RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 NSD2O96028 1365 aa9.84□□□□□ -0.83
RBM39-239ENST00000494274 PARP4Q9UKK3 1724 aaKnown RBP9.84□□□□□ -0.83
RBM39-239ENST00000494274 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 LRRC37A3O60309 1634 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 MTHFSP49914 203 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 SLC15A2Q16348 729 aa9.83□□□□□ -0.84
RBM39-239ENST00000494274 PDGFDQ9GZP0 370 aaPredicted RBP9.82□□□□□ -0.84
RBM39-239ENST00000494274 SPON1Q9HCB6 807 aa9.82□□□□□ -0.84
RBM39-239ENST00000494274 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
RBM39-239ENST00000494274 RGPD5Q99666 1765 aa9.82□□□□□ -0.84
RBM39-239ENST00000494274 ZBTB7AO95365 584 aa9.81□□□□□ -0.84
RBM39-239ENST00000494274 PLEKHO1Q53GL0 409 aaPredicted RBP9.81□□□□□ -0.84
RBM39-239ENST00000494274 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
RBM39-239ENST00000494274 IFNL2Q8IZJ0 200 aa9.81□□□□□ -0.84
RBM39-239ENST00000494274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.81□□□□□ -0.842e-28■■□□□ 12.9
RBM39-239ENST00000494274 PPP1R1BQ9UD71 204 aaPredicted RBP9.81□□□□□ -0.84
RBM39-239ENST00000494274 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
RBM39-239ENST00000494274 RGPD1P0DJD0 1748 aa9.81□□□□□ -0.84
RBM39-239ENST00000494274 LTN1O94822 1766 aa9.8□□□□□ -0.84
RBM39-239ENST00000494274 SLC27A3Q5K4L6 730 aa9.8□□□□□ -0.84
RBM39-239ENST00000494274 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
RBM39-239ENST00000494274 CCNL1Q9UK58 526 aaPredicted RBP9.8□□□□□ -0.84
RBM39-239ENST00000494274 MYOM1P52179 1685 aa9.8□□□□□ -0.84
RBM39-239ENST00000494274 IGSF1Q8N6C5 1336 aa9.8□□□□□ -0.84
RBM39-239ENST00000494274 PEAK1Q9H792 1746 aa9.79□□□□□ -0.84
RBM39-239ENST00000494274 PHKG2P15735 406 aa9.79□□□□□ -0.84
RBM39-239ENST00000494274 IL13P35225 146 aa9.79□□□□□ -0.84
RBM39-239ENST00000494274 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
RBM39-239ENST00000494274 PIGBQ92521 554 aa9.79□□□□□ -0.84
RBM39-239ENST00000494274 TFCP2L1Q9NZI6 479 aa9.79□□□□□ -0.84
RBM39-239ENST00000494274 MSH5O43196 834 aa9.78□□□□□ -0.84
RBM39-239ENST00000494274 DIAPH1O60610 1272 aaKnown RBP9.78□□□□□ -0.84
RBM39-239ENST00000494274 HMOX1P09601 288 aa9.78□□□□□ -0.84
RBM39-239ENST00000494274 ZNF827Q17R98 1081 aa9.78□□□□□ -0.84
RBM39-239ENST00000494274 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
RBM39-239ENST00000494274 ZNF530Q6P9A1 599 aaPredicted RBP9.78□□□□□ -0.84
RBM39-239ENST00000494274 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
RBM39-239ENST00000494274 TNS1Q9HBL0 1735 aaKnown RBP9.78□□□□□ -0.84
RBM39-239ENST00000494274 SRCAPQ6ZRS2 3230 aa9.77□□□□□ -0.84
RBM39-239ENST00000494274 U2SURPO15042 1029 aaKnown RBP9.77□□□□□ -0.85
RBM39-239ENST00000494274 C1orf141Q5JVX7 400 aa9.77□□□□□ -0.85
RBM39-239ENST00000494274 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
RBM39-239ENST00000494274 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
RBM39-239ENST00000494274 HSP90AB1P08238 724 aaKnown RBP9.76□□□□□ -0.85
RBM39-239ENST00000494274 CABP4P57796 275 aa9.76□□□□□ -0.85
RBM39-239ENST00000494274 DCAF5Q96JK2 942 aa9.76□□□□□ -0.85
RBM39-239ENST00000494274 ASAP1Q9ULH1 1129 aa9.76□□□□□ -0.85
RBM39-239ENST00000494274 PALLDQ8WX93 1383 aa9.75□□□□□ -0.85
RBM39-239ENST00000494274 MTFR1LQ9H019 292 aa9.75□□□□□ -0.85
RBM39-239ENST00000494274 KIF20BQ96Q89 1820 aa9.75□□□□□ -0.85
RBM39-239ENST00000494274 NCAPD2Q15021 1401 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 FAM208AQ9UK61 1670 aaKnown RBP9.74□□□□□ -0.85
RBM39-239ENST00000494274 ERVV-2B6SEH9 535 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 PTGER2P43116 358 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 NFATC2IPQ8NCF5 419 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 CFAP53Q96M91 514 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
RBM39-239ENST00000494274 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
RBM39-239ENST00000494274 LOC102724428A0A0B4J2F2 783 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 HMGB2P26583 209 aaKnown RBP9.73□□□□□ -0.85
RBM39-239ENST00000494274 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 SIK1P57059 783 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 AK7Q96M32 723 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 ATG3Q9NT62 314 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 PNPLA7Q6ZV29 1317 aa9.73□□□□□ -0.85
RBM39-239ENST00000494274 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
RBM39-239ENST00000494274 DDX10Q13206 875 aaKnown RBP9.72□□□□□ -0.85
RBM39-239ENST00000494274 MTHFSDQ2M296 383 aaKnown RBP9.72□□□□□ -0.85
RBM39-239ENST00000494274 AKAP4Q5JQC9 854 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 SMIM5Q71RC9 77 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
RBM39-239ENST00000494274 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 SLC16A10Q8TF71 515 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 LGR6Q9HBX8 967 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 NUDCQ9Y266 331 aa9.72□□□□□ -0.85
RBM39-239ENST00000494274 WNK3Q9BYP7 1800 aa9.71□□□□□ -0.85
RBM39-239ENST00000494274 DCAF8L1A6NGE4 600 aa9.71□□□□□ -0.86
RBM39-239ENST00000494274 PHF14O94880 888 aa9.71□□□□□ -0.86
RBM39-239ENST00000494274 POLD1P28340 1107 aa9.71□□□□□ -0.86
RBM39-239ENST00000494274 ARXQ96QS3 562 aa9.71□□□□□ -0.86
RBM39-239ENST00000494274 RGPD2P0DJD1 1756 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 U2AF1L5P0DN76 240 aaPredicted RBP9.7□□□□□ -0.86
RBM39-239ENST00000494274 U2AF1Q01081 240 aaKnown RBP eCLIP9.7□□□□□ -0.86
RBM39-239ENST00000494274 ITPK1Q13572 414 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 MSL1Q68DK7 614 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 LINC00116Q8NCU8 138 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 FLAD1Q8NFF5 587 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 FHDC1Q9C0D6 1143 aaPredicted RBP9.7□□□□□ -0.86
RBM39-239ENST00000494274 KDRP35968 1356 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 NHSQ6T4R5 1651 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
RBM39-239ENST00000494274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.69□□□□□ -0.86
RBM39-239ENST00000494274 GNPATO15228 680 aa9.69□□□□□ -0.86
RBM39-239ENST00000494274 RNMTO43148 476 aaKnown RBP9.69□□□□□ -0.86
RBM39-239ENST00000494274 SBF2Q86WG5 1849 aa9.69□□□□□ -0.86
RBM39-239ENST00000494274 RREB1Q92766 1687 aa9.69□□□□□ -0.86
RBM39-239ENST00000494274 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 852.5 ms