RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 NBPF4Q96M43 638 aa29.97■■■□□ 2.39
PDE1C-211ENST00000495221 HSP90AB2PQ58FF8 381 aa29.96■■■□□ 2.39
PDE1C-211ENST00000495221 ZCRB1Q8TBF4 217 aaKnown RBP29.96■■■□□ 2.39
PDE1C-211ENST00000495221 LY75O60449 1722 aa29.96■■■□□ 2.39
PDE1C-211ENST00000495221 HSPA5P11021 654 aaKnown RBP29.95■■■□□ 2.39
PDE1C-211ENST00000495221 STK32BQ9NY57 414 aa29.95■■■□□ 2.39
PDE1C-211ENST00000495221 QSER1Q2KHR3 1735 aa29.94■■■□□ 2.38
PDE1C-211ENST00000495221 PKD1L3Q7Z443 1732 aa29.93■■■□□ 2.38
PDE1C-211ENST00000495221 SLC15A2Q16348 729 aa29.93■■■□□ 2.38
PDE1C-211ENST00000495221 RAPGEF4Q8WZA2 1011 aa29.93■■■□□ 2.38
PDE1C-211ENST00000495221 NCAPD2Q15021 1401 aa29.91■■■□□ 2.38
PDE1C-211ENST00000495221 POLR3GLQ9BT43 218 aa29.91■■■□□ 2.38
PDE1C-211ENST00000495221 EMILIN1Q9Y6C2 1016 aa29.91■■■□□ 2.38
PDE1C-211ENST00000495221 USHBP1Q8N6Y0 703 aa29.9■■■□□ 2.38
PDE1C-211ENST00000495221 TATP17735 454 aaPredicted RBP29.89■■■□□ 2.38
PDE1C-211ENST00000495221 WASHC2AQ641Q2 1341 aa29.87■■■□□ 2.37
PDE1C-211ENST00000495221 NSD2O96028 1365 aa29.87■■■□□ 2.37
PDE1C-211ENST00000495221 SLC27A3Q5K4L6 730 aa29.86■■■□□ 2.37
PDE1C-211ENST00000495221 PPP1R1BQ9UD71 204 aaPredicted RBP29.86■■■□□ 2.37
PDE1C-211ENST00000495221 PCDH11XQ9BZA7 1347 aa29.85■■■□□ 2.37
PDE1C-211ENST00000495221 PCDH11YQ9BZA8 1340 aa29.85■■■□□ 2.37
PDE1C-211ENST00000495221 PRIM1P49642 420 aaKnown RBP29.84■■■□□ 2.37
PDE1C-211ENST00000495221 SYTL4Q96C24 671 aaPredicted RBP29.84■■■□□ 2.37
PDE1C-211ENST00000495221 PDGFDQ9GZP0 370 aaPredicted RBP29.84■■■□□ 2.37
PDE1C-211ENST00000495221 ITGB4P16144 1822 aa29.84■■■□□ 2.37
PDE1C-211ENST00000495221 TUBGCP6Q96RT7 1819 aa29.84■■■□□ 2.37
PDE1C-211ENST00000495221 LRRC4BQ9NT99 713 aa29.82■■■□□ 2.36
PDE1C-211ENST00000495221 TOGARAM1Q9Y4F4 1720 aa29.82■■■□□ 2.36
PDE1C-211ENST00000495221 PPM1GO15355 546 aaPredicted RBP29.81■■■□□ 2.36
PDE1C-211ENST00000495221 POLKQ9UBT6 870 aa29.81■■■□□ 2.36
PDE1C-211ENST00000495221 ZBTB7AO95365 584 aa29.8■■■□□ 2.36
PDE1C-211ENST00000495221 PANK3Q9H999 370 aa29.8■■■□□ 2.36
PDE1C-211ENST00000495221 MTFR1LQ9H019 292 aa29.78■■■□□ 2.36
PDE1C-211ENST00000495221 ZNF827Q17R98 1081 aa29.77■■■□□ 2.36
PDE1C-211ENST00000495221 COL24A1Q17RW2 1714 aa29.76■■■□□ 2.36
PDE1C-211ENST00000495221 PTGER2P43116 358 aa29.76■■■□□ 2.35
PDE1C-211ENST00000495221 AKT1S1Q96B36 256 aa29.76■■■□□ 2.35
PDE1C-211ENST00000495221 PLEKHG2Q9H7P9 1386 aa29.76■■■□□ 2.35
PDE1C-211ENST00000495221 TAF1LQ8IZX4 1826 aa29.75■■■□□ 2.35
PDE1C-211ENST00000495221 C5P01031 1676 aa29.75■■■□□ 2.35
PDE1C-211ENST00000495221 EYA1Q99502 592 aa29.74■■■□□ 2.35
PDE1C-211ENST00000495221 CYP27B1O15528 508 aa29.73■■■□□ 2.35
PDE1C-211ENST00000495221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.72■■■□□ 2.35
PDE1C-211ENST00000495221 ATF5Q9Y2D1 282 aaPredicted RBP29.72■■■□□ 2.35
PDE1C-211ENST00000495221 TNNT2P45379 298 aaPredicted RBP29.71■■■□□ 2.35
PDE1C-211ENST00000495221 SPG7Q9UQ90 795 aa29.71■■■□□ 2.35
PDE1C-211ENST00000495221 SGIP1Q9BQI5 828 aa29.7■■■□□ 2.35
PDE1C-211ENST00000495221 EIF4A2Q14240 407 aaKnown RBP29.69■■■□□ 2.34
PDE1C-211ENST00000495221 CCNL1Q9UK58 526 aaPredicted RBP29.69■■■□□ 2.34
PDE1C-211ENST00000495221 NKX1-1Q15270 411 aaPredicted RBP29.68■■■□□ 2.34
PDE1C-211ENST00000495221 SLC16A10Q8TF71 515 aa29.68■■■□□ 2.34
PDE1C-211ENST00000495221 HMGB2P26583 209 aaKnown RBP29.67■■■□□ 2.34
PDE1C-211ENST00000495221 KNSTRNQ9Y448 316 aa29.66■■■□□ 2.34
PDE1C-211ENST00000495221 PNPLA7Q6ZV29 1317 aa29.66■■■□□ 2.34
PDE1C-211ENST00000495221 IGSF1Q8N6C5 1336 aa29.65■■■□□ 2.34
PDE1C-211ENST00000495221 PALLDQ8WX93 1383 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 DCAF8L1A6NGE4 600 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 KCNQ4P56696 695 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 MORC1Q86VD1 984 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 TFCP2L1Q9NZI6 479 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 KIF7Q2M1P5 1343 aa29.64■■■□□ 2.34
PDE1C-211ENST00000495221 MPRIPQ6WCQ1 1025 aa29.63■■■□□ 2.33
PDE1C-211ENST00000495221 SMARCC1Q92922 1105 aaPredicted RBP29.61■■■□□ 2.33
PDE1C-211ENST00000495221 MAP3K5Q99683 1374 aa29.61■■■□□ 2.33
PDE1C-211ENST00000495221 IFNL2Q8IZJ0 200 aa29.6■■■□□ 2.33
PDE1C-211ENST00000495221 C4BP0C0L5 1744 aa29.59■■■□□ 2.33
PDE1C-211ENST00000495221 PHKG2P15735 406 aa29.59■■■□□ 2.33
PDE1C-211ENST00000495221 ARXQ96QS3 562 aa29.59■■■□□ 2.33
PDE1C-211ENST00000495221 FHDC1Q9C0D6 1143 aaPredicted RBP29.59■■■□□ 2.33
PDE1C-211ENST00000495221 UBR3Q6ZT12 1888 aa29.57■■■□□ 2.32
PDE1C-211ENST00000495221 AMER1Q5JTC6 1135 aaPredicted RBP29.57■■■□□ 2.32
PDE1C-211ENST00000495221 SYT17Q9BSW7 474 aa29.57■■■□□ 2.32
PDE1C-211ENST00000495221 PIGBQ92521 554 aa29.56■■■□□ 2.32
PDE1C-211ENST00000495221 POLD1P28340 1107 aa29.53■■■□□ 2.32
PDE1C-211ENST00000495221 TMOD3Q9NYL9 352 aa29.53■■■□□ 2.32
PDE1C-211ENST00000495221 ZNF831Q5JPB2 1677 aa29.53■■■□□ 2.32
PDE1C-211ENST00000495221 CHD4Q14839 1912 aa29.52■■■□□ 2.32
PDE1C-211ENST00000495221 KDRP35968 1356 aa29.51■■■□□ 2.31
PDE1C-211ENST00000495221 HSP90AB1P08238 724 aaKnown RBP29.5■■■□□ 2.31
PDE1C-211ENST00000495221 YY1P25490 414 aa29.5■■■□□ 2.31
PDE1C-211ENST00000495221 AMOTQ4VCS5 1084 aa29.5■■■□□ 2.31
PDE1C-211ENST00000495221 PLEKHO1Q53GL0 409 aaPredicted RBP29.5■■■□□ 2.31
PDE1C-211ENST00000495221 FLAD1Q8NFF5 587 aa29.5■■■□□ 2.31
PDE1C-211ENST00000495221 COL23A1Q86Y22 540 aaPredicted RBP29.49■■■□□ 2.31
PDE1C-211ENST00000495221 PER1O15534 1290 aaPredicted RBP29.48■■■□□ 2.31
PDE1C-211ENST00000495221 SCN11AQ9UI33 1791 aa29.47■■■□□ 2.31
PDE1C-211ENST00000495221 VIRMAQ69YN4 1812 aaKnown RBP29.46■■■□□ 2.31
PDE1C-211ENST00000495221 LOC102724428A0A0B4J2F2 783 aa29.46■■■□□ 2.31
PDE1C-211ENST00000495221 SIK1P57059 783 aa29.46■■■□□ 2.31
PDE1C-211ENST00000495221 DCAF5Q96JK2 942 aa29.46■■■□□ 2.31
PDE1C-211ENST00000495221 NPC1L1Q9UHC9 1359 aa29.45■■■□□ 2.31
PDE1C-211ENST00000495221 ERVV-2B6SEH9 535 aa29.45■■■□□ 2.31
PDE1C-211ENST00000495221 IL13P35225 146 aa29.45■■■□□ 2.31
PDE1C-211ENST00000495221 MSH5O43196 834 aa29.44■■■□□ 2.3
PDE1C-211ENST00000495221 AEBP1Q8IUX7 1158 aa29.44■■■□□ 2.3
PDE1C-211ENST00000495221 AK7Q96M32 723 aa29.44■■■□□ 2.3
PDE1C-211ENST00000495221 KDM6AO15550 1401 aaPredicted RBP29.44■■■□□ 2.3
PDE1C-211ENST00000495221 ZNF530Q6P9A1 599 aaPredicted RBP29.43■■■□□ 2.3
PDE1C-211ENST00000495221 ASAP1Q9ULH1 1129 aa29.43■■■□□ 2.3
PDE1C-211ENST00000495221 COL5A3P25940 1745 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms