RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RHOQP17081 205 aa4.5□□□□□ -1.69
CDC42EP3-205ENST00000494083 PRICKLE2Q7Z3G6 844 aa4.5□□□□□ -1.69
CDC42EP3-205ENST00000494083 OSBPL3Q9H4L5 887 aa4.5□□□□□ -1.69
CDC42EP3-205ENST00000494083 PIK3CDO00329 1044 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 ERVK-9P63128 1117 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 WIPF1O43516 503 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 GPR161Q8N6U8 529 aaKnown RBP4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 COG6Q9Y2V7 657 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 KRT76Q01546 638 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 SEPT12Q8IYM1 358 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 CEP126Q9P2H0 1117 aa4.49□□□□□ -1.69
CDC42EP3-205ENST00000494083 MEN1O00255 615 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 SOCS7O14512 581 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 IRF7Q92985 503 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 CUEDC1Q9NWM3 386 aaPredicted RBP4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 PTGIRP43119 386 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 A0A1W2PRU2 124 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 ATP5J2-PTCD1G3V325 749 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 RNFT1Q5M7Z0 435 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 CCDC155Q8N6L0 562 aa4.48□□□□□ -1.69
CDC42EP3-205ENST00000494083 POM121CA8CG34 1229 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 TRAK2O60296 914 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 CC2D2BQ6DHV5 1058 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 SLC16A10Q8TF71 515 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 CDC14CA4D256 554 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 ADAMTS19Q8TE59 1207 aa4.47□□□□□ -1.69
CDC42EP3-205ENST00000494083 BIVM-ERCC5R4GMW8 1640 aa4.46□□□□□ -1.69
CDC42EP3-205ENST00000494083 VSIG8P0DPA2 414 aa4.46□□□□□ -1.7
CDC42EP3-205ENST00000494083 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.7
CDC42EP3-205ENST00000494083 CLUAP1Q96AJ1 413 aa4.46□□□□□ -1.7
CDC42EP3-205ENST00000494083 SLC35F4A4IF30 521 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 IL2RAP01589 272 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 ITGA6P23229 1130 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 NPAS3Q8IXF0 933 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 PHTF2Q8N3S3 785 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 GPR25O00155 361 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 APBB1O00213 710 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 RNF135Q8IUD6 432 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 CNKSR1Q969H4 720 aa4.45□□□□□ -1.7
CDC42EP3-205ENST00000494083 WRNQ14191 1432 aaPredicted RBP eCLIP4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 POU4F2Q12837 409 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 CLN3Q13286 438 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 DEPDC4Q8N2C3 294 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 POLR1AO95602 1720 aaPredicted RBP4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 KIF21BO75037 1637 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 LYSMD3Q7Z3D4 306 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 DOLKQ9UPQ8 538 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 VWA5B2Q8N398 1253 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 ETNK1Q9HBU6 452 aa4.44□□□□□ -1.7
CDC42EP3-205ENST00000494083 EIF4G2P78344 907 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 SLFNL1Q499Z3 407 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 CNTNAP3BQ96NU0 1288 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 COL25A1Q9BXS0 654 aaPredicted RBP4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 CNTNAP3Q9BZ76 1288 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 ZNF330Q9Y3S2 320 aaPredicted RBP4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 PHKA2P46019 1235 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 RNF20Q5VTR2 975 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 THBS1P07996 1170 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 SLC27A3Q5K4L6 730 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 CYP2U1Q7Z449 544 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 GPAMQ9HCL2 828 aa4.43□□□□□ -1.7
CDC42EP3-205ENST00000494083 SCNN1DP51172 638 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 PLPP7Q8NBV4 271 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 UCN2Q96RP3 112 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 RNF144AP50876 292 aaPredicted RBP4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 ZSCAN1Q8NBB4 408 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 USP3Q9Y6I4 520 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 UBTFP17480 764 aaKnown RBP4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 GAS6Q14393 721 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 RIPOR1Q6ZS17 1223 aa4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 GAS2L1Q99501 681 aaPredicted RBP4.42□□□□□ -1.7
CDC42EP3-205ENST00000494083 INSM1Q01101 510 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 ZNF837Q96EG3 531 aaPredicted RBP4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 CHIC2Q9UKJ5 165 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 NCOA4Q13772 614 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 ESYT1Q9BSJ8 1104 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 SEMA3FQ13275 785 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 DBN1Q16643 649 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 NBPF10Q6P3W6 841 aaKnown RBP4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 NBPF15Q8N660 670 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 WHAMMQ8TF30 809 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 NLRP3Q96P20 1036 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 ALG2Q9H553 416 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 HRH3Q9Y5N1 445 aa4.41□□□□□ -1.7
CDC42EP3-205ENST00000494083 CENPCQ03188 943 aa4.4□□□□□ -1.7
CDC42EP3-205ENST00000494083 FHDC1Q9C0D6 1143 aaPredicted RBP4.4□□□□□ -1.7
CDC42EP3-205ENST00000494083 GRIP2Q9C0E4 1043 aa4.4□□□□□ -1.7
CDC42EP3-205ENST00000494083 TOP2AP11388 1531 aaKnown RBP4.4□□□□□ -1.7
CDC42EP3-205ENST00000494083 SMARCA2P51531 1590 aa4.4□□□□□ -1.71
CDC42EP3-205ENST00000494083 MYCP01106 439 aaPredicted RBP4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 PRM3Q9NNZ6 103 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 KIAA1024Q9UPX6 916 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 TMEM229AB2RXF0 380 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 GNRH1P01148 92 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 WASHC4Q2M389 1173 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 NANOS1Q8WY41 292 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 GTPBP3Q969Y2 492 aaKnown RBP4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 CUX2O14529 1486 aa4.39□□□□□ -1.71
CDC42EP3-205ENST00000494083 WASLO00401 505 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms