RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 ADAMTS2O95450 1211 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 TOM1L2Q6ZVM7 507 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
FDPS-218ENST00000492887 CDCA7LQ96GN5 454 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
FDPS-218ENST00000492887 KDRP35968 1356 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 JCADQ9P266 1359 aa10.49□□□□□ -0.73
FDPS-218ENST00000492887 LRRC37A3O60309 1634 aa10.48□□□□□ -0.73
FDPS-218ENST00000492887 E9PSI1 815 aa10.48□□□□□ -0.73
FDPS-218ENST00000492887 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
FDPS-218ENST00000492887 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
FDPS-218ENST00000492887 RAPGEF4Q8WZA2 1011 aa10.48□□□□□ -0.73
FDPS-218ENST00000492887 PHACTR3Q96KR7 559 aa10.48□□□□□ -0.73
FDPS-218ENST00000492887 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
FDPS-218ENST00000492887 KCNA4P22459 653 aa10.47□□□□□ -0.73
FDPS-218ENST00000492887 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
FDPS-218ENST00000492887 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
FDPS-218ENST00000492887 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
FDPS-218ENST00000492887 WDR17Q8IZU2 1322 aa10.47□□□□□ -0.73
FDPS-218ENST00000492887 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
FDPS-218ENST00000492887 CACNA1FO60840 1977 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.73
FDPS-218ENST00000492887 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.73
FDPS-218ENST00000492887 C1orf141Q5JVX7 400 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 ZNF530Q6P9A1 599 aaPredicted RBP10.46□□□□□ -0.73
FDPS-218ENST00000492887 WDR63Q8IWG1 891 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 MYH16Q9H6N6 1097 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 BTG4Q9NY30 223 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 ZNF521Q96K83 1311 aa10.46□□□□□ -0.73
FDPS-218ENST00000492887 MAP3K5Q99683 1374 aa10.46□□□□□ -0.74
FDPS-218ENST00000492887 SIPA1L3O60292 1781 aaPredicted RBP10.46□□□□□ -0.74
FDPS-218ENST00000492887 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
FDPS-218ENST00000492887 NCAPD2Q15021 1401 aa10.45□□□□□ -0.74
FDPS-218ENST00000492887 SLFN5Q08AF3 891 aa10.45□□□□□ -0.74
FDPS-218ENST00000492887 USP35Q9P2H5 1018 aa10.45□□□□□ -0.74
FDPS-218ENST00000492887 TRIM35Q9UPQ4 493 aa10.45□□□□□ -0.74
FDPS-218ENST00000492887 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
FDPS-218ENST00000492887 SUPT16HQ9Y5B9 1047 aaKnown RBP10.45□□□□□ -0.74
FDPS-218ENST00000492887 ITGB4P16144 1822 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 MEGF6O75095 1541 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 CRB1P82279 1406 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 FAM83GA6ND36 823 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 GNAT3A8MTJ3 354 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 DCTN1Q14203 1278 aa10.44□□□□□ -0.74
FDPS-218ENST00000492887 THUMPD2Q9BTF0 503 aaKnown RBP10.44□□□□□ -0.74
FDPS-218ENST00000492887 HSPA1LP34931 641 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 AMOTQ4VCS5 1084 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 DUSP27Q5VZP5 1158 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
FDPS-218ENST00000492887 MCM10Q7L590 875 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
FDPS-218ENST00000492887 DOT1LQ8TEK3 1739 aa10.42□□□□□ -0.74
FDPS-218ENST00000492887 SPATA31A6Q5VVP1 1343 aa10.42□□□□□ -0.74
FDPS-218ENST00000492887 GNAI1P63096 354 aa10.42□□□□□ -0.74
FDPS-218ENST00000492887 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
FDPS-218ENST00000492887 RCAN3Q9UKA8 241 aa10.42□□□□□ -0.74
FDPS-218ENST00000492887 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
FDPS-218ENST00000492887 IL16Q14005 1332 aa10.41□□□□□ -0.74
FDPS-218ENST00000492887 FANCIQ9NVI1 1328 aa10.41□□□□□ -0.74
FDPS-218ENST00000492887 CANXP27824 592 aaKnown RBP10.41□□□□□ -0.74
FDPS-218ENST00000492887 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
FDPS-218ENST00000492887 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
FDPS-218ENST00000492887 LRP6O75581 1613 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 IL2RBP14784 551 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 TEFQ10587 303 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 NGLY1Q96IV0 654 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 IFT57Q9NWB7 429 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 ADAMTS7Q9UKP4 1686 aa10.4□□□□□ -0.74
FDPS-218ENST00000492887 OVOS2A0A0G2JMS6 1433 aa10.4□□□□□ -0.75
FDPS-218ENST00000492887 TOGARAM1Q9Y4F4 1720 aa10.39□□□□□ -0.75
FDPS-218ENST00000492887 A0A0G2JS52 829 aa10.39□□□□□ -0.75
FDPS-218ENST00000492887 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
FDPS-218ENST00000492887 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
FDPS-218ENST00000492887 MYT1Q01538 1121 aa10.39□□□□□ -0.75
FDPS-218ENST00000492887 FKBP8Q14318 412 aa10.39□□□□□ -0.75
FDPS-218ENST00000492887 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
FDPS-218ENST00000492887 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
FDPS-218ENST00000492887 SLIT2O94813 1529 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 PCDH11XQ9BZA7 1347 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 PCDH11YQ9BZA8 1340 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 EXOSC9Q06265 439 aaKnown RBP10.38□□□□□ -0.75
FDPS-218ENST00000492887 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 IFNL2Q8IZJ0 200 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 C5P01031 1676 aa10.38□□□□□ -0.75
FDPS-218ENST00000492887 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
FDPS-218ENST00000492887 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
FDPS-218ENST00000492887 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
FDPS-218ENST00000492887 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
FDPS-218ENST00000492887 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
FDPS-218ENST00000492887 PLEKHG2Q9H7P9 1386 aa10.37□□□□□ -0.75
FDPS-218ENST00000492887 RNMTO43148 476 aaKnown RBP10.36□□□□□ -0.75
FDPS-218ENST00000492887 PHKG2P15735 406 aa10.36□□□□□ -0.75
FDPS-218ENST00000492887 TRMT2AQ8IZ69 625 aaKnown RBP10.36□□□□□ -0.75
FDPS-218ENST00000492887 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
FDPS-218ENST00000492887 USP21Q9UK80 565 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms