RNA–Protein interactions for RNA: ENST00000494372.1

UFM1-205, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 2

Gene UFM1, Length 777 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-205ENST00000494372 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
UFM1-205ENST00000494372 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
UFM1-205ENST00000494372 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
UFM1-205ENST00000494372 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 LMOD1P29536 600 aaPredicted RBP10.54□□□□□ -0.72
UFM1-205ENST00000494372 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 USP4Q13107 963 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 NCOA4Q13772 614 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 OXLD1Q5BKU9 147 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
UFM1-205ENST00000494372 LILRA1O75019 489 aa10.53□□□□□ -0.72
UFM1-205ENST00000494372 SCTRP47872 440 aa10.53□□□□□ -0.72
UFM1-205ENST00000494372 EML3Q32P44 896 aa10.53□□□□□ -0.72
UFM1-205ENST00000494372 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
UFM1-205ENST00000494372 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
UFM1-205ENST00000494372 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
UFM1-205ENST00000494372 ARID3AQ99856 593 aa10.52□□□□□ -0.73
UFM1-205ENST00000494372 RFX1P22670 979 aa10.51□□□□□ -0.73
UFM1-205ENST00000494372 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
UFM1-205ENST00000494372 CBLBQ13191 982 aa10.51□□□□□ -0.73
UFM1-205ENST00000494372 MEIOBQ8N635 442 aa10.51□□□□□ -0.73
UFM1-205ENST00000494372 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
UFM1-205ENST00000494372 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
UFM1-205ENST00000494372 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
UFM1-205ENST00000494372 LCE2AQ5TA79 106 aaPredicted RBP10.5□□□□□ -0.73
UFM1-205ENST00000494372 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
UFM1-205ENST00000494372 SCARF1Q14162 830 aa10.49□□□□□ -0.73
UFM1-205ENST00000494372 Q6ZVU0 165 aa10.49□□□□□ -0.73
UFM1-205ENST00000494372 NOD1Q9Y239 953 aa10.49□□□□□ -0.73
UFM1-205ENST00000494372 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
UFM1-205ENST00000494372 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
UFM1-205ENST00000494372 OSBPL3Q9H4L5 887 aa10.48□□□□□ -0.73
UFM1-205ENST00000494372 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
UFM1-205ENST00000494372 NFX1Q12986 1120 aaKnown RBP10.47□□□□□ -0.73
UFM1-205ENST00000494372 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
UFM1-205ENST00000494372 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
UFM1-205ENST00000494372 ATP5J2-PTCD1G3V325 749 aa10.46□□□□□ -0.73
UFM1-205ENST00000494372 BMP2P12643 396 aa10.46□□□□□ -0.73
UFM1-205ENST00000494372 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.73
UFM1-205ENST00000494372 LCE2CQ5TA81 110 aa10.46□□□□□ -0.73
UFM1-205ENST00000494372 ADH1AP07327 375 aa10.45□□□□□ -0.74
UFM1-205ENST00000494372 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
UFM1-205ENST00000494372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
UFM1-205ENST00000494372 GTF2IP78347 998 aa10.44□□□□□ -0.74
UFM1-205ENST00000494372 CYP2U1Q7Z449 544 aa10.44□□□□□ -0.74
UFM1-205ENST00000494372 PBXIP1Q96AQ6 731 aa10.44□□□□□ -0.74
UFM1-205ENST00000494372 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
UFM1-205ENST00000494372 PCDHGA11Q9Y5H2 935 aa10.44□□□□□ -0.74
UFM1-205ENST00000494372 TERTO14746 1132 aaKnown RBP10.43□□□□□ -0.74
UFM1-205ENST00000494372 ATP1A2P50993 1020 aa10.43□□□□□ -0.74
UFM1-205ENST00000494372 KDF1Q8NAX2 398 aaPredicted RBP10.43□□□□□ -0.74
UFM1-205ENST00000494372 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
UFM1-205ENST00000494372 SOS2Q07890 1332 aaPredicted RBP10.42□□□□□ -0.74
UFM1-205ENST00000494372 WFS1O76024 890 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 UPP2O95045 317 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 RASA1P20936 1047 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 CLDN10P78369 228 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 OGFOD1Q8N543 542 aa10.42□□□□□ -0.74
UFM1-205ENST00000494372 ZBTB7BO15156 539 aaPredicted RBP10.41□□□□□ -0.74
UFM1-205ENST00000494372 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
UFM1-205ENST00000494372 GNRH1P01148 92 aa10.41□□□□□ -0.74
UFM1-205ENST00000494372 VEGFBP49765 207 aa10.41□□□□□ -0.74
UFM1-205ENST00000494372 DNAAF2Q9NVR5 837 aaKnown RBP10.41□□□□□ -0.74
UFM1-205ENST00000494372 PTGIRP43119 386 aa10.4□□□□□ -0.74
UFM1-205ENST00000494372 RELBQ01201 579 aa10.4□□□□□ -0.74
UFM1-205ENST00000494372 LARP1Q6PKG0 1096 aaKnown RBP10.4□□□□□ -0.74
UFM1-205ENST00000494372 LARGE2Q8N3Y3 721 aa10.4□□□□□ -0.74
UFM1-205ENST00000494372 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
UFM1-205ENST00000494372 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.74
UFM1-205ENST00000494372 FAM196BA6NMK8 535 aa10.39□□□□□ -0.75
UFM1-205ENST00000494372 PSME1Q06323 249 aa10.39□□□□□ -0.75
UFM1-205ENST00000494372 PTK7Q13308 1070 aa10.39□□□□□ -0.75
UFM1-205ENST00000494372 CRTC2Q53ET0 693 aaPredicted RBP10.39□□□□□ -0.75
UFM1-205ENST00000494372 KIAA1024Q9UPX6 916 aa10.39□□□□□ -0.75
UFM1-205ENST00000494372 SPINT1O43278 529 aa10.38□□□□□ -0.75
UFM1-205ENST00000494372 MAN1A2O60476 641 aa10.38□□□□□ -0.75
UFM1-205ENST00000494372 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
UFM1-205ENST00000494372 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
UFM1-205ENST00000494372 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L15C9J2P7 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L13C9JLJ4 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L11C9JVI0 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L21D6R901 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L18D6R9N7 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L22D6RA61 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L17D6RBQ6 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L19D6RCP7 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L20D6RJB6 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 SCNN1DP51172 638 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 USP17L24Q0WX57 530 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 SIX5Q8N196 739 aa10.37□□□□□ -0.75
UFM1-205ENST00000494372 ZNF594Q96JF6 807 aaPredicted RBP10.37□□□□□ -0.75
UFM1-205ENST00000494372 FIGNL2A6NMB9 653 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms