RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 SLC17A8Q8NDX2 589 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
KPNA1-209ENST00000493510 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 C10orf71Q711Q0 1435 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
KPNA1-209ENST00000493510 MYO5BQ9ULV0 1848 aa10.47□□□□□ -0.73
KPNA1-209ENST00000493510 TIE1P35590 1138 aa10.47□□□□□ -0.73
KPNA1-209ENST00000493510 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
KPNA1-209ENST00000493510 DDX27Q96GQ7 796 aaKnown RBP10.47□□□□□ -0.73
KPNA1-209ENST00000493510 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
KPNA1-209ENST00000493510 HFM1A2PYH4 1435 aa10.47□□□□□ -0.73
KPNA1-209ENST00000493510 NUTM2FA1L443 756 aa10.46□□□□□ -0.73
KPNA1-209ENST00000493510 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
KPNA1-209ENST00000493510 HSPA8P11142 646 aaKnown RBP10.46□□□□□ -0.73
KPNA1-209ENST00000493510 WBP1LQ9NX94 342 aa10.46□□□□□ -0.73
KPNA1-209ENST00000493510 ABCA3Q99758 1704 aa10.46□□□□□ -0.74
KPNA1-209ENST00000493510 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
KPNA1-209ENST00000493510 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
KPNA1-209ENST00000493510 THRAP3Q9Y2W1 955 aaKnown RBP10.45□□□□□ -0.74
KPNA1-209ENST00000493510 TOPAZ1Q8N9V7 1692 aa10.44□□□□□ -0.74
KPNA1-209ENST00000493510 NRXN3Q9Y4C0 1643 aa10.44□□□□□ -0.74
KPNA1-209ENST00000493510 PXDNLA1KZ92 1463 aa10.44□□□□□ -0.74
KPNA1-209ENST00000493510 EVA1CP58658 441 aa10.44□□□□□ -0.74
KPNA1-209ENST00000493510 ZNF827Q17R98 1081 aa10.44□□□□□ -0.74
KPNA1-209ENST00000493510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.746e-7■■■■□ 21.1
KPNA1-209ENST00000493510 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
KPNA1-209ENST00000493510 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
KPNA1-209ENST00000493510 RRAGCQ9HB90 399 aa10.42□□□□□ -0.74
KPNA1-209ENST00000493510 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
KPNA1-209ENST00000493510 PLEKHG2Q9H7P9 1386 aa10.41□□□□□ -0.74
KPNA1-209ENST00000493510 TRIM26Q12899 539 aaPredicted RBP10.41□□□□□ -0.74
KPNA1-209ENST00000493510 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
KPNA1-209ENST00000493510 ATP7BP35670 1465 aa10.41□□□□□ -0.74
KPNA1-209ENST00000493510 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
KPNA1-209ENST00000493510 KIF1AQ12756 1690 aa10.41□□□□□ -0.74
KPNA1-209ENST00000493510 IGSF1Q8N6C5 1336 aa10.4□□□□□ -0.74
KPNA1-209ENST00000493510 SMYD5Q6GMV2 418 aa10.4□□□□□ -0.74
KPNA1-209ENST00000493510 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
KPNA1-209ENST00000493510 CNTNAP1P78357 1384 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 PNPLA7Q6ZV29 1317 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 PEAK1Q9H792 1746 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 UBTFP17480 764 aaKnown RBP10.39□□□□□ -0.75
KPNA1-209ENST00000493510 CAMK2BQ13554 666 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 BCL9O00512 1426 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
KPNA1-209ENST00000493510 DDB1Q16531 1140 aa10.38□□□□□ -0.75
KPNA1-209ENST00000493510 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
KPNA1-209ENST00000493510 CEP162Q5TB80 1403 aa10.38□□□□□ -0.75
KPNA1-209ENST00000493510 CICQ96RK0 1608 aaPredicted RBP10.37□□□□□ -0.75
KPNA1-209ENST00000493510 GALR2O43603 387 aaPredicted RBP10.37□□□□□ -0.75
KPNA1-209ENST00000493510 FXR1P51114 621 aaKnown RBP eCLIP10.37□□□□□ -0.75
KPNA1-209ENST00000493510 MAP2K1Q02750 393 aaPredicted RBP10.37□□□□□ -0.75
KPNA1-209ENST00000493510 NAIPQ13075 1403 aa10.37□□□□□ -0.75
KPNA1-209ENST00000493510 CHRNA2Q15822 529 aa10.37□□□□□ -0.75
KPNA1-209ENST00000493510 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
KPNA1-209ENST00000493510 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
KPNA1-209ENST00000493510 MCOLN1Q9GZU1 580 aa10.37□□□□□ -0.75
KPNA1-209ENST00000493510 RRP7BPQ9NSQ0 103 aa10.37□□□□□ -0.75
KPNA1-209ENST00000493510 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
KPNA1-209ENST00000493510 NBPF15Q8N660 670 aa10.36□□□□□ -0.75
KPNA1-209ENST00000493510 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
KPNA1-209ENST00000493510 EEA1Q15075 1411 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 KCPQ6ZWJ8 1503 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 GTF3C3Q9Y5Q9 886 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 PHRF1Q9P1Y6 1649 aaKnown RBP10.35□□□□□ -0.75
KPNA1-209ENST00000493510 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
KPNA1-209ENST00000493510 PARP4Q9UKK3 1724 aaKnown RBP10.34□□□□□ -0.75
KPNA1-209ENST00000493510 VEGFBP49765 207 aa10.34□□□□□ -0.75
KPNA1-209ENST00000493510 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
KPNA1-209ENST00000493510 SBF2Q86WG5 1849 aa10.34□□□□□ -0.75
KPNA1-209ENST00000493510 HAX1O00165 279 aa10.33□□□□□ -0.76
KPNA1-209ENST00000493510 C9orf131Q5VYM1 1079 aa10.33□□□□□ -0.76
KPNA1-209ENST00000493510 SOX10P56693 466 aa10.32□□□□□ -0.76
KPNA1-209ENST00000493510 ZNF326Q5BKZ1 582 aaKnown RBP10.32□□□□□ -0.76
KPNA1-209ENST00000493510 ARHGAP27Q6ZUM4 889 aa10.32□□□□□ -0.76
KPNA1-209ENST00000493510 MARCH10Q8NA82 808 aaPredicted RBP10.32□□□□□ -0.76
KPNA1-209ENST00000493510 VEGFAP15692 232 aaPredicted RBP10.31□□□□□ -0.76
KPNA1-209ENST00000493510 CLCN6P51797 869 aa10.31□□□□□ -0.76
KPNA1-209ENST00000493510 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
KPNA1-209ENST00000493510 SLC24A3Q9HC58 644 aa10.31□□□□□ -0.76
KPNA1-209ENST00000493510 LRRC4BQ9NT99 713 aa10.31□□□□□ -0.76
KPNA1-209ENST00000493510 NRXN1Q9ULB1 1477 aa10.3□□□□□ -0.76
KPNA1-209ENST00000493510 IQGAP3Q86VI3 1631 aa10.3□□□□□ -0.76
KPNA1-209ENST00000493510 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
KPNA1-209ENST00000493510 HIRIP3Q9BW71 556 aaPredicted RBP10.3□□□□□ -0.76
KPNA1-209ENST00000493510 A0A0C4DFX4 3053 aa10.3□□□□□ -0.76
KPNA1-209ENST00000493510 ANKRD30BQ9BXX2 1392 aa10.29□□□□□ -0.76
KPNA1-209ENST00000493510 ZMYND10O75800 440 aa10.29□□□□□ -0.76
KPNA1-209ENST00000493510 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
KPNA1-209ENST00000493510 BRPF1P55201 1214 aaPredicted RBP10.29□□□□□ -0.76
KPNA1-209ENST00000493510 SLC27A3Q5K4L6 730 aa10.29□□□□□ -0.76
KPNA1-209ENST00000493510 MSL1Q68DK7 614 aa10.29□□□□□ -0.76
KPNA1-209ENST00000493510 ZC3H6P61129 1189 aaKnown RBP10.28□□□□□ -0.76
KPNA1-209ENST00000493510 EVX2Q03828 476 aa10.28□□□□□ -0.76
KPNA1-209ENST00000493510 DGKZQ13574 1117 aa10.28□□□□□ -0.76
KPNA1-209ENST00000493510 DSG2Q14126 1118 aa10.28□□□□□ -0.76
KPNA1-209ENST00000493510 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms