RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 ZBTB7AO95365 584 aa22.61■■□□□ 1.21
C9orf78-206ENST00000492991 PRIM1P49642 420 aaKnown RBP22.61■■□□□ 1.21
C9orf78-206ENST00000492991 NSD3Q9BZ95 1437 aa22.61■■□□□ 1.21
C9orf78-206ENST00000492991 MEGF6O75095 1541 aa22.61■■□□□ 1.21
C9orf78-206ENST00000492991 TATP17735 454 aaPredicted RBP22.6■■□□□ 1.21
C9orf78-206ENST00000492991 MYOM1P52179 1685 aa22.6■■□□□ 1.21
C9orf78-206ENST00000492991 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
C9orf78-206ENST00000492991 PAPPAQ13219 1627 aa22.59■■□□□ 1.21
C9orf78-206ENST00000492991 DCAF8L1A6NGE4 600 aa22.58■■□□□ 1.21
C9orf78-206ENST00000492991 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
C9orf78-206ENST00000492991 RGPD2P0DJD1 1756 aa22.58■■□□□ 1.2
C9orf78-206ENST00000492991 EIF4G2P78344 907 aaKnown RBP eCLIP22.57■■□□□ 1.2
C9orf78-206ENST00000492991 SGIP1Q9BQI5 828 aa22.57■■□□□ 1.2
C9orf78-206ENST00000492991 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
C9orf78-206ENST00000492991 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
C9orf78-206ENST00000492991 NSD2O96028 1365 aa22.56■■□□□ 1.2
C9orf78-206ENST00000492991 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
C9orf78-206ENST00000492991 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
C9orf78-206ENST00000492991 SLC16A10Q8TF71 515 aa22.56■■□□□ 1.2
C9orf78-206ENST00000492991 SYTL4Q96C24 671 aaPredicted RBP22.56■■□□□ 1.2
C9orf78-206ENST00000492991 EMILIN1Q9Y6C2 1016 aa22.55■■□□□ 1.2
C9orf78-206ENST00000492991 PCDH11XQ9BZA7 1347 aa22.55■■□□□ 1.2
C9orf78-206ENST00000492991 PCDH11YQ9BZA8 1340 aa22.55■■□□□ 1.2
C9orf78-206ENST00000492991 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
C9orf78-206ENST00000492991 ZNF827Q17R98 1081 aa22.54■■□□□ 1.2
C9orf78-206ENST00000492991 NCAPD2Q15021 1401 aa22.54■■□□□ 1.2
C9orf78-206ENST00000492991 HSPA5P11021 654 aaKnown RBP22.51■■□□□ 1.19
C9orf78-206ENST00000492991 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
C9orf78-206ENST00000492991 POLKQ9UBT6 870 aa22.51■■□□□ 1.19
C9orf78-206ENST00000492991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.5■■□□□ 1.19
C9orf78-206ENST00000492991 DOT1LQ8TEK3 1739 aa22.5■■□□□ 1.19
C9orf78-206ENST00000492991 CYP27B1O15528 508 aa22.49■■□□□ 1.19
C9orf78-206ENST00000492991 SYT17Q9BSW7 474 aa22.49■■□□□ 1.19
C9orf78-206ENST00000492991 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
C9orf78-206ENST00000492991 PPM1GO15355 546 aaPredicted RBP22.48■■□□□ 1.19
C9orf78-206ENST00000492991 NKX1-1Q15270 411 aaPredicted RBP22.48■■□□□ 1.19
C9orf78-206ENST00000492991 ARXQ96QS3 562 aa22.48■■□□□ 1.19
C9orf78-206ENST00000492991 CCNL1Q9UK58 526 aaPredicted RBP22.48■■□□□ 1.19
C9orf78-206ENST00000492991 MAP3K5Q99683 1374 aa22.48■■□□□ 1.19
C9orf78-206ENST00000492991 LY75O60449 1722 aa22.48■■□□□ 1.19
C9orf78-206ENST00000492991 EYA1Q99502 592 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 FHDC1Q9C0D6 1143 aaPredicted RBP22.47■■□□□ 1.19
C9orf78-206ENST00000492991 TFCP2L1Q9NZI6 479 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 QSER1Q2KHR3 1735 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 PNPLA7Q6ZV29 1317 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 PLEKHG2Q9H7P9 1386 aa22.47■■□□□ 1.19
C9orf78-206ENST00000492991 YY1P25490 414 aa22.45■■□□□ 1.18
C9orf78-206ENST00000492991 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
C9orf78-206ENST00000492991 PANK3Q9H999 370 aa22.45■■□□□ 1.18
C9orf78-206ENST00000492991 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
C9orf78-206ENST00000492991 KCNQ4P56696 695 aa22.44■■□□□ 1.18
C9orf78-206ENST00000492991 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
C9orf78-206ENST00000492991 POLD1P28340 1107 aa22.42■■□□□ 1.18
C9orf78-206ENST00000492991 PKD1L3Q7Z443 1732 aa22.42■■□□□ 1.18
C9orf78-206ENST00000492991 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
C9orf78-206ENST00000492991 EIF4A2Q14240 407 aaKnown RBP22.4■■□□□ 1.18
C9orf78-206ENST00000492991 COL24A1Q17RW2 1714 aa22.4■■□□□ 1.18
C9orf78-206ENST00000492991 PALLDQ8WX93 1383 aa22.39■■□□□ 1.18
C9orf78-206ENST00000492991 FLAD1Q8NFF5 587 aa22.39■■□□□ 1.17
C9orf78-206ENST00000492991 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
C9orf78-206ENST00000492991 PIGBQ92521 554 aa22.38■■□□□ 1.17
C9orf78-206ENST00000492991 TNNT2P45379 298 aaPredicted RBP22.37■■□□□ 1.17
C9orf78-206ENST00000492991 COL23A1Q86Y22 540 aaPredicted RBP22.37■■□□□ 1.17
C9orf78-206ENST00000492991 IGSF1Q8N6C5 1336 aa22.36■■□□□ 1.17
C9orf78-206ENST00000492991 PHKG2P15735 406 aa22.36■■□□□ 1.17
C9orf78-206ENST00000492991 MORC1Q86VD1 984 aa22.34■■□□□ 1.17
C9orf78-206ENST00000492991 KNSTRNQ9Y448 316 aa22.34■■□□□ 1.17
C9orf78-206ENST00000492991 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
C9orf78-206ENST00000492991 TMOD3Q9NYL9 352 aa22.33■■□□□ 1.17
C9orf78-206ENST00000492991 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
C9orf78-206ENST00000492991 ITGB4P16144 1822 aa22.32■■□□□ 1.16
C9orf78-206ENST00000492991 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
C9orf78-206ENST00000492991 C5P01031 1676 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 LOC102724428A0A0B4J2F2 783 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 ERVV-2B6SEH9 535 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 MSH5O43196 834 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 SIK1P57059 783 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 AMOTQ4VCS5 1084 aa22.3■■□□□ 1.16
C9orf78-206ENST00000492991 PLEKHO1Q53GL0 409 aaPredicted RBP22.3■■□□□ 1.16
C9orf78-206ENST00000492991 UTRNP46939 3433 aa22.28■■□□□ 1.16
C9orf78-206ENST00000492991 AMER1Q5JTC6 1135 aaPredicted RBP22.28■■□□□ 1.16
C9orf78-206ENST00000492991 DCAF5Q96JK2 942 aa22.28■■□□□ 1.16
C9orf78-206ENST00000492991 AK7Q96M32 723 aa22.28■■□□□ 1.16
C9orf78-206ENST00000492991 TAF1LQ8IZX4 1826 aa22.28■■□□□ 1.16
C9orf78-206ENST00000492991 ASAP1Q9ULH1 1129 aa22.27■■□□□ 1.16
C9orf78-206ENST00000492991 SSFA2P28290 1259 aa22.26■■□□□ 1.15
C9orf78-206ENST00000492991 GPR162Q16538 588 aa22.26■■□□□ 1.15
C9orf78-206ENST00000492991 ATG3Q9NT62 314 aa22.26■■□□□ 1.15
C9orf78-206ENST00000492991 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
C9orf78-206ENST00000492991 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
C9orf78-206ENST00000492991 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
C9orf78-206ENST00000492991 IL13P35225 146 aa22.23■■□□□ 1.15
C9orf78-206ENST00000492991 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
C9orf78-206ENST00000492991 CD2APQ9Y5K6 639 aa22.23■■□□□ 1.15
C9orf78-206ENST00000492991 KDRP35968 1356 aa22.23■■□□□ 1.15
C9orf78-206ENST00000492991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
C9orf78-206ENST00000492991 ATP6V1AP38606 617 aa22.22■■□□□ 1.15
C9orf78-206ENST00000492991 KLHL34Q8N239 644 aa22.22■■□□□ 1.15
C9orf78-206ENST00000492991 ITPK1Q13572 414 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms