RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
PTPN18-216ENST00000495400 NBPF6Q5VWK0 638 aa20.59■□□□□ 0.89
PTPN18-216ENST00000495400 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
PTPN18-216ENST00000495400 NBPF4Q96M43 638 aa20.59■□□□□ 0.89
PTPN18-216ENST00000495400 FHDC1Q9C0D6 1143 aaPredicted RBP20.59■□□□□ 0.89
PTPN18-216ENST00000495400 QSER1Q2KHR3 1735 aa20.58■□□□□ 0.89
PTPN18-216ENST00000495400 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
PTPN18-216ENST00000495400 SYT17Q9BSW7 474 aa20.58■□□□□ 0.89
PTPN18-216ENST00000495400 SMG6Q86US8 1419 aaKnown RBP20.58■□□□□ 0.88
PTPN18-216ENST00000495400 CGNL1Q0VF96 1302 aa20.56■□□□□ 0.88
PTPN18-216ENST00000495400 LY75O60449 1722 aa20.56■□□□□ 0.88
PTPN18-216ENST00000495400 USHBP1Q8N6Y0 703 aa20.56■□□□□ 0.88
PTPN18-216ENST00000495400 RAPGEF4Q8WZA2 1011 aa20.56■□□□□ 0.88
PTPN18-216ENST00000495400 ARXQ96QS3 562 aa20.56■□□□□ 0.88
PTPN18-216ENST00000495400 TIMELESSQ9UNS1 1208 aa20.55■□□□□ 0.88
PTPN18-216ENST00000495400 NSD2O96028 1365 aa20.55■□□□□ 0.88
PTPN18-216ENST00000495400 INSRP06213 1382 aa20.55■□□□□ 0.88
PTPN18-216ENST00000495400 TATP17735 454 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-216ENST00000495400 HSP90AB2PQ58FF8 381 aa20.54■□□□□ 0.88
PTPN18-216ENST00000495400 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
PTPN18-216ENST00000495400 KIF24Q5T7B8 1368 aa20.54■□□□□ 0.88
PTPN18-216ENST00000495400 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
PTPN18-216ENST00000495400 KCNQ4P56696 695 aa20.53■□□□□ 0.88
PTPN18-216ENST00000495400 CARD14Q9BXL6 1004 aa20.53■□□□□ 0.88
PTPN18-216ENST00000495400 FLT4P35916 1363 aa20.53■□□□□ 0.88
PTPN18-216ENST00000495400 TFCP2L1Q9NZI6 479 aa20.52■□□□□ 0.88
PTPN18-216ENST00000495400 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
PTPN18-216ENST00000495400 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
PTPN18-216ENST00000495400 MAP3K5Q99683 1374 aa20.5■□□□□ 0.87
PTPN18-216ENST00000495400 CCNL1Q9UK58 526 aaPredicted RBP20.5■□□□□ 0.87
PTPN18-216ENST00000495400 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
PTPN18-216ENST00000495400 PCDH11XQ9BZA7 1347 aa20.49■□□□□ 0.87
PTPN18-216ENST00000495400 PCDH11YQ9BZA8 1340 aa20.49■□□□□ 0.87
PTPN18-216ENST00000495400 CHD4Q14839 1912 aa20.49■□□□□ 0.87
PTPN18-216ENST00000495400 POLD1P28340 1107 aa20.48■□□□□ 0.87
PTPN18-216ENST00000495400 EMILIN1Q9Y6C2 1016 aa20.48■□□□□ 0.87
PTPN18-216ENST00000495400 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
PTPN18-216ENST00000495400 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
PTPN18-216ENST00000495400 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
PTPN18-216ENST00000495400 CYP27B1O15528 508 aa20.44■□□□□ 0.86
PTPN18-216ENST00000495400 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
PTPN18-216ENST00000495400 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
PTPN18-216ENST00000495400 ITGB4P16144 1822 aa20.43■□□□□ 0.86
PTPN18-216ENST00000495400 HMGB2P26583 209 aaKnown RBP20.43■□□□□ 0.86
PTPN18-216ENST00000495400 KLHL34Q8N239 644 aa20.43■□□□□ 0.86
PTPN18-216ENST00000495400 C5P01031 1676 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 TAF1LQ8IZX4 1826 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 MSH5O43196 834 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 MPRIPQ6WCQ1 1025 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 NCAPD2Q15021 1401 aa20.42■□□□□ 0.86
PTPN18-216ENST00000495400 GPR162Q16538 588 aa20.41■□□□□ 0.86
PTPN18-216ENST00000495400 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
PTPN18-216ENST00000495400 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
PTPN18-216ENST00000495400 ZNF784Q8NCA9 323 aaPredicted RBP20.4■□□□□ 0.86
PTPN18-216ENST00000495400 PALLDQ8WX93 1383 aa20.4■□□□□ 0.86
PTPN18-216ENST00000495400 SMARCC1Q92922 1105 aaPredicted RBP20.39■□□□□ 0.85
PTPN18-216ENST00000495400 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
PTPN18-216ENST00000495400 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
PTPN18-216ENST00000495400 NKX1-1Q15270 411 aaPredicted RBP20.38■□□□□ 0.85
PTPN18-216ENST00000495400 EYA1Q99502 592 aa20.38■□□□□ 0.85
PTPN18-216ENST00000495400 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
PTPN18-216ENST00000495400 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
PTPN18-216ENST00000495400 PIGBQ92521 554 aa20.36■□□□□ 0.85
PTPN18-216ENST00000495400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTPN18-216ENST00000495400 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
PTPN18-216ENST00000495400 NLGN2Q8NFZ4 835 aa20.35■□□□□ 0.85
PTPN18-216ENST00000495400 C4BP0C0L5 1744 aa20.34■□□□□ 0.85
PTPN18-216ENST00000495400 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
PTPN18-216ENST00000495400 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
PTPN18-216ENST00000495400 UTRNP46939 3433 aa20.33■□□□□ 0.84
PTPN18-216ENST00000495400 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
PTPN18-216ENST00000495400 TNNT2P45379 298 aaPredicted RBP20.32■□□□□ 0.84
PTPN18-216ENST00000495400 EIF4A2Q14240 407 aaKnown RBP20.32■□□□□ 0.84
PTPN18-216ENST00000495400 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
PTPN18-216ENST00000495400 AK7Q96M32 723 aa20.32■□□□□ 0.84
PTPN18-216ENST00000495400 UBR3Q6ZT12 1888 aa20.31■□□□□ 0.84
PTPN18-216ENST00000495400 PHKG2P15735 406 aa20.3■□□□□ 0.84
PTPN18-216ENST00000495400 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
PTPN18-216ENST00000495400 PANK3Q9H999 370 aa20.29■□□□□ 0.84
PTPN18-216ENST00000495400 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
PTPN18-216ENST00000495400 SIK1P57059 783 aa20.28■□□□□ 0.84
PTPN18-216ENST00000495400 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
PTPN18-216ENST00000495400 GRIN3BO60391 1043 aa20.27■□□□□ 0.84
PTPN18-216ENST00000495400 ASAP1Q9ULH1 1129 aa20.27■□□□□ 0.84
PTPN18-216ENST00000495400 CD2APQ9Y5K6 639 aa20.27■□□□□ 0.84
PTPN18-216ENST00000495400 PHF14O94880 888 aa20.26■□□□□ 0.83
PTPN18-216ENST00000495400 YBX3P16989 372 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPN18-216ENST00000495400 AMIGO3Q86WK7 504 aa20.26■□□□□ 0.83
PTPN18-216ENST00000495400 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
PTPN18-216ENST00000495400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.25■□□□□ 0.83
PTPN18-216ENST00000495400 SSFA2P28290 1259 aa20.25■□□□□ 0.83
PTPN18-216ENST00000495400 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
PTPN18-216ENST00000495400 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
PTPN18-216ENST00000495400 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
PTPN18-216ENST00000495400 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
PTPN18-216ENST00000495400 ITPK1Q13572 414 aa20.22■□□□□ 0.83
PTPN18-216ENST00000495400 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
PTPN18-216ENST00000495400 MORC1Q86VD1 984 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms