RNA–Protein interactions for RNA: ENST00000494658.1

EIF3B-212, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 637 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-212ENST00000494658 FHDC1Q9C0D6 1143 aaPredicted RBP24.61■■□□□ 1.53
EIF3B-212ENST00000494658 MTFR1LQ9H019 292 aa24.61■■□□□ 1.53
EIF3B-212ENST00000494658 TOGARAM1Q9Y4F4 1720 aa24.61■■□□□ 1.53
EIF3B-212ENST00000494658 RTL1A6NKG5 1358 aa24.6■■□□□ 1.53
EIF3B-212ENST00000494658 ITGB4P16144 1822 aa24.6■■□□□ 1.53
EIF3B-212ENST00000494658 TMF1P82094 1093 aa24.59■■□□□ 1.53
EIF3B-212ENST00000494658 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
EIF3B-212ENST00000494658 NBPF6Q5VWK0 638 aa24.59■■□□□ 1.53
EIF3B-212ENST00000494658 NBPF4Q96M43 638 aa24.59■■□□□ 1.53
EIF3B-212ENST00000494658 MAP2P11137 1827 aaKnown RBP24.58■■□□□ 1.53
EIF3B-212ENST00000494658 TAF1LQ8IZX4 1826 aa24.58■■□□□ 1.53
EIF3B-212ENST00000494658 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.53
EIF3B-212ENST00000494658 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
EIF3B-212ENST00000494658 PRIM1P49642 420 aaKnown RBP24.57■■□□□ 1.52
EIF3B-212ENST00000494658 AKT1S1Q96B36 256 aa24.57■■□□□ 1.52
EIF3B-212ENST00000494658 SYT17Q9BSW7 474 aa24.57■■□□□ 1.52
EIF3B-212ENST00000494658 C5P01031 1676 aa24.56■■□□□ 1.52
EIF3B-212ENST00000494658 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
EIF3B-212ENST00000494658 ZCRB1Q8TBF4 217 aaKnown RBP24.55■■□□□ 1.52
EIF3B-212ENST00000494658 HSP90AB2PQ58FF8 381 aa24.53■■□□□ 1.52
EIF3B-212ENST00000494658 CARD14Q9BXL6 1004 aa24.53■■□□□ 1.52
EIF3B-212ENST00000494658 PNPLA7Q6ZV29 1317 aa24.53■■□□□ 1.52
EIF3B-212ENST00000494658 DCAF8L1A6NGE4 600 aa24.52■■□□□ 1.52
EIF3B-212ENST00000494658 NSD3Q9BZ95 1437 aa24.52■■□□□ 1.52
EIF3B-212ENST00000494658 GOLGB1Q14789 3259 aaKnown RBP24.52■■□□□ 1.51
EIF3B-212ENST00000494658 SLC24A1O60721 1099 aa24.51■■□□□ 1.51
EIF3B-212ENST00000494658 ARXQ96QS3 562 aa24.51■■□□□ 1.51
EIF3B-212ENST00000494658 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
EIF3B-212ENST00000494658 INSRP06213 1382 aa24.5■■□□□ 1.51
EIF3B-212ENST00000494658 SMG6Q86US8 1419 aaKnown RBP24.5■■□□□ 1.51
EIF3B-212ENST00000494658 FLT4P35916 1363 aa24.48■■□□□ 1.51
EIF3B-212ENST00000494658 EMILIN1Q9Y6C2 1016 aa24.48■■□□□ 1.51
EIF3B-212ENST00000494658 MAP3K5Q99683 1374 aa24.45■■□□□ 1.5
EIF3B-212ENST00000494658 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.5
EIF3B-212ENST00000494658 TFCP2L1Q9NZI6 479 aa24.44■■□□□ 1.5
EIF3B-212ENST00000494658 CCNL1Q9UK58 526 aaPredicted RBP24.44■■□□□ 1.5
EIF3B-212ENST00000494658 UBR3Q6ZT12 1888 aa24.43■■□□□ 1.5
EIF3B-212ENST00000494658 TATP17735 454 aaPredicted RBP24.43■■□□□ 1.5
EIF3B-212ENST00000494658 NCAPD2Q15021 1401 aa24.43■■□□□ 1.5
EIF3B-212ENST00000494658 KLHL34Q8N239 644 aa24.42■■□□□ 1.5
EIF3B-212ENST00000494658 C4BP0C0L5 1744 aa24.41■■□□□ 1.5
EIF3B-212ENST00000494658 CGNL1Q0VF96 1302 aa24.41■■□□□ 1.5
EIF3B-212ENST00000494658 CYP27B1O15528 508 aa24.41■■□□□ 1.5
EIF3B-212ENST00000494658 CDCA8Q53HL2 280 aa24.41■■□□□ 1.5
EIF3B-212ENST00000494658 KIF24Q5T7B8 1368 aa24.41■■□□□ 1.5
EIF3B-212ENST00000494658 PCDH11XQ9BZA7 1347 aa24.4■■□□□ 1.5
EIF3B-212ENST00000494658 PCDH11YQ9BZA8 1340 aa24.4■■□□□ 1.5
EIF3B-212ENST00000494658 SLC16A10Q8TF71 515 aa24.4■■□□□ 1.5
EIF3B-212ENST00000494658 COL23A1Q86Y22 540 aaPredicted RBP24.39■■□□□ 1.49
EIF3B-212ENST00000494658 ZNF784Q8NCA9 323 aaPredicted RBP24.39■■□□□ 1.49
EIF3B-212ENST00000494658 NLGN2Q8NFZ4 835 aa24.38■■□□□ 1.49
EIF3B-212ENST00000494658 PPM1GO15355 546 aaPredicted RBP24.37■■□□□ 1.49
EIF3B-212ENST00000494658 PALLDQ8WX93 1383 aa24.37■■□□□ 1.49
EIF3B-212ENST00000494658 MPRIPQ6WCQ1 1025 aa24.36■■□□□ 1.49
EIF3B-212ENST00000494658 POLD1P28340 1107 aa24.35■■□□□ 1.49
EIF3B-212ENST00000494658 MSL1Q68DK7 614 aa24.35■■□□□ 1.49
EIF3B-212ENST00000494658 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
EIF3B-212ENST00000494658 MSH5O43196 834 aa24.34■■□□□ 1.49
EIF3B-212ENST00000494658 AMIGO3Q86WK7 504 aa24.34■■□□□ 1.49
EIF3B-212ENST00000494658 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
EIF3B-212ENST00000494658 POLR3GLQ9BT43 218 aa24.33■■□□□ 1.49
EIF3B-212ENST00000494658 GPR162Q16538 588 aa24.32■■□□□ 1.48
EIF3B-212ENST00000494658 EYA1Q99502 592 aa24.32■■□□□ 1.48
EIF3B-212ENST00000494658 PELP1Q8IZL8 1130 aaKnown RBP24.31■■□□□ 1.48
EIF3B-212ENST00000494658 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
EIF3B-212ENST00000494658 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
EIF3B-212ENST00000494658 PIGBQ92521 554 aa24.29■■□□□ 1.48
EIF3B-212ENST00000494658 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
EIF3B-212ENST00000494658 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
EIF3B-212ENST00000494658 YBX3P16989 372 aaKnown RBP eCLIP24.26■■□□□ 1.47
EIF3B-212ENST00000494658 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
EIF3B-212ENST00000494658 EIF4A2Q14240 407 aaKnown RBP24.25■■□□□ 1.47
EIF3B-212ENST00000494658 HSPA5P11021 654 aaKnown RBP24.24■■□□□ 1.47
EIF3B-212ENST00000494658 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
EIF3B-212ENST00000494658 COL5A3P25940 1745 aaPredicted RBP24.24■■□□□ 1.47
EIF3B-212ENST00000494658 SPG7Q9UQ90 795 aa24.23■■□□□ 1.47
EIF3B-212ENST00000494658 VIRMAQ69YN4 1812 aaKnown RBP24.23■■□□□ 1.47
EIF3B-212ENST00000494658 PHF14O94880 888 aa24.22■■□□□ 1.47
EIF3B-212ENST00000494658 LINC00116Q8NCU8 138 aa24.22■■□□□ 1.47
EIF3B-212ENST00000494658 ASAP1Q9ULH1 1129 aa24.22■■□□□ 1.47
EIF3B-212ENST00000494658 PHKG2P15735 406 aa24.21■■□□□ 1.47
EIF3B-212ENST00000494658 SMARCC1Q92922 1105 aaPredicted RBP24.21■■□□□ 1.47
EIF3B-212ENST00000494658 ITPK1Q13572 414 aa24.2■■□□□ 1.46
EIF3B-212ENST00000494658 AK7Q96M32 723 aa24.2■■□□□ 1.46
EIF3B-212ENST00000494658 LOC102724428A0A0B4J2F2 783 aa24.19■■□□□ 1.46
EIF3B-212ENST00000494658 SIK1P57059 783 aa24.19■■□□□ 1.46
EIF3B-212ENST00000494658 PANK3Q9H999 370 aa24.19■■□□□ 1.46
EIF3B-212ENST00000494658 MYH14Q7Z406 1995 aaKnown RBP24.19■■□□□ 1.46
EIF3B-212ENST00000494658 TMOD3Q9NYL9 352 aa24.18■■□□□ 1.46
EIF3B-212ENST00000494658 KIAA1551Q9HCM1 1747 aa24.18■■□□□ 1.46
EIF3B-212ENST00000494658 ZNF831Q5JPB2 1677 aa24.18■■□□□ 1.46
EIF3B-212ENST00000494658 IGSF1Q8N6C5 1336 aa24.17■■□□□ 1.46
EIF3B-212ENST00000494658 IFNL2Q8IZJ0 200 aa24.17■■□□□ 1.46
EIF3B-212ENST00000494658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.17■■□□□ 1.46
EIF3B-212ENST00000494658 C4AP0C0L4 1744 aa24.17■■□□□ 1.46
EIF3B-212ENST00000494658 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.16■■□□□ 1.46
EIF3B-212ENST00000494658 EIF4G2P78344 907 aaKnown RBP eCLIP24.16■■□□□ 1.46
EIF3B-212ENST00000494658 ATG3Q9NT62 314 aa24.16■■□□□ 1.46
EIF3B-212ENST00000494658 KIF13BQ9NQT8 1826 aa24.16■■□□□ 1.46
EIF3B-212ENST00000494658 N4BP2Q86UW6 1770 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms