RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 USP4Q13107 963 aa11.11□□□□□ -0.63
SSB-212ENST00000494051 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
SSB-212ENST00000494051 NFATC2IPQ8NCF5 419 aa11.11□□□□□ -0.63
SSB-212ENST00000494051 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
SSB-212ENST00000494051 POTECB2RU33 542 aa11.1□□□□□ -0.63
SSB-212ENST00000494051 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
SSB-212ENST00000494051 DEPDC4Q8N2C3 294 aa11.09□□□□□ -0.63
SSB-212ENST00000494051 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
SSB-212ENST00000494051 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
SSB-212ENST00000494051 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
SSB-212ENST00000494051 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
SSB-212ENST00000494051 ATP5J2-PTCD1G3V325 749 aa11.08□□□□□ -0.64
SSB-212ENST00000494051 OSBPL3Q9H4L5 887 aa11.08□□□□□ -0.64
SSB-212ENST00000494051 ARID3CA6NKF2 412 aa11.07□□□□□ -0.64
SSB-212ENST00000494051 PTGIRP43119 386 aa11.07□□□□□ -0.64
SSB-212ENST00000494051 CYP2U1Q7Z449 544 aa11.07□□□□□ -0.64
SSB-212ENST00000494051 SIRT1Q96EB6 747 aa11.07□□□□□ -0.64
SSB-212ENST00000494051 TFIP11Q9UBB9 837 aaKnown RBP11.07□□□□□ -0.64
SSB-212ENST00000494051 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
SSB-212ENST00000494051 ATP9BO43861 1147 aa11.06□□□□□ -0.64
SSB-212ENST00000494051 NCOA4Q13772 614 aa11.06□□□□□ -0.64
SSB-212ENST00000494051 EML3Q32P44 896 aa11.06□□□□□ -0.64
SSB-212ENST00000494051 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
SSB-212ENST00000494051 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
SSB-212ENST00000494051 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
SSB-212ENST00000494051 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
SSB-212ENST00000494051 TRIM47Q96LD4 638 aa11.05□□□□□ -0.64
SSB-212ENST00000494051 INSM2Q96T92 566 aaPredicted RBP11.05□□□□□ -0.64
SSB-212ENST00000494051 USP17L3A6NCW0 530 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 USP17L4A6NCW7 530 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 SPINT1O43278 529 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 SNRPBP14678 240 aaKnown RBP11.04□□□□□ -0.64
SSB-212ENST00000494051 USP17L2Q6R6M4 530 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 TREML4Q6UXN2 200 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 USP17L1Q7RTZ2 530 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 PPP1R12CQ9BZL4 782 aa11.04□□□□□ -0.64
SSB-212ENST00000494051 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
SSB-212ENST00000494051 POLMQ9NP87 494 aaPredicted RBP11.03□□□□□ -0.64
SSB-212ENST00000494051 NOD1Q9Y239 953 aa11.03□□□□□ -0.64
SSB-212ENST00000494051 A0A1W2PRU2 124 aa11.02□□□□□ -0.65
SSB-212ENST00000494051 MEN1O00255 615 aa11.02□□□□□ -0.65
SSB-212ENST00000494051 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.65
SSB-212ENST00000494051 RAB6BQ9NRW1 208 aa11.02□□□□□ -0.65
SSB-212ENST00000494051 TTLL8A6PVC2 850 aa11.01□□□□□ -0.65
SSB-212ENST00000494051 GNRH1P01148 92 aa11.01□□□□□ -0.65
SSB-212ENST00000494051 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
SSB-212ENST00000494051 PLEKHM2Q8IWE5 1019 aa11.01□□□□□ -0.65
SSB-212ENST00000494051 MAFBQ9Y5Q3 323 aaPredicted RBP11.01□□□□□ -0.65
SSB-212ENST00000494051 MAN1A2O60476 641 aa11□□□□□ -0.65
SSB-212ENST00000494051 LMOD1P29536 600 aaPredicted RBP11□□□□□ -0.65
SSB-212ENST00000494051 NLRP3Q96P20 1036 aa11□□□□□ -0.65
SSB-212ENST00000494051 STK17AQ9UEE5 414 aa11□□□□□ -0.65
SSB-212ENST00000494051 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
SSB-212ENST00000494051 FIGNL2A6NMB9 653 aa10.99□□□□□ -0.65
SSB-212ENST00000494051 SOBPA7XYQ1 873 aa10.99□□□□□ -0.65
SSB-212ENST00000494051 STAU1O95793 577 aaKnown RBP10.99□□□□□ -0.65
SSB-212ENST00000494051 GTF2IP78347 998 aa10.98□□□□□ -0.65
SSB-212ENST00000494051 PSME1Q06323 249 aa10.98□□□□□ -0.65
SSB-212ENST00000494051 CCDC97Q96F63 343 aaPredicted RBP10.98□□□□□ -0.65
SSB-212ENST00000494051 MKRN1Q9UHC7 482 aaKnown RBP10.98□□□□□ -0.65
SSB-212ENST00000494051 CLN3Q13286 438 aa10.97□□□□□ -0.65
SSB-212ENST00000494051 TRIM50Q86XT4 487 aa10.97□□□□□ -0.65
SSB-212ENST00000494051 DNMT3LQ9UJW3 386 aa10.97□□□□□ -0.65
SSB-212ENST00000494051 PCDHGA11Q9Y5H2 935 aa10.97□□□□□ -0.65
SSB-212ENST00000494051 RFX1P22670 979 aa10.96□□□□□ -0.65
SSB-212ENST00000494051 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
SSB-212ENST00000494051 CFAP70Q5T0N1 1121 aa10.96□□□□□ -0.65
SSB-212ENST00000494051 CNKSR1Q969H4 720 aa10.96□□□□□ -0.65
SSB-212ENST00000494051 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
SSB-212ENST00000494051 IL2RAP01589 272 aa10.95□□□□□ -0.66
SSB-212ENST00000494051 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
SSB-212ENST00000494051 GDF10P55107 478 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 SLC27A3Q5K4L6 730 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
SSB-212ENST00000494051 RNF217Q8TC41 542 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 C1orf115Q9H7X2 142 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
SSB-212ENST00000494051 RNF144AP50876 292 aaPredicted RBP10.93□□□□□ -0.66
SSB-212ENST00000494051 ATP1A2P50993 1020 aa10.93□□□□□ -0.66
SSB-212ENST00000494051 SCNN1DP51172 638 aa10.93□□□□□ -0.66
SSB-212ENST00000494051 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.93□□□□□ -0.66
SSB-212ENST00000494051 OGFOD1Q8N543 542 aa10.93□□□□□ -0.66
SSB-212ENST00000494051 XAGE2Q96GT9 111 aa10.93□□□□□ -0.66
SSB-212ENST00000494051 INHAP05111 366 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 RASA1P20936 1047 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 CLDN10P78369 228 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 DNAAF2Q9NVR5 837 aaKnown RBP10.92□□□□□ -0.66
SSB-212ENST00000494051 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
SSB-212ENST00000494051 GPC1P35052 558 aa10.91□□□□□ -0.66
SSB-212ENST00000494051 CENPCQ03188 943 aa10.91□□□□□ -0.66
SSB-212ENST00000494051 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
SSB-212ENST00000494051 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
SSB-212ENST00000494051 LYSMD3Q7Z3D4 306 aa10.91□□□□□ -0.66
SSB-212ENST00000494051 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
SSB-212ENST00000494051 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
SSB-212ENST00000494051 ZBTB7BO15156 539 aaPredicted RBP10.9□□□□□ -0.66
SSB-212ENST00000494051 LARP1Q6PKG0 1096 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms