RNA–Protein interactions for RNA: ENST00000493896.2

ECHDC2-218, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-218ENST00000493896 R3HDM1Q15032 1099 aaKnown RBP18.37■□□□□ 0.53
ECHDC2-218ENST00000493896 MARCH10Q8NA82 808 aaPredicted RBP18.37■□□□□ 0.53
ECHDC2-218ENST00000493896 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
ECHDC2-218ENST00000493896 RGPD1P0DJD0 1748 aa18.36■□□□□ 0.53
ECHDC2-218ENST00000493896 RALBP1Q15311 655 aa18.36■□□□□ 0.53
ECHDC2-218ENST00000493896 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
ECHDC2-218ENST00000493896 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
ECHDC2-218ENST00000493896 COL3A1P02461 1466 aaPredicted RBP18.35■□□□□ 0.53
ECHDC2-218ENST00000493896 SHANK3Q9BYB0 1731 aa18.35■□□□□ 0.53
ECHDC2-218ENST00000493896 DDX54Q8TDD1 881 aaKnown RBP18.34■□□□□ 0.53
ECHDC2-218ENST00000493896 SBF2Q86WG5 1849 aa18.33■□□□□ 0.52
ECHDC2-218ENST00000493896 BCL9O00512 1426 aa18.32■□□□□ 0.52
ECHDC2-218ENST00000493896 PKD1L3Q7Z443 1732 aa18.32■□□□□ 0.52
ECHDC2-218ENST00000493896 TRIM37O94972 964 aa18.32■□□□□ 0.52
ECHDC2-218ENST00000493896 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
ECHDC2-218ENST00000493896 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
ECHDC2-218ENST00000493896 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
ECHDC2-218ENST00000493896 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
ECHDC2-218ENST00000493896 SULT6B1Q6IMI4 303 aa18.31■□□□□ 0.52
ECHDC2-218ENST00000493896 TNS1Q9HBL0 1735 aaKnown RBP18.3■□□□□ 0.52
ECHDC2-218ENST00000493896 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
ECHDC2-218ENST00000493896 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
ECHDC2-218ENST00000493896 KDRP35968 1356 aa18.3■□□□□ 0.52
ECHDC2-218ENST00000493896 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
ECHDC2-218ENST00000493896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.52
ECHDC2-218ENST00000493896 NUDCQ9Y266 331 aa18.29■□□□□ 0.52
ECHDC2-218ENST00000493896 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
ECHDC2-218ENST00000493896 HMOX1P09601 288 aa18.27■□□□□ 0.52
ECHDC2-218ENST00000493896 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
ECHDC2-218ENST00000493896 NHSQ6T4R5 1651 aa18.27■□□□□ 0.52
ECHDC2-218ENST00000493896 APBA3O96018 575 aa18.26■□□□□ 0.51
ECHDC2-218ENST00000493896 AMOTQ4VCS5 1084 aa18.26■□□□□ 0.51
ECHDC2-218ENST00000493896 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
ECHDC2-218ENST00000493896 ACSBG1Q96GR2 724 aa18.26■□□□□ 0.51
ECHDC2-218ENST00000493896 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
ECHDC2-218ENST00000493896 CYP27B1O15528 508 aa18.25■□□□□ 0.51
ECHDC2-218ENST00000493896 DOT1LQ8TEK3 1739 aa18.25■□□□□ 0.51
ECHDC2-218ENST00000493896 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
ECHDC2-218ENST00000493896 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
ECHDC2-218ENST00000493896 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
ECHDC2-218ENST00000493896 KCNQ2O43526 872 aa18.22■□□□□ 0.51
ECHDC2-218ENST00000493896 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
ECHDC2-218ENST00000493896 PHKG2P15735 406 aa18.22■□□□□ 0.51
ECHDC2-218ENST00000493896 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
ECHDC2-218ENST00000493896 CAMKK2Q96RR4 588 aa18.22■□□□□ 0.51
ECHDC2-218ENST00000493896 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-218ENST00000493896 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
ECHDC2-218ENST00000493896 SYTL4Q96C24 671 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-218ENST00000493896 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
ECHDC2-218ENST00000493896 ANP32CO43423 234 aa18.2■□□□□ 0.5
ECHDC2-218ENST00000493896 YY1P25490 414 aa18.2■□□□□ 0.5
ECHDC2-218ENST00000493896 NKX1-1Q15270 411 aaPredicted RBP18.2■□□□□ 0.5
ECHDC2-218ENST00000493896 PPP1R1BQ9UD71 204 aaPredicted RBP18.2■□□□□ 0.5
ECHDC2-218ENST00000493896 BTAF1O14981 1849 aa18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 HSP90AB1P08238 724 aaKnown RBP18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 PRIM1P49642 420 aaKnown RBP18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 RGPD3A6NKT7 1758 aaPredicted RBP18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 RGPD4Q7Z3J3 1758 aa18.19■□□□□ 0.5
ECHDC2-218ENST00000493896 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
ECHDC2-218ENST00000493896 FCHSD2O94868 740 aa18.18■□□□□ 0.5
ECHDC2-218ENST00000493896 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
ECHDC2-218ENST00000493896 PLSCR1O15162 318 aa18.17■□□□□ 0.5
ECHDC2-218ENST00000493896 ITGB4P16144 1822 aa18.16■□□□□ 0.5
ECHDC2-218ENST00000493896 MTHFSDQ2M296 383 aaKnown RBP18.16■□□□□ 0.5
ECHDC2-218ENST00000493896 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
ECHDC2-218ENST00000493896 GAS2L2Q8NHY3 880 aa18.15■□□□□ 0.5
ECHDC2-218ENST00000493896 DCAF5Q96JK2 942 aa18.15■□□□□ 0.5
ECHDC2-218ENST00000493896 RREB1Q92766 1687 aa18.15■□□□□ 0.5
ECHDC2-218ENST00000493896 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
ECHDC2-218ENST00000493896 NEFMP07197 916 aa18.13■□□□□ 0.49
ECHDC2-218ENST00000493896 SPON1Q9HCB6 807 aa18.13■□□□□ 0.49
ECHDC2-218ENST00000493896 KDM6AO15550 1401 aaPredicted RBP18.13■□□□□ 0.49
ECHDC2-218ENST00000493896 SCN11AQ9UI33 1791 aa18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
ECHDC2-218ENST00000493896 NUP188Q5SRE5 1749 aa18.11■□□□□ 0.49
ECHDC2-218ENST00000493896 VIRMAQ69YN4 1812 aaKnown RBP18.11■□□□□ 0.49
ECHDC2-218ENST00000493896 PIGBQ92521 554 aa18.1■□□□□ 0.49
ECHDC2-218ENST00000493896 MAP3K5Q99683 1374 aa18.09■□□□□ 0.49
ECHDC2-218ENST00000493896 GNAT3A8MTJ3 354 aa18.09■□□□□ 0.49
ECHDC2-218ENST00000493896 CABP4P57796 275 aa18.09■□□□□ 0.49
ECHDC2-218ENST00000493896 TXNRD1Q16881 649 aa18.09■□□□□ 0.49
ECHDC2-218ENST00000493896 LY75O60449 1722 aa18.09■□□□□ 0.49
ECHDC2-218ENST00000493896 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.49
ECHDC2-218ENST00000493896 RNMTO43148 476 aaKnown RBP18.08■□□□□ 0.48
ECHDC2-218ENST00000493896 PROM2Q8N271 834 aa18.08■□□□□ 0.48
ECHDC2-218ENST00000493896 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
ECHDC2-218ENST00000493896 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
ECHDC2-218ENST00000493896 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
ECHDC2-218ENST00000493896 LGR6Q9HBX8 967 aa18.07■□□□□ 0.48
ECHDC2-218ENST00000493896 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
ECHDC2-218ENST00000493896 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
ECHDC2-218ENST00000493896 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
ECHDC2-218ENST00000493896 NFATC2IPQ8NCF5 419 aa18.05■□□□□ 0.48
ECHDC2-218ENST00000493896 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms