST00000495677 PHF14O94880 888 aa18.85■□□□□ 0.61
COL1A1-209ENST00000495677 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
COL1A1-209ENST00000495677 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
COL1A1-209ENST00000495677 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
COL1A1-209ENST00000495677 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
COL1A1-209ENST00000495677 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
COL1A1-209ENST00000495677 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
COL1A1-209ENST00000495677 PXDNLA1KZ92 1463 aa18.82■□□□□ 0.6
COL1A1-209ENST00000495677 WWC3Q9ULE0 1092 aa18.81■□□□□ 0.6
COL1A1-209ENST00000495677 SBF1O95248 1867 aa18.8■□□□□ 0.6
COL1A1-209ENST00000495677 GNPATO15228 680 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms