RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SULT6B1Q6IMI4 303 aa16.21■□□□□ 0.19
CSNK1E-213ENST00000495232 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-213ENST00000495232 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
CSNK1E-213ENST00000495232 MARCH10Q8NA82 808 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-213ENST00000495232 SPG7Q9UQ90 795 aa16.2■□□□□ 0.18
CSNK1E-213ENST00000495232 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-213ENST00000495232 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
CSNK1E-213ENST00000495232 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
CSNK1E-213ENST00000495232 ANP32CO43423 234 aa16.18■□□□□ 0.18
CSNK1E-213ENST00000495232 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 RGPD1P0DJD0 1748 aa16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 TRIM37O94972 964 aa16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 HMOX1P09601 288 aa16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 AEBP1Q8IUX7 1158 aa16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSNK1E-213ENST00000495232 KDRP35968 1356 aa16.15■□□□□ 0.18
CSNK1E-213ENST00000495232 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
CSNK1E-213ENST00000495232 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
CSNK1E-213ENST00000495232 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
CSNK1E-213ENST00000495232 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
CSNK1E-213ENST00000495232 BCL9O00512 1426 aa16.14■□□□□ 0.17
CSNK1E-213ENST00000495232 BAG6P46379 1132 aa16.14■□□□□ 0.17
CSNK1E-213ENST00000495232 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
CSNK1E-213ENST00000495232 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
CSNK1E-213ENST00000495232 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
CSNK1E-213ENST00000495232 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
CSNK1E-213ENST00000495232 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
CSNK1E-213ENST00000495232 APBA3O96018 575 aa16.12■□□□□ 0.17
CSNK1E-213ENST00000495232 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
CSNK1E-213ENST00000495232 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-213ENST00000495232 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
CSNK1E-213ENST00000495232 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
CSNK1E-213ENST00000495232 CYP27B1O15528 508 aa16.11■□□□□ 0.17
CSNK1E-213ENST00000495232 NEFMP07197 916 aa16.11■□□□□ 0.17
CSNK1E-213ENST00000495232 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
CSNK1E-213ENST00000495232 FCHSD2O94868 740 aa16.1■□□□□ 0.17
CSNK1E-213ENST00000495232 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-213ENST00000495232 PHKG2P15735 406 aa16.1■□□□□ 0.17
CSNK1E-213ENST00000495232 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
CSNK1E-213ENST00000495232 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.17
CSNK1E-213ENST00000495232 KCNQ2O43526 872 aa16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 PRKAR2BP31323 418 aa16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 PRIM1P49642 420 aaKnown RBP16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
CSNK1E-213ENST00000495232 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-213ENST00000495232 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-213ENST00000495232 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
CSNK1E-213ENST00000495232 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
CSNK1E-213ENST00000495232 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
CSNK1E-213ENST00000495232 DCAF5Q96JK2 942 aa16.06■□□□□ 0.16
CSNK1E-213ENST00000495232 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
CSNK1E-213ENST00000495232 MPRIPQ6WCQ1 1025 aa16.05■□□□□ 0.16
CSNK1E-213ENST00000495232 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
CSNK1E-213ENST00000495232 PLSCR1O15162 318 aa16.04■□□□□ 0.16
CSNK1E-213ENST00000495232 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
CSNK1E-213ENST00000495232 EZH2Q15910 746 aaKnown RBP16.03■□□□□ 0.16
CSNK1E-213ENST00000495232 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
CSNK1E-213ENST00000495232 BTAF1O14981 1849 aa16.03■□□□□ 0.16
CSNK1E-213ENST00000495232 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.16
CSNK1E-213ENST00000495232 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
CSNK1E-213ENST00000495232 GNAT3A8MTJ3 354 aa16.01■□□□□ 0.15
CSNK1E-213ENST00000495232 CABP4P57796 275 aa16.01■□□□□ 0.15
CSNK1E-213ENST00000495232 CAMKK2Q96RR4 588 aa16.01■□□□□ 0.15
CSNK1E-213ENST00000495232 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
CSNK1E-213ENST00000495232 ITGB4P16144 1822 aa16.01■□□□□ 0.15
CSNK1E-213ENST00000495232 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
CSNK1E-213ENST00000495232 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
CSNK1E-213ENST00000495232 MAP3K5Q99683 1374 aa16■□□□□ 0.15
CSNK1E-213ENST00000495232 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
CSNK1E-213ENST00000495232 RGPD3A6NKT7 1758 aaPredicted RBP15.99■□□□□ 0.15
CSNK1E-213ENST00000495232 RGPD4Q7Z3J3 1758 aa15.99■□□□□ 0.15
CSNK1E-213ENST00000495232 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 RNMTO43148 476 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 PIGBQ92521 554 aa15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
CSNK1E-213ENST00000495232 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
CSNK1E-213ENST00000495232 NFATC2IPQ8NCF5 419 aa15.97■□□□□ 0.15
CSNK1E-213ENST00000495232 LGR6Q9HBX8 967 aa15.97■□□□□ 0.15
CSNK1E-213ENST00000495232 TEFQ10587 303 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 NFE2L2Q16236 605 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 RUNDC1Q96C34 613 aa15.96■□□□□ 0.15
CSNK1E-213ENST00000495232 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.14
CSNK1E-213ENST00000495232 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-213ENST00000495232 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-213ENST00000495232 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
CSNK1E-213ENST00000495232 SLC52A2Q9HAB3 445 aa15.95■□□□□ 0.14
CSNK1E-213ENST00000495232 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
CSNK1E-213ENST00000495232 RREB1Q92766 1687 aa15.94■□□□□ 0.14
CSNK1E-213ENST00000495232 PROM2Q8N271 834 aa15.93■□□□□ 0.14
CSNK1E-213ENST00000495232 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms