RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
CAB39-206ENST00000493540 CHD4Q14839 1912 aa10.36□□□□□ -0.75
CAB39-206ENST00000493540 NFAT5O94916 1531 aa10.36□□□□□ -0.75
CAB39-206ENST00000493540 BRD4O60885 1362 aaPredicted RBP10.36□□□□□ -0.75
CAB39-206ENST00000493540 KIAA0232Q92628 1395 aa10.36□□□□□ -0.75
CAB39-206ENST00000493540 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
CAB39-206ENST00000493540 SPATA31A1Q5TZJ5 1347 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 BTG4Q9NY30 223 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
CAB39-206ENST00000493540 UTRNP46939 3433 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 SHANK3Q9BYB0 1731 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
CAB39-206ENST00000493540 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
CAB39-206ENST00000493540 SAFB2Q14151 953 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAB39-206ENST00000493540 TRAK1Q9UPV9 953 aa10.34□□□□□ -0.75
CAB39-206ENST00000493540 BCL9O00512 1426 aa10.33□□□□□ -0.76
CAB39-206ENST00000493540 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
CAB39-206ENST00000493540 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
CAB39-206ENST00000493540 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
CAB39-206ENST00000493540 POGKQ9P215 609 aa10.33□□□□□ -0.76
CAB39-206ENST00000493540 USP6P35125 1406 aa10.33□□□□□ -0.76
CAB39-206ENST00000493540 G3V3G9 751 aa10.32□□□□□ -0.76
CAB39-206ENST00000493540 FAM98CQ17RN3 349 aaKnown RBP10.32□□□□□ -0.76
CAB39-206ENST00000493540 LCE2DQ5TA82 110 aaPredicted RBP10.32□□□□□ -0.76
CAB39-206ENST00000493540 SCUBE2Q9NQ36 999 aa10.32□□□□□ -0.76
CAB39-206ENST00000493540 BTAF1O14981 1849 aa10.32□□□□□ -0.76
CAB39-206ENST00000493540 MYOM1P52179 1685 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 POTEFA5A3E0 1075 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 DCAF11Q8TEB1 546 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 BOLA1Q9Y3E2 137 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 PPIP5K1Q6PFW1 1433 aa10.31□□□□□ -0.76
CAB39-206ENST00000493540 BAG6P46379 1132 aa10.3□□□□□ -0.76
CAB39-206ENST00000493540 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
CAB39-206ENST00000493540 NUDT16Q96DE0 195 aaKnown RBP10.3□□□□□ -0.76
CAB39-206ENST00000493540 CAMKK2Q96RR4 588 aa10.3□□□□□ -0.76
CAB39-206ENST00000493540 PRDM11Q9NQV5 511 aa10.29□□□□□ -0.76
CAB39-206ENST00000493540 CRB1P82279 1406 aa10.29□□□□□ -0.76
CAB39-206ENST00000493540 CPSF1Q10570 1443 aaKnown RBP10.29□□□□□ -0.76
CAB39-206ENST00000493540 LY75O60449 1722 aa10.29□□□□□ -0.76
CAB39-206ENST00000493540 ACEP12821 1306 aa10.29□□□□□ -0.76
CAB39-206ENST00000493540 RGPD2P0DJD1 1756 aa10.29□□□□□ -0.76
CAB39-206ENST00000493540 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
CAB39-206ENST00000493540 PDE4AP27815 886 aa10.28□□□□□ -0.76
CAB39-206ENST00000493540 TMEM121BQ9BXQ6 578 aaPredicted RBP10.28□□□□□ -0.76
CAB39-206ENST00000493540 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
CAB39-206ENST00000493540 GOLGB1Q14789 3259 aaKnown RBP10.28□□□□□ -0.76
CAB39-206ENST00000493540 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
CAB39-206ENST00000493540 OVOS2A0A0G2JMS6 1433 aa10.27□□□□□ -0.77
CAB39-206ENST00000493540 OVOS2A0A0J9YW53 1432 aa10.27□□□□□ -0.77
CAB39-206ENST00000493540 OVOS2Q6IE36 1432 aa10.27□□□□□ -0.77
CAB39-206ENST00000493540 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
CAB39-206ENST00000493540 CD163L1Q9NR16 1453 aa10.27□□□□□ -0.77
CAB39-206ENST00000493540 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
CAB39-206ENST00000493540 NBPF8Q3BBV2 869 aa10.26□□□□□ -0.77
CAB39-206ENST00000493540 FAM182BQ5T319 152 aa10.26□□□□□ -0.77
CAB39-206ENST00000493540 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
CAB39-206ENST00000493540 NGDNQ8NEJ9 315 aaKnown RBP10.26□□□□□ -0.77
CAB39-206ENST00000493540 CDK19Q9BWU1 502 aa10.26□□□□□ -0.77
CAB39-206ENST00000493540 CCDC9Q9Y3X0 531 aaKnown RBP10.26□□□□□ -0.77
CAB39-206ENST00000493540 ANKRD26Q9UPS8 1709 aa10.25□□□□□ -0.77
CAB39-206ENST00000493540 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
CAB39-206ENST00000493540 THRAP3Q9Y2W1 955 aaKnown RBP10.25□□□□□ -0.77
CAB39-206ENST00000493540 KAT6BQ8WYB5 2073 aa10.25□□□□□ -0.77
CAB39-206ENST00000493540 TAF1LQ8IZX4 1826 aa10.25□□□□□ -0.77
CAB39-206ENST00000493540 TNS2Q63HR2 1409 aa10.24□□□□□ -0.77
CAB39-206ENST00000493540 DOT1LQ8TEK3 1739 aa10.24□□□□□ -0.77
CAB39-206ENST00000493540 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
CAB39-206ENST00000493540 CHRNA2Q15822 529 aa10.24□□□□□ -0.77
CAB39-206ENST00000493540 NBPF1Q3BBV0 1214 aa10.24□□□□□ -0.77
CAB39-206ENST00000493540 CENPJQ9HC77 1338 aaPredicted RBP10.24□□□□□ -0.77
CAB39-206ENST00000493540 EZH2Q15910 746 aaKnown RBP10.23□□□□□ -0.77
CAB39-206ENST00000493540 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
CAB39-206ENST00000493540 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
CAB39-206ENST00000493540 KIF20BQ96Q89 1820 aa10.23□□□□□ -0.77
CAB39-206ENST00000493540 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
CAB39-206ENST00000493540 TCP11L2Q8N4U5 519 aa10.22□□□□□ -0.77
CAB39-206ENST00000493540 GCP02774 474 aa10.21□□□□□ -0.77
CAB39-206ENST00000493540 ZC3H6P61129 1189 aaKnown RBP10.21□□□□□ -0.77
CAB39-206ENST00000493540 R3HDM1Q15032 1099 aaKnown RBP10.21□□□□□ -0.77
CAB39-206ENST00000493540 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
CAB39-206ENST00000493540 NINLQ9Y2I6 1382 aa10.21□□□□□ -0.78
CAB39-206ENST00000493540 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
CAB39-206ENST00000493540 TRIM37O94972 964 aa10.2□□□□□ -0.78
CAB39-206ENST00000493540 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
CAB39-206ENST00000493540 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
CAB39-206ENST00000493540 WDR17Q8IZU2 1322 aa10.2□□□□□ -0.78
CAB39-206ENST00000493540 ITGB4P16144 1822 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 A0A0G2JS52 829 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 MYT1Q01538 1121 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 PKD1L3Q7Z443 1732 aa10.19□□□□□ -0.78
CAB39-206ENST00000493540 PLSCR1O15162 318 aa10.18□□□□□ -0.78
CAB39-206ENST00000493540 MFSD10Q14728 455 aa10.18□□□□□ -0.78
CAB39-206ENST00000493540 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
CAB39-206ENST00000493540 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
CAB39-206ENST00000493540 TTC21AQ8NDW8 1320 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms