RNA–Protein interactions for RNA: ENST00000493380.5

FRMD4A-208, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-208ENST00000493380 NBPF6Q5VWK0 638 aa18.96■□□□□ 0.63
FRMD4A-208ENST00000493380 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
FRMD4A-208ENST00000493380 NBPF4Q96M43 638 aa18.96■□□□□ 0.63
FRMD4A-208ENST00000493380 MTFR1LQ9H019 292 aa18.96■□□□□ 0.63
FRMD4A-208ENST00000493380 COL24A1Q17RW2 1714 aa18.96■□□□□ 0.63
FRMD4A-208ENST00000493380 AMPHP49418 695 aa18.95■□□□□ 0.62
FRMD4A-208ENST00000493380 SYTL4Q96C24 671 aaPredicted RBP18.95■□□□□ 0.62
FRMD4A-208ENST00000493380 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
FRMD4A-208ENST00000493380 PNPLA7Q6ZV29 1317 aa18.94■□□□□ 0.62
FRMD4A-208ENST00000493380 CARD14Q9BXL6 1004 aa18.92■□□□□ 0.62
FRMD4A-208ENST00000493380 CHD4Q14839 1912 aa18.92■□□□□ 0.62
FRMD4A-208ENST00000493380 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
FRMD4A-208ENST00000493380 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
FRMD4A-208ENST00000493380 ARXQ96QS3 562 aa18.9■□□□□ 0.62
FRMD4A-208ENST00000493380 ITGB4P16144 1822 aa18.89■□□□□ 0.61
FRMD4A-208ENST00000493380 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
FRMD4A-208ENST00000493380 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
FRMD4A-208ENST00000493380 EMILIN1Q9Y6C2 1016 aa18.88■□□□□ 0.61
FRMD4A-208ENST00000493380 C5P01031 1676 aa18.88■□□□□ 0.61
FRMD4A-208ENST00000493380 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
FRMD4A-208ENST00000493380 NSD3Q9BZ95 1437 aa18.86■□□□□ 0.61
FRMD4A-208ENST00000493380 TMF1P82094 1093 aa18.86■□□□□ 0.61
FRMD4A-208ENST00000493380 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
FRMD4A-208ENST00000493380 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
FRMD4A-208ENST00000493380 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
FRMD4A-208ENST00000493380 MAP2P11137 1827 aaKnown RBP18.85■□□□□ 0.61
FRMD4A-208ENST00000493380 PKD1L3Q7Z443 1732 aa18.85■□□□□ 0.61
FRMD4A-208ENST00000493380 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
FRMD4A-208ENST00000493380 DCAF8L1A6NGE4 600 aa18.84■□□□□ 0.61
FRMD4A-208ENST00000493380 SLC27A3Q5K4L6 730 aa18.84■□□□□ 0.61
FRMD4A-208ENST00000493380 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
FRMD4A-208ENST00000493380 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
FRMD4A-208ENST00000493380 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
FRMD4A-208ENST00000493380 INSRP06213 1382 aa18.83■□□□□ 0.61
FRMD4A-208ENST00000493380 CYP27B1O15528 508 aa18.83■□□□□ 0.6
FRMD4A-208ENST00000493380 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
FRMD4A-208ENST00000493380 MSL1Q68DK7 614 aa18.83■□□□□ 0.6
FRMD4A-208ENST00000493380 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
FRMD4A-208ENST00000493380 COL23A1Q86Y22 540 aaPredicted RBP18.82■□□□□ 0.6
FRMD4A-208ENST00000493380 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
FRMD4A-208ENST00000493380 FLT4P35916 1363 aa18.81■□□□□ 0.6
FRMD4A-208ENST00000493380 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
FRMD4A-208ENST00000493380 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
FRMD4A-208ENST00000493380 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
FRMD4A-208ENST00000493380 UBR3Q6ZT12 1888 aa18.78■□□□□ 0.6
FRMD4A-208ENST00000493380 C4BP0C0L5 1744 aa18.78■□□□□ 0.6
FRMD4A-208ENST00000493380 NCAPD2Q15021 1401 aa18.78■□□□□ 0.6
FRMD4A-208ENST00000493380 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
FRMD4A-208ENST00000493380 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
FRMD4A-208ENST00000493380 MSH5O43196 834 aa18.77■□□□□ 0.6
FRMD4A-208ENST00000493380 MPRIPQ6WCQ1 1025 aa18.77■□□□□ 0.6
FRMD4A-208ENST00000493380 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
FRMD4A-208ENST00000493380 YBX3P16989 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
FRMD4A-208ENST00000493380 GPR162Q16538 588 aa18.76■□□□□ 0.59
FRMD4A-208ENST00000493380 SLC16A10Q8TF71 515 aa18.76■□□□□ 0.59
FRMD4A-208ENST00000493380 PCDH11XQ9BZA7 1347 aa18.75■□□□□ 0.59
FRMD4A-208ENST00000493380 PCDH11YQ9BZA8 1340 aa18.75■□□□□ 0.59
FRMD4A-208ENST00000493380 POLD1P28340 1107 aa18.74■□□□□ 0.59
FRMD4A-208ENST00000493380 POLR3GLQ9BT43 218 aa18.74■□□□□ 0.59
FRMD4A-208ENST00000493380 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
FRMD4A-208ENST00000493380 PIGBQ92521 554 aa18.73■□□□□ 0.59
FRMD4A-208ENST00000493380 EYA1Q99502 592 aa18.73■□□□□ 0.59
FRMD4A-208ENST00000493380 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
FRMD4A-208ENST00000493380 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
FRMD4A-208ENST00000493380 SLC24A1O60721 1099 aa18.71■□□□□ 0.59
FRMD4A-208ENST00000493380 PCGF6Q9BYE7 350 aa18.71■□□□□ 0.59
FRMD4A-208ENST00000493380 WWC3Q9ULE0 1092 aa18.71■□□□□ 0.59
FRMD4A-208ENST00000493380 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
FRMD4A-208ENST00000493380 LINC00116Q8NCU8 138 aa18.7■□□□□ 0.58
FRMD4A-208ENST00000493380 WASHC2AQ641Q2 1341 aa18.7■□□□□ 0.58
FRMD4A-208ENST00000493380 PHF14O94880 888 aa18.69■□□□□ 0.58
FRMD4A-208ENST00000493380 ITPK1Q13572 414 aa18.68■□□□□ 0.58
FRMD4A-208ENST00000493380 EIF4A2Q14240 407 aaKnown RBP18.68■□□□□ 0.58
FRMD4A-208ENST00000493380 CDCA8Q53HL2 280 aa18.68■□□□□ 0.58
FRMD4A-208ENST00000493380 ASAP1Q9ULH1 1129 aa18.68■□□□□ 0.58
FRMD4A-208ENST00000493380 NKX1-1Q15270 411 aaPredicted RBP18.66■□□□□ 0.58
FRMD4A-208ENST00000493380 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
FRMD4A-208ENST00000493380 PHKG2P15735 406 aa18.64■□□□□ 0.57
FRMD4A-208ENST00000493380 SLC4A9Q96Q91 983 aa18.64■□□□□ 0.57
FRMD4A-208ENST00000493380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 LOC102724428A0A0B4J2F2 783 aa18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 SIK1P57059 783 aa18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 C1QTNF8P60827 252 aa18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 AK7Q96M32 723 aa18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
FRMD4A-208ENST00000493380 ATG3Q9NT62 314 aa18.62■□□□□ 0.57
FRMD4A-208ENST00000493380 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
FRMD4A-208ENST00000493380 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
FRMD4A-208ENST00000493380 COL5A3P25940 1745 aaPredicted RBP18.61■□□□□ 0.57
FRMD4A-208ENST00000493380 KDM6AO15550 1401 aaPredicted RBP18.61■□□□□ 0.57
FRMD4A-208ENST00000493380 SENP3-EIF4A1A0A087X0R7 540 aa18.61■□□□□ 0.57
FRMD4A-208ENST00000493380 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
FRMD4A-208ENST00000493380 PANK3Q9H999 370 aa18.61■□□□□ 0.57
FRMD4A-208ENST00000493380 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
FRMD4A-208ENST00000493380 KDRP35968 1356 aa18.6■□□□□ 0.57
FRMD4A-208ENST00000493380 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
FRMD4A-208ENST00000493380 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
FRMD4A-208ENST00000493380 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
FRMD4A-208ENST00000493380 C4AP0C0L4 1744 aa18.58■□□□□ 0.57
FRMD4A-208ENST00000493380 GNPATO15228 680 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms