RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 SPON1Q9HCB6 807 aa28.4■■■□□ 2.14
CLTA-208ENST00000493185 STK32BQ9NY57 414 aa28.4■■■□□ 2.14
CLTA-208ENST00000493185 SHANK3Q9BYB0 1731 aa28.4■■■□□ 2.14
CLTA-208ENST00000493185 EMILIN1Q9Y6C2 1016 aa28.38■■■□□ 2.13
CLTA-208ENST00000493185 CASZ1Q86V15 1759 aa28.37■■■□□ 2.13
CLTA-208ENST00000493185 MAP2P11137 1827 aaKnown RBP28.36■■■□□ 2.13
CLTA-208ENST00000493185 DOT1LQ8TEK3 1739 aa28.36■■■□□ 2.13
CLTA-208ENST00000493185 ANKRD26Q9UPS8 1709 aa28.36■■■□□ 2.13
CLTA-208ENST00000493185 PPM1GO15355 546 aaPredicted RBP28.36■■■□□ 2.13
CLTA-208ENST00000493185 TATP17735 454 aaPredicted RBP28.36■■■□□ 2.13
CLTA-208ENST00000493185 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
CLTA-208ENST00000493185 SLC15A2Q16348 729 aa28.34■■■□□ 2.13
CLTA-208ENST00000493185 PPP1R1BQ9UD71 204 aaPredicted RBP28.34■■■□□ 2.13
CLTA-208ENST00000493185 PRIM1P49642 420 aaKnown RBP28.32■■■□□ 2.12
CLTA-208ENST00000493185 PANK3Q9H999 370 aa28.31■■■□□ 2.12
CLTA-208ENST00000493185 PAPPAQ13219 1627 aa28.3■■■□□ 2.12
CLTA-208ENST00000493185 WASHC2AQ641Q2 1341 aa28.3■■■□□ 2.12
CLTA-208ENST00000493185 PDGFDQ9GZP0 370 aaPredicted RBP28.29■■■□□ 2.12
CLTA-208ENST00000493185 PCDH11XQ9BZA7 1347 aa28.28■■■□□ 2.12
CLTA-208ENST00000493185 PCDH11YQ9BZA8 1340 aa28.28■■■□□ 2.12
CLTA-208ENST00000493185 SLC27A3Q5K4L6 730 aa28.28■■■□□ 2.12
CLTA-208ENST00000493185 POLKQ9UBT6 870 aa28.28■■■□□ 2.12
CLTA-208ENST00000493185 ZBTB7AO95365 584 aa28.27■■■□□ 2.12
CLTA-208ENST00000493185 TNNT2P45379 298 aaPredicted RBP28.26■■■□□ 2.11
CLTA-208ENST00000493185 NSD2O96028 1365 aa28.25■■■□□ 2.11
CLTA-208ENST00000493185 LRRC4BQ9NT99 713 aa28.25■■■□□ 2.11
CLTA-208ENST00000493185 NCAPD2Q15021 1401 aa28.25■■■□□ 2.11
CLTA-208ENST00000493185 LY75O60449 1722 aa28.23■■■□□ 2.11
CLTA-208ENST00000493185 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
CLTA-208ENST00000493185 ZNF827Q17R98 1081 aa28.21■■■□□ 2.11
CLTA-208ENST00000493185 EYA1Q99502 592 aa28.21■■■□□ 2.11
CLTA-208ENST00000493185 ATF5Q9Y2D1 282 aaPredicted RBP28.21■■■□□ 2.11
CLTA-208ENST00000493185 MTFR1LQ9H019 292 aa28.2■■■□□ 2.1
CLTA-208ENST00000493185 CYP27B1O15528 508 aa28.19■■■□□ 2.1
CLTA-208ENST00000493185 SPG7Q9UQ90 795 aa28.19■■■□□ 2.1
CLTA-208ENST00000493185 KNSTRNQ9Y448 316 aa28.18■■■□□ 2.1
CLTA-208ENST00000493185 PTGER2P43116 358 aa28.17■■■□□ 2.1
CLTA-208ENST00000493185 AKT1S1Q96B36 256 aa28.17■■■□□ 2.1
CLTA-208ENST00000493185 QSER1Q2KHR3 1735 aa28.17■■■□□ 2.1
CLTA-208ENST00000493185 EIF4A2Q14240 407 aaKnown RBP28.16■■■□□ 2.1
CLTA-208ENST00000493185 MORC1Q86VD1 984 aa28.16■■■□□ 2.1
CLTA-208ENST00000493185 CCNL1Q9UK58 526 aaPredicted RBP28.16■■■□□ 2.1
CLTA-208ENST00000493185 KCNQ4P56696 695 aa28.15■■■□□ 2.1
CLTA-208ENST00000493185 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.14■■■□□ 2.11e-8■■■■□ 20.2
CLTA-208ENST00000493185 ITGB4P16144 1822 aa28.13■■■□□ 2.09
CLTA-208ENST00000493185 TOGARAM1Q9Y4F4 1720 aa28.13■■■□□ 2.09
CLTA-208ENST00000493185 MPRIPQ6WCQ1 1025 aa28.13■■■□□ 2.09
CLTA-208ENST00000493185 TFCP2L1Q9NZI6 479 aa28.13■■■□□ 2.09
CLTA-208ENST00000493185 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
CLTA-208ENST00000493185 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
CLTA-208ENST00000493185 NKX1-1Q15270 411 aaPredicted RBP28.11■■■□□ 2.09
CLTA-208ENST00000493185 TUBGCP6Q96RT7 1819 aa28.11■■■□□ 2.09
CLTA-208ENST00000493185 HMGB2P26583 209 aaKnown RBP28.09■■■□□ 2.09
CLTA-208ENST00000493185 SLC16A10Q8TF71 515 aa28.09■■■□□ 2.09
CLTA-208ENST00000493185 PALLDQ8WX93 1383 aa28.09■■■□□ 2.09
CLTA-208ENST00000493185 PLEKHG2Q9H7P9 1386 aa28.09■■■□□ 2.09
CLTA-208ENST00000493185 SGIP1Q9BQI5 828 aa28.08■■■□□ 2.09
CLTA-208ENST00000493185 PNPLA7Q6ZV29 1317 aa28.08■■■□□ 2.09
CLTA-208ENST00000493185 IGSF1Q8N6C5 1336 aa28.08■■■□□ 2.09
CLTA-208ENST00000493185 IFNL2Q8IZJ0 200 aa28.07■■■□□ 2.08
CLTA-208ENST00000493185 SMARCC1Q92922 1105 aaPredicted RBP28.07■■■□□ 2.08
CLTA-208ENST00000493185 C5P01031 1676 aa28.07■■■□□ 2.08
CLTA-208ENST00000493185 PHKG2P15735 406 aa28.05■■■□□ 2.08
CLTA-208ENST00000493185 AMER1Q5JTC6 1135 aaPredicted RBP28.05■■■□□ 2.08
CLTA-208ENST00000493185 PIGBQ92521 554 aa28.04■■■□□ 2.08
CLTA-208ENST00000493185 ARXQ96QS3 562 aa28.04■■■□□ 2.08
CLTA-208ENST00000493185 FHDC1Q9C0D6 1143 aaPredicted RBP28.03■■■□□ 2.08
CLTA-208ENST00000493185 TAF1LQ8IZX4 1826 aa28.03■■■□□ 2.08
CLTA-208ENST00000493185 TMOD3Q9NYL9 352 aa28.02■■■□□ 2.08
CLTA-208ENST00000493185 POLD1P28340 1107 aa28.01■■■□□ 2.07
CLTA-208ENST00000493185 SYT17Q9BSW7 474 aa28.01■■■□□ 2.07
CLTA-208ENST00000493185 COL24A1Q17RW2 1714 aa27.99■■■□□ 2.07
CLTA-208ENST00000493185 MSH5O43196 834 aa27.99■■■□□ 2.07
CLTA-208ENST00000493185 PLEKHO1Q53GL0 409 aaPredicted RBP27.99■■■□□ 2.07
CLTA-208ENST00000493185 HSP90AB1P08238 724 aaKnown RBP27.97■■■□□ 2.07
CLTA-208ENST00000493185 AMOTQ4VCS5 1084 aa27.97■■■□□ 2.07
CLTA-208ENST00000493185 COL23A1Q86Y22 540 aaPredicted RBP27.96■■■□□ 2.07
CLTA-208ENST00000493185 MAP3K5Q99683 1374 aa27.96■■■□□ 2.07
CLTA-208ENST00000493185 C4BP0C0L5 1744 aa27.95■■■□□ 2.07
CLTA-208ENST00000493185 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
CLTA-208ENST00000493185 LOC102724428A0A0B4J2F2 783 aa27.94■■■□□ 2.06
CLTA-208ENST00000493185 SIK1P57059 783 aa27.94■■■□□ 2.06
CLTA-208ENST00000493185 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
CLTA-208ENST00000493185 ZNF530Q6P9A1 599 aaPredicted RBP27.94■■■□□ 2.06
CLTA-208ENST00000493185 AEBP1Q8IUX7 1158 aa27.94■■■□□ 2.06
CLTA-208ENST00000493185 FLAD1Q8NFF5 587 aa27.94■■■□□ 2.06
CLTA-208ENST00000493185 IL13P35225 146 aa27.93■■■□□ 2.06
CLTA-208ENST00000493185 CC2D1BQ5T0F9 858 aaKnown RBP27.93■■■□□ 2.06
CLTA-208ENST00000493185 DCAF5Q96JK2 942 aa27.93■■■□□ 2.06
CLTA-208ENST00000493185 AK7Q96M32 723 aa27.93■■■□□ 2.06
CLTA-208ENST00000493185 ASAP1Q9ULH1 1129 aa27.93■■■□□ 2.06
CLTA-208ENST00000493185 ERVV-2B6SEH9 535 aa27.92■■■□□ 2.06
CLTA-208ENST00000493185 YY1P25490 414 aa27.92■■■□□ 2.06
CLTA-208ENST00000493185 MTHFSP49914 203 aa27.92■■■□□ 2.06
CLTA-208ENST00000493185 KDRP35968 1356 aa27.91■■■□□ 2.06
CLTA-208ENST00000493185 C1orf141Q5JVX7 400 aa27.91■■■□□ 2.06
CLTA-208ENST00000493185 KLHL34Q8N239 644 aa27.91■■■□□ 2.06
CLTA-208ENST00000493185 ATG3Q9NT62 314 aa27.89■■■□□ 2.06
CLTA-208ENST00000493185 UBR3Q6ZT12 1888 aa27.88■■■□□ 2.05
CLTA-208ENST00000493185 ATP6V1AP38606 617 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms