RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 ZCRB1Q8TBF4 217 aaKnown RBP19.83■□□□□ 0.77
PMP22-206ENST00000494511 NHSQ6T4R5 1651 aa19.83■□□□□ 0.76
PMP22-206ENST00000494511 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
PMP22-206ENST00000494511 POLKQ9UBT6 870 aa19.82■□□□□ 0.76
PMP22-206ENST00000494511 PROM2Q8N271 834 aa19.81■□□□□ 0.76
PMP22-206ENST00000494511 TATP17735 454 aaPredicted RBP19.8■□□□□ 0.76
PMP22-206ENST00000494511 SHANK3Q9BYB0 1731 aa19.79■□□□□ 0.76
PMP22-206ENST00000494511 WASHC2AQ641Q2 1341 aa19.79■□□□□ 0.76
PMP22-206ENST00000494511 KNSTRNQ9Y448 316 aa19.79■□□□□ 0.76
PMP22-206ENST00000494511 BTAF1O14981 1849 aa19.79■□□□□ 0.76
PMP22-206ENST00000494511 TXNRD1Q16881 649 aa19.78■□□□□ 0.76
PMP22-206ENST00000494511 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
PMP22-206ENST00000494511 CASZ1Q86V15 1759 aa19.78■□□□□ 0.76
PMP22-206ENST00000494511 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
PMP22-206ENST00000494511 ANO8Q9HCE9 1232 aaPredicted RBP19.77■□□□□ 0.76
PMP22-206ENST00000494511 NSD2O96028 1365 aa19.76■□□□□ 0.75
PMP22-206ENST00000494511 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
PMP22-206ENST00000494511 EYA1Q99502 592 aa19.75■□□□□ 0.75
PMP22-206ENST00000494511 DOT1LQ8TEK3 1739 aa19.75■□□□□ 0.75
PMP22-206ENST00000494511 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
PMP22-206ENST00000494511 SPON1Q9HCB6 807 aa19.74■□□□□ 0.75
PMP22-206ENST00000494511 YY1P25490 414 aa19.73■□□□□ 0.75
PMP22-206ENST00000494511 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
PMP22-206ENST00000494511 STK32BQ9NY57 414 aa19.71■□□□□ 0.75
PMP22-206ENST00000494511 PPP1R1BQ9UD71 204 aaPredicted RBP19.71■□□□□ 0.75
PMP22-206ENST00000494511 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
PMP22-206ENST00000494511 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
PMP22-206ENST00000494511 NCAPD2Q15021 1401 aa19.7■□□□□ 0.74
PMP22-206ENST00000494511 CYP27B1O15528 508 aa19.7■□□□□ 0.74
PMP22-206ENST00000494511 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
PMP22-206ENST00000494511 PDGFDQ9GZP0 370 aaPredicted RBP19.69■□□□□ 0.74
PMP22-206ENST00000494511 CC2D1BQ5T0F9 858 aaKnown RBP19.68■□□□□ 0.74
PMP22-206ENST00000494511 LRRC4BQ9NT99 713 aa19.68■□□□□ 0.74
PMP22-206ENST00000494511 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
PMP22-206ENST00000494511 KCNQ4P56696 695 aa19.67■□□□□ 0.74
PMP22-206ENST00000494511 SLC15A2Q16348 729 aa19.67■□□□□ 0.74
PMP22-206ENST00000494511 SPG7Q9UQ90 795 aa19.67■□□□□ 0.74
PMP22-206ENST00000494511 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
PMP22-206ENST00000494511 MPRIPQ6WCQ1 1025 aa19.64■□□□□ 0.73
PMP22-206ENST00000494511 IGSF1Q8N6C5 1336 aa19.64■□□□□ 0.73
PMP22-206ENST00000494511 TOGARAM1Q9Y4F4 1720 aa19.63■□□□□ 0.73
PMP22-206ENST00000494511 PAPPAQ13219 1627 aa19.63■□□□□ 0.73
PMP22-206ENST00000494511 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
PMP22-206ENST00000494511 ZBTB7AO95365 584 aa19.63■□□□□ 0.73
PMP22-206ENST00000494511 ZNF827Q17R98 1081 aa19.63■□□□□ 0.73
PMP22-206ENST00000494511 SLC27A3Q5K4L6 730 aa19.62■□□□□ 0.73
PMP22-206ENST00000494511 ITGB4P16144 1822 aa19.62■□□□□ 0.73
PMP22-206ENST00000494511 MTHFSP49914 203 aa19.61■□□□□ 0.73
PMP22-206ENST00000494511 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
PMP22-206ENST00000494511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.61■□□□□ 0.73
PMP22-206ENST00000494511 LY75O60449 1722 aa19.61■□□□□ 0.73
PMP22-206ENST00000494511 CCNL1Q9UK58 526 aaPredicted RBP19.6■□□□□ 0.73
PMP22-206ENST00000494511 ATF5Q9Y2D1 282 aaPredicted RBP19.6■□□□□ 0.73
PMP22-206ENST00000494511 PHKG2P15735 406 aa19.59■□□□□ 0.73
PMP22-206ENST00000494511 IL13P35225 146 aa19.59■□□□□ 0.73
PMP22-206ENST00000494511 NKX1-1Q15270 411 aaPredicted RBP19.59■□□□□ 0.73
PMP22-206ENST00000494511 IFNL2Q8IZJ0 200 aa19.59■□□□□ 0.73
PMP22-206ENST00000494511 SULT6B1Q6IMI4 303 aa19.58■□□□□ 0.72
PMP22-206ENST00000494511 AKT1S1Q96B36 256 aa19.58■□□□□ 0.72
PMP22-206ENST00000494511 PLEKHO1Q53GL0 409 aaPredicted RBP19.57■□□□□ 0.72
PMP22-206ENST00000494511 PIGBQ92521 554 aa19.57■□□□□ 0.72
PMP22-206ENST00000494511 CHD4Q14839 1912 aa19.57■□□□□ 0.72
PMP22-206ENST00000494511 PTGER2P43116 358 aa19.56■□□□□ 0.72
PMP22-206ENST00000494511 PALLDQ8WX93 1383 aa19.56■□□□□ 0.72
PMP22-206ENST00000494511 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
PMP22-206ENST00000494511 TFCP2L1Q9NZI6 479 aa19.55■□□□□ 0.72
PMP22-206ENST00000494511 UTRNP46939 3433 aa19.55■□□□□ 0.72
PMP22-206ENST00000494511 TUBGCP6Q96RT7 1819 aa19.54■□□□□ 0.72
PMP22-206ENST00000494511 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
PMP22-206ENST00000494511 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
PMP22-206ENST00000494511 SMARCC1Q92922 1105 aaPredicted RBP19.53■□□□□ 0.72
PMP22-206ENST00000494511 MTFR1LQ9H019 292 aa19.53■□□□□ 0.72
PMP22-206ENST00000494511 HMOX1P09601 288 aa19.52■□□□□ 0.72
PMP22-206ENST00000494511 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
PMP22-206ENST00000494511 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
PMP22-206ENST00000494511 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
PMP22-206ENST00000494511 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
PMP22-206ENST00000494511 KDRP35968 1356 aa19.51■□□□□ 0.71
PMP22-206ENST00000494511 PLEKHG2Q9H7P9 1386 aa19.51■□□□□ 0.71
PMP22-206ENST00000494511 C5P01031 1676 aa19.51■□□□□ 0.71
PMP22-206ENST00000494511 C1orf141Q5JVX7 400 aa19.5■□□□□ 0.71
PMP22-206ENST00000494511 TAF1LQ8IZX4 1826 aa19.5■□□□□ 0.71
PMP22-206ENST00000494511 QSER1Q2KHR3 1735 aa19.5■□□□□ 0.71
PMP22-206ENST00000494511 MSH5O43196 834 aa19.49■□□□□ 0.71
PMP22-206ENST00000494511 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
PMP22-206ENST00000494511 DCAF5Q96JK2 942 aa19.49■□□□□ 0.71
PMP22-206ENST00000494511 SGIP1Q9BQI5 828 aa19.49■□□□□ 0.71
PMP22-206ENST00000494511 SYT17Q9BSW7 474 aa19.48■□□□□ 0.71
PMP22-206ENST00000494511 FHDC1Q9C0D6 1143 aaPredicted RBP19.48■□□□□ 0.71
PMP22-206ENST00000494511 KDM6AO15550 1401 aaPredicted RBP19.48■□□□□ 0.71
PMP22-206ENST00000494511 ERVV-2B6SEH9 535 aa19.47■□□□□ 0.71
PMP22-206ENST00000494511 U2SURPO15042 1029 aaKnown RBP19.47■□□□□ 0.71
PMP22-206ENST00000494511 ATG3Q9NT62 314 aa19.47■□□□□ 0.71
PMP22-206ENST00000494511 COL24A1Q17RW2 1714 aa19.46■□□□□ 0.71
PMP22-206ENST00000494511 LOC102724428A0A0B4J2F2 783 aa19.46■□□□□ 0.71
PMP22-206ENST00000494511 SIK1P57059 783 aa19.46■□□□□ 0.71
PMP22-206ENST00000494511 CABP4P57796 275 aa19.46■□□□□ 0.71
PMP22-206ENST00000494511 COL3A1P02461 1466 aaPredicted RBP19.46■□□□□ 0.71
PMP22-206ENST00000494511 COL23A1Q86Y22 540 aaPredicted RBP19.45■□□□□ 0.7
PMP22-206ENST00000494511 ZNF784Q8NCA9 323 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms