RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 EYA1Q99502 592 aa16.68■□□□□ 0.26
SMIM11A-207ENST00000495363 BCL9O00512 1426 aa16.68■□□□□ 0.26
SMIM11A-207ENST00000495363 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
SMIM11A-207ENST00000495363 SYTL4Q96C24 671 aaPredicted RBP16.67■□□□□ 0.26
SMIM11A-207ENST00000495363 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
SMIM11A-207ENST00000495363 R3HDM1Q15032 1099 aaKnown RBP16.66■□□□□ 0.26
SMIM11A-207ENST00000495363 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
SMIM11A-207ENST00000495363 PLSCR1O15162 318 aa16.64■□□□□ 0.25
SMIM11A-207ENST00000495363 PRIM1P49642 420 aaKnown RBP16.63■□□□□ 0.25
SMIM11A-207ENST00000495363 MTHFSP49914 203 aa16.63■□□□□ 0.25
SMIM11A-207ENST00000495363 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
SMIM11A-207ENST00000495363 PCDH11XQ9BZA7 1347 aa16.63■□□□□ 0.25
SMIM11A-207ENST00000495363 PCDH11YQ9BZA8 1340 aa16.63■□□□□ 0.25
SMIM11A-207ENST00000495363 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
SMIM11A-207ENST00000495363 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
SMIM11A-207ENST00000495363 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
SMIM11A-207ENST00000495363 SHANK3Q9BYB0 1731 aa16.6■□□□□ 0.25
SMIM11A-207ENST00000495363 RREB1Q92766 1687 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 CYP27B1O15528 508 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 PROM2Q8N271 834 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
SMIM11A-207ENST00000495363 IL13P35225 146 aa16.58■□□□□ 0.24
SMIM11A-207ENST00000495363 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.24
SMIM11A-207ENST00000495363 AEBP1Q8IUX7 1158 aa16.58■□□□□ 0.24
SMIM11A-207ENST00000495363 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
SMIM11A-207ENST00000495363 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
SMIM11A-207ENST00000495363 BTAF1O14981 1849 aa16.56■□□□□ 0.24
SMIM11A-207ENST00000495363 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
SMIM11A-207ENST00000495363 DIAPH1O60610 1272 aaKnown RBP16.55■□□□□ 0.24
SMIM11A-207ENST00000495363 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
SMIM11A-207ENST00000495363 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
SMIM11A-207ENST00000495363 RGPD3A6NKT7 1758 aaPredicted RBP16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 RGPD4Q7Z3J3 1758 aa16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 HMOX1P09601 288 aa16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMIM11A-207ENST00000495363 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
SMIM11A-207ENST00000495363 PHKG2P15735 406 aa16.53■□□□□ 0.24
SMIM11A-207ENST00000495363 KCNQ4P56696 695 aa16.53■□□□□ 0.24
SMIM11A-207ENST00000495363 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
SMIM11A-207ENST00000495363 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
SMIM11A-207ENST00000495363 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
SMIM11A-207ENST00000495363 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
SMIM11A-207ENST00000495363 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
SMIM11A-207ENST00000495363 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
SMIM11A-207ENST00000495363 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
SMIM11A-207ENST00000495363 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
SMIM11A-207ENST00000495363 SLC15A2Q16348 729 aa16.5■□□□□ 0.23
SMIM11A-207ENST00000495363 CFAP53Q96M91 514 aa16.5■□□□□ 0.23
SMIM11A-207ENST00000495363 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
SMIM11A-207ENST00000495363 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
SMIM11A-207ENST00000495363 SLC27A3Q5K4L6 730 aa16.49■□□□□ 0.23
SMIM11A-207ENST00000495363 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
SMIM11A-207ENST00000495363 PIGBQ92521 554 aa16.48■□□□□ 0.23
SMIM11A-207ENST00000495363 PDGFDQ9GZP0 370 aaPredicted RBP16.48■□□□□ 0.23
SMIM11A-207ENST00000495363 KDRP35968 1356 aa16.48■□□□□ 0.23
SMIM11A-207ENST00000495363 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
SMIM11A-207ENST00000495363 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
SMIM11A-207ENST00000495363 ZNF827Q17R98 1081 aa16.47■□□□□ 0.23
SMIM11A-207ENST00000495363 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
SMIM11A-207ENST00000495363 SRCAPQ6ZRS2 3230 aa16.47■□□□□ 0.23
SMIM11A-207ENST00000495363 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
SMIM11A-207ENST00000495363 COL3A1P02461 1466 aaPredicted RBP16.46■□□□□ 0.23
SMIM11A-207ENST00000495363 ZBTB7AO95365 584 aa16.45■□□□□ 0.22
SMIM11A-207ENST00000495363 SMARCC1Q92922 1105 aaPredicted RBP16.45■□□□□ 0.22
SMIM11A-207ENST00000495363 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
SMIM11A-207ENST00000495363 ITGB4P16144 1822 aa16.45■□□□□ 0.22
SMIM11A-207ENST00000495363 CABP4P57796 275 aa16.44■□□□□ 0.22
SMIM11A-207ENST00000495363 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
SMIM11A-207ENST00000495363 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SMIM11A-207ENST00000495363 ERVV-2B6SEH9 535 aa16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 KDM6AO15550 1401 aaPredicted RBP16.43■□□□□ 0.22
SMIM11A-207ENST00000495363 LY75O60449 1722 aa16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 U2AF1L5P0DN76 240 aaPredicted RBP16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 U2AF1Q01081 240 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
SMIM11A-207ENST00000495363 LRP5O75197 1615 aa16.41■□□□□ 0.22
SMIM11A-207ENST00000495363 ATG3Q9NT62 314 aa16.41■□□□□ 0.22
SMIM11A-207ENST00000495363 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
SMIM11A-207ENST00000495363 MSH5O43196 834 aa16.4■□□□□ 0.22
SMIM11A-207ENST00000495363 PRKAR2BP31323 418 aa16.4■□□□□ 0.22
SMIM11A-207ENST00000495363 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
SMIM11A-207ENST00000495363 LOC102724428A0A0B4J2F2 783 aa16.39■□□□□ 0.21
SMIM11A-207ENST00000495363 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
SMIM11A-207ENST00000495363 SIK1P57059 783 aa16.39■□□□□ 0.21
SMIM11A-207ENST00000495363 NFATC2IPQ8NCF5 419 aa16.39■□□□□ 0.21
SMIM11A-207ENST00000495363 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
SMIM11A-207ENST00000495363 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
SMIM11A-207ENST00000495363 CASZ1Q86V15 1759 aa16.38■□□□□ 0.21
SMIM11A-207ENST00000495363 RALBP1Q15311 655 aa16.37■□□□□ 0.21
SMIM11A-207ENST00000495363 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms