RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 HCLS1P14317 486 aaPredicted RBP10.14□□□□□ -0.79
GBP3-208ENST00000493594 DCTN1Q14203 1278 aa10.14□□□□□ -0.79
GBP3-208ENST00000493594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
GBP3-208ENST00000493594 MROH2AA6NES4 1674 aa10.14□□□□□ -0.79
GBP3-208ENST00000493594 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
GBP3-208ENST00000493594 PALD1Q9ULE6 856 aa10.14□□□□□ -0.79
GBP3-208ENST00000493594 COL3A1P02461 1466 aaPredicted RBP10.14□□□□□ -0.79
GBP3-208ENST00000493594 NRXN1Q9ULB1 1477 aa10.14□□□□□ -0.79
GBP3-208ENST00000493594 PPRC1Q5VV67 1664 aaKnown RBP10.13□□□□□ -0.79
GBP3-208ENST00000493594 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
GBP3-208ENST00000493594 USP32Q8NFA0 1604 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 KRT24Q2M2I5 525 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 GGT6Q6P531 493 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
GBP3-208ENST00000493594 ZFYVE16Q7Z3T8 1539 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.79
GBP3-208ENST00000493594 CEP85Q6P2H3 762 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 PDCL2Q8N4E4 241 aa10.13□□□□□ -0.79
GBP3-208ENST00000493594 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
GBP3-208ENST00000493594 PHF14O94880 888 aa10.12□□□□□ -0.79
GBP3-208ENST00000493594 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
GBP3-208ENST00000493594 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
GBP3-208ENST00000493594 TERF2IPQ9NYB0 399 aa10.12□□□□□ -0.79
GBP3-208ENST00000493594 FKBP5Q13451 457 aaPredicted RBP10.12□□□□□ -0.79
GBP3-208ENST00000493594 GTPBP4Q9BZE4 634 aaKnown RBP10.12□□□□□ -0.79
GBP3-208ENST00000493594 ADGRB1O14514 1584 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 DTNBO60941 627 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
GBP3-208ENST00000493594 SPC24Q8NBT2 197 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 MEIS3Q99687 375 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 ANO2Q9NQ90 1003 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 SETBP1Q9Y6X0 1596 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 DEPDC5O75140 1603 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
GBP3-208ENST00000493594 FAM184AQ8NB25 1140 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
GBP3-208ENST00000493594 POLKQ9UBT6 870 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 CNPY2Q9Y2B0 182 aa10.11□□□□□ -0.79
GBP3-208ENST00000493594 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 CUL4AQ13619 759 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 UVSSAQ2YD98 709 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
GBP3-208ENST00000493594 RILPL2Q969X0 211 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 LARP6Q9BRS8 491 aaKnown RBP10.1□□□□□ -0.79
GBP3-208ENST00000493594 BCL11BQ9C0K0 894 aaPredicted RBP10.1□□□□□ -0.79
GBP3-208ENST00000493594 CABP1Q9NZU7 370 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 PDE1AP54750 535 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
GBP3-208ENST00000493594 KNDC1Q76NI1 1749 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 VWDEQ8N2E2 1590 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 INO80Q9ULG1 1556 aaPredicted RBP10.09□□□□□ -0.79
GBP3-208ENST00000493594 LRRC7Q96NW7 1537 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 PNPLA6Q8IY17 1366 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 KDM4AO75164 1064 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 KIF20AO95235 890 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 MCM2P49736 904 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 FGD1P98174 961 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 SPTLC3Q9NUV7 552 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 AP5Z1O43299 807 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 CHAF1AQ13111 956 aaPredicted RBP10.09□□□□□ -0.79
GBP3-208ENST00000493594 CCDC183Q5T5S1 534 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
GBP3-208ENST00000493594 EXOC6BQ9Y2D4 811 aa10.09□□□□□ -0.79
GBP3-208ENST00000493594 LETM1O95202 739 aaPredicted RBP10.08□□□□□ -0.8
GBP3-208ENST00000493594 MX1P20591 662 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 KIAA1524Q8TCG1 905 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 ESYT1Q9BSJ8 1104 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 KCNF1Q9H3M0 494 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 ATP7AQ04656 1500 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 ATP10DQ9P241 1426 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 WDR33Q9C0J8 1336 aaKnown RBP10.08□□□□□ -0.8
GBP3-208ENST00000493594 VGFO15240 615 aaPredicted RBP10.08□□□□□ -0.8
GBP3-208ENST00000493594 FIBPO43427 364 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 MCCP23508 829 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 INTS4Q96HW7 963 aaKnown RBP10.08□□□□□ -0.8
GBP3-208ENST00000493594 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
GBP3-208ENST00000493594 TCHHQ07283 1943 aa10.07□□□□□ -0.8
GBP3-208ENST00000493594 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.07□□□□□ -0.8
GBP3-208ENST00000493594 BBXQ8WY36 941 aaPredicted RBP10.07□□□□□ -0.8
GBP3-208ENST00000493594 RTL1A6NKG5 1358 aa10.07□□□□□ -0.8
GBP3-208ENST00000493594 MSH6P52701 1360 aa10.07□□□□□ -0.8
GBP3-208ENST00000493594 DIAPH3Q9NSV4 1193 aa10.07□□□□□ -0.8
GBP3-208ENST00000493594 EFCAB6Q5THR3 1501 aa10.06□□□□□ -0.8
GBP3-208ENST00000493594 ZNF771Q7L3S4 317 aaPredicted RBP10.06□□□□□ -0.8
GBP3-208ENST00000493594 ADGRB3O60242 1522 aa10.06□□□□□ -0.8
GBP3-208ENST00000493594 MROH1Q8NDA8 1641 aa10.06□□□□□ -0.8
GBP3-208ENST00000493594 GLI2P10070 1586 aa10.06□□□□□ -0.8
GBP3-208ENST00000493594 CDK19Q9BWU1 502 aa10.06□□□□□ -0.8
GBP3-208ENST00000493594 F6X3S4 739 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms