RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 LY75O60449 1722 aa14.22□□□□□ -0.13
NR1H3-225ENST00000494018 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.13
NR1H3-225ENST00000494018 DOT1LQ8TEK3 1739 aa14.19□□□□□ -0.14
NR1H3-225ENST00000494018 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
NR1H3-225ENST00000494018 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
NR1H3-225ENST00000494018 AMIGO3Q86WK7 504 aa14.17□□□□□ -0.14
NR1H3-225ENST00000494018 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
NR1H3-225ENST00000494018 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
NR1H3-225ENST00000494018 ERBB3P21860 1342 aa14.16□□□□□ -0.14
NR1H3-225ENST00000494018 PHF14O94880 888 aa14.16□□□□□ -0.14
NR1H3-225ENST00000494018 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
NR1H3-225ENST00000494018 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
NR1H3-225ENST00000494018 NSD2O96028 1365 aa14.16□□□□□ -0.14
NR1H3-225ENST00000494018 FSTL1Q12841 308 aa14.15□□□□□ -0.14
NR1H3-225ENST00000494018 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
NR1H3-225ENST00000494018 NFAT5O94916 1531 aa14.15□□□□□ -0.14
NR1H3-225ENST00000494018 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.15
NR1H3-225ENST00000494018 C5P01031 1676 aa14.14□□□□□ -0.15
NR1H3-225ENST00000494018 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
NR1H3-225ENST00000494018 KCPQ6ZWJ8 1503 aa14.14□□□□□ -0.15
NR1H3-225ENST00000494018 QRICH2Q9H0J4 1663 aa14.14□□□□□ -0.15
NR1H3-225ENST00000494018 CICQ96RK0 1608 aaPredicted RBP14.13□□□□□ -0.15
NR1H3-225ENST00000494018 A0A0G2JLW4 131 aa14.13□□□□□ -0.15
NR1H3-225ENST00000494018 C9orf131Q5VYM1 1079 aa14.13□□□□□ -0.15
NR1H3-225ENST00000494018 LTV1Q96GA3 475 aaPredicted RBP14.13□□□□□ -0.15
NR1H3-225ENST00000494018 ANKRD36BQ8N2N9 1353 aa14.12□□□□□ -0.15
NR1H3-225ENST00000494018 LTN1O94822 1766 aa14.12□□□□□ -0.15
NR1H3-225ENST00000494018 USP54Q70EL1 1684 aa14.11□□□□□ -0.15
NR1H3-225ENST00000494018 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
NR1H3-225ENST00000494018 USP47Q96K76 1375 aa14.1□□□□□ -0.15
NR1H3-225ENST00000494018 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
NR1H3-225ENST00000494018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
NR1H3-225ENST00000494018 PXDNLA1KZ92 1463 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 TOGARAM1Q9Y4F4 1720 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 FCHSD2O94868 740 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 SMC1BQ8NDV3 1235 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 AK7Q96M32 723 aa14.08□□□□□ -0.16
NR1H3-225ENST00000494018 PKD1L3Q7Z443 1732 aa14.07□□□□□ -0.16
NR1H3-225ENST00000494018 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
NR1H3-225ENST00000494018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
NR1H3-225ENST00000494018 FOXN1O15353 648 aa14.07□□□□□ -0.16
NR1H3-225ENST00000494018 CENPJQ9HC77 1338 aaPredicted RBP14.07□□□□□ -0.16
NR1H3-225ENST00000494018 RNF181Q9P0P0 153 aa14.06□□□□□ -0.16
NR1H3-225ENST00000494018 MKRN1Q9UHC7 482 aaKnown RBP14.06□□□□□ -0.16
NR1H3-225ENST00000494018 KDM2BQ8NHM5 1336 aa14.06□□□□□ -0.16
NR1H3-225ENST00000494018 C4BP0C0L5 1744 aa14.06□□□□□ -0.16
NR1H3-225ENST00000494018 RGPD2P0DJD1 1756 aa14.06□□□□□ -0.16
NR1H3-225ENST00000494018 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
NR1H3-225ENST00000494018 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
NR1H3-225ENST00000494018 DPEP1P16444 411 aa14.05□□□□□ -0.16
NR1H3-225ENST00000494018 MMP10P09238 476 aa14.04□□□□□ -0.16
NR1H3-225ENST00000494018 NME9Q86XW9 330 aa14.04□□□□□ -0.16
NR1H3-225ENST00000494018 ZCRB1Q8TBF4 217 aaKnown RBP14.04□□□□□ -0.16
NR1H3-225ENST00000494018 TTC21AQ8NDW8 1320 aa14.03□□□□□ -0.16
NR1H3-225ENST00000494018 PALLDQ8WX93 1383 aa14.03□□□□□ -0.16
NR1H3-225ENST00000494018 TNRC6CQ9HCJ0 1690 aaKnown RBP14.02□□□□□ -0.16
NR1H3-225ENST00000494018 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
NR1H3-225ENST00000494018 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
NR1H3-225ENST00000494018 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
NR1H3-225ENST00000494018 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
NR1H3-225ENST00000494018 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
NR1H3-225ENST00000494018 SBF1O95248 1867 aa14□□□□□ -0.17
NR1H3-225ENST00000494018 BRCA1P38398 1863 aaKnown RBP14□□□□□ -0.17
NR1H3-225ENST00000494018 MEGF6O75095 1541 aa14□□□□□ -0.17
NR1H3-225ENST00000494018 TGFB2P61812 414 aa13.99□□□□□ -0.17
NR1H3-225ENST00000494018 USHBP1Q8N6Y0 703 aa13.99□□□□□ -0.17
NR1H3-225ENST00000494018 ABHD8Q96I13 439 aa13.99□□□□□ -0.17
NR1H3-225ENST00000494018 FBLN1P23142 703 aa13.98□□□□□ -0.17
NR1H3-225ENST00000494018 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
NR1H3-225ENST00000494018 ARFGEF1Q9Y6D6 1849 aa13.97□□□□□ -0.17
NR1H3-225ENST00000494018 CCDC85CA6NKD9 419 aa13.97□□□□□ -0.17
NR1H3-225ENST00000494018 GNPATO15228 680 aa13.97□□□□□ -0.17
NR1H3-225ENST00000494018 LBX1P52954 281 aa13.97□□□□□ -0.17
NR1H3-225ENST00000494018 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
NR1H3-225ENST00000494018 FAM208AQ9UK61 1670 aaKnown RBP13.97□□□□□ -0.17
NR1H3-225ENST00000494018 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
NR1H3-225ENST00000494018 KCNA3P22001 575 aa13.96□□□□□ -0.17
NR1H3-225ENST00000494018 RASSF7Q02833 373 aa13.96□□□□□ -0.17
NR1H3-225ENST00000494018 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
NR1H3-225ENST00000494018 ITGB4P16144 1822 aa13.96□□□□□ -0.17
NR1H3-225ENST00000494018 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.18
NR1H3-225ENST00000494018 SSFA2P28290 1259 aa13.95□□□□□ -0.18
NR1H3-225ENST00000494018 IP6K1Q92551 441 aa13.95□□□□□ -0.18
NR1H3-225ENST00000494018 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
NR1H3-225ENST00000494018 MON2Q7Z3U7 1717 aa13.95□□□□□ -0.18
NR1H3-225ENST00000494018 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
NR1H3-225ENST00000494018 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
NR1H3-225ENST00000494018 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
NR1H3-225ENST00000494018 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
NR1H3-225ENST00000494018 AIDAQ96BJ3 306 aa13.93□□□□□ -0.18
NR1H3-225ENST00000494018 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
NR1H3-225ENST00000494018 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
NR1H3-225ENST00000494018 CHRNA5P30532 468 aa13.92□□□□□ -0.18
NR1H3-225ENST00000494018 ITPK1Q13572 414 aa13.92□□□□□ -0.18
NR1H3-225ENST00000494018 DALRD3Q5D0E6 543 aaKnown RBP13.92□□□□□ -0.18
NR1H3-225ENST00000494018 DCAF5Q96JK2 942 aa13.92□□□□□ -0.18
NR1H3-225ENST00000494018 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
NR1H3-225ENST00000494018 TMF1P82094 1093 aa13.91□□□□□ -0.18
NR1H3-225ENST00000494018 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms