RNA–Protein interactions for RNA: ENST00000494928.1

PHF8-218, Transcript of PHD finger protein 8, humanhuman

TSL 2

Gene PHF8, Length 432 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-218ENST00000494928 BRCA1P38398 1863 aaKnown RBP10□□□□□ -0.81
PHF8-218ENST00000494928 ERBB3P21860 1342 aa9.99□□□□□ -0.81
PHF8-218ENST00000494928 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
PHF8-218ENST00000494928 IL2RBP14784 551 aa9.98□□□□□ -0.81
PHF8-218ENST00000494928 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
PHF8-218ENST00000494928 NSD2O96028 1365 aa9.98□□□□□ -0.81
PHF8-218ENST00000494928 ANKRD36BQ8N2N9 1353 aa9.98□□□□□ -0.81
PHF8-218ENST00000494928 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
PHF8-218ENST00000494928 SRPK2P78362 688 aaKnown RBP9.97□□□□□ -0.81
PHF8-218ENST00000494928 COL23A1Q86Y22 540 aaPredicted RBP9.97□□□□□ -0.81
PHF8-218ENST00000494928 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
PHF8-218ENST00000494928 DCAF11Q8TEB1 546 aa9.97□□□□□ -0.81
PHF8-218ENST00000494928 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
PHF8-218ENST00000494928 TTC21AQ8NDW8 1320 aa9.96□□□□□ -0.82
PHF8-218ENST00000494928 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
PHF8-218ENST00000494928 C4BP0C0L5 1744 aa9.96□□□□□ -0.82
PHF8-218ENST00000494928 N4BP2Q86UW6 1770 aaPredicted RBP9.96□□□□□ -0.82
PHF8-218ENST00000494928 KCNQ4P56696 695 aa9.95□□□□□ -0.82
PHF8-218ENST00000494928 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
PHF8-218ENST00000494928 PCDH10Q9P2E7 1040 aa9.95□□□□□ -0.82
PHF8-218ENST00000494928 KDM2AQ9Y2K7 1162 aa9.95□□□□□ -0.82
PHF8-218ENST00000494928 TTC21BQ7Z4L5 1316 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 FSTL1Q12841 308 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 NLRP2Q9NX02 1062 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 CABP1Q9NZU7 370 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 CCNL1Q9UK58 526 aaPredicted RBP9.94□□□□□ -0.82
PHF8-218ENST00000494928 WWC3Q9ULE0 1092 aa9.94□□□□□ -0.82
PHF8-218ENST00000494928 RGPD2P0DJD1 1756 aa9.93□□□□□ -0.82
PHF8-218ENST00000494928 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
PHF8-218ENST00000494928 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
PHF8-218ENST00000494928 SBF1O95248 1867 aa9.93□□□□□ -0.82
PHF8-218ENST00000494928 PLEKHG2Q9H7P9 1386 aa9.92□□□□□ -0.82
PHF8-218ENST00000494928 ITGB4P16144 1822 aa9.92□□□□□ -0.82
PHF8-218ENST00000494928 SOX12O15370 315 aa9.92□□□□□ -0.82
PHF8-218ENST00000494928 HMGB2P26583 209 aaKnown RBP9.92□□□□□ -0.82
PHF8-218ENST00000494928 HTRA3P83110 453 aa9.92□□□□□ -0.82
PHF8-218ENST00000494928 NMRK2Q9NPI5 230 aa9.92□□□□□ -0.82
PHF8-218ENST00000494928 NSD3Q9BZ95 1437 aa9.91□□□□□ -0.82
PHF8-218ENST00000494928 USP31Q70CQ4 1352 aa9.91□□□□□ -0.82
PHF8-218ENST00000494928 USP47Q96K76 1375 aa9.91□□□□□ -0.82
PHF8-218ENST00000494928 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
PHF8-218ENST00000494928 MAP2P11137 1827 aaKnown RBP9.91□□□□□ -0.82
PHF8-218ENST00000494928 PXDNLA1KZ92 1463 aa9.91□□□□□ -0.82
PHF8-218ENST00000494928 ANKRD24Q8TF21 1146 aa9.9□□□□□ -0.82
PHF8-218ENST00000494928 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.82
PHF8-218ENST00000494928 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
PHF8-218ENST00000494928 HSPA1AP0DMV8 641 aaKnown RBP9.89□□□□□ -0.83
PHF8-218ENST00000494928 HSPA1BP0DMV9 641 aaKnown RBP9.89□□□□□ -0.83
PHF8-218ENST00000494928 C16orf71Q8IYS4 520 aaPredicted RBP9.89□□□□□ -0.83
PHF8-218ENST00000494928 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
PHF8-218ENST00000494928 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
PHF8-218ENST00000494928 PDE4DIPQ5VU43 2346 aa9.89□□□□□ -0.83
PHF8-218ENST00000494928 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
PHF8-218ENST00000494928 MEGF6O75095 1541 aa9.87□□□□□ -0.83
PHF8-218ENST00000494928 KCPQ6ZWJ8 1503 aa9.87□□□□□ -0.83
PHF8-218ENST00000494928 HOXD11P31277 338 aaPredicted RBP9.87□□□□□ -0.83
PHF8-218ENST00000494928 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
PHF8-218ENST00000494928 PALLDQ8WX93 1383 aa9.86□□□□□ -0.83
PHF8-218ENST00000494928 KDM2BQ8NHM5 1336 aa9.85□□□□□ -0.83
PHF8-218ENST00000494928 C4AP0C0L4 1744 aa9.85□□□□□ -0.83
PHF8-218ENST00000494928 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
PHF8-218ENST00000494928 SMC1BQ8NDV3 1235 aa9.85□□□□□ -0.83
PHF8-218ENST00000494928 SSFA2P28290 1259 aa9.84□□□□□ -0.83
PHF8-218ENST00000494928 AK7Q96M32 723 aa9.84□□□□□ -0.83
PHF8-218ENST00000494928 TIAM2Q8IVF5 1701 aa9.84□□□□□ -0.83
PHF8-218ENST00000494928 CCDC88AQ3V6T2 1871 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 TGFB2P61812 414 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 AMIGO3Q86WK7 504 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 ZCRB1Q8TBF4 217 aaKnown RBP9.83□□□□□ -0.84
PHF8-218ENST00000494928 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 RAB3GAP2Q9H2M9 1393 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 SBNO2Q9Y2G9 1366 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 CD163L1Q9NR16 1453 aa9.83□□□□□ -0.84
PHF8-218ENST00000494928 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.82□□□□□ -0.84
PHF8-218ENST00000494928 C9orf131Q5VYM1 1079 aa9.82□□□□□ -0.84
PHF8-218ENST00000494928 ZNF831Q5JPB2 1677 aa9.82□□□□□ -0.84
PHF8-218ENST00000494928 CGNL1Q0VF96 1302 aa9.82□□□□□ -0.84
PHF8-218ENST00000494928 ARHGAP27Q6ZUM4 889 aa9.81□□□□□ -0.84
PHF8-218ENST00000494928 IP6K1Q92551 441 aa9.81□□□□□ -0.84
PHF8-218ENST00000494928 RNF216Q9NWF9 866 aaPredicted RBP9.81□□□□□ -0.84
PHF8-218ENST00000494928 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
PHF8-218ENST00000494928 COL5A3P25940 1745 aaPredicted RBP9.81□□□□□ -0.84
PHF8-218ENST00000494928 EDC4Q6P2E9 1401 aaKnown RBP9.81□□□□□ -0.84
PHF8-218ENST00000494928 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
PHF8-218ENST00000494928 PHF14O94880 888 aa9.8□□□□□ -0.84
PHF8-218ENST00000494928 NME9Q86XW9 330 aa9.8□□□□□ -0.84
PHF8-218ENST00000494928 DLEC1Q9Y238 1755 aa9.8□□□□□ -0.84
PHF8-218ENST00000494928 MMP10P09238 476 aa9.79□□□□□ -0.84
PHF8-218ENST00000494928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.79□□□□□ -0.84
PHF8-218ENST00000494928 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
PHF8-218ENST00000494928 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
PHF8-218ENST00000494928 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
PHF8-218ENST00000494928 DICER1Q9UPY3 1922 aaKnown RBP9.79□□□□□ -0.84
PHF8-218ENST00000494928 KDM6AO15550 1401 aaPredicted RBP9.79□□□□□ -0.84
PHF8-218ENST00000494928 RTL1A6NKG5 1358 aa9.78□□□□□ -0.84
PHF8-218ENST00000494928 A0A0G2JLW4 131 aa9.78□□□□□ -0.84
PHF8-218ENST00000494928 FCHSD2O94868 740 aa9.78□□□□□ -0.84
PHF8-218ENST00000494928 PCDH11XQ9BZA7 1347 aa9.78□□□□□ -0.84
PHF8-218ENST00000494928 PCDH11YQ9BZA8 1340 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms