RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
CSMD3-206ENST00000492692 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
CSMD3-206ENST00000492692 CPP00450 1065 aa13.35□□□□□ -0.27
CSMD3-206ENST00000492692 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
CSMD3-206ENST00000492692 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
CSMD3-206ENST00000492692 TEX13AQ9BXU3 409 aaPredicted RBP13.35□□□□□ -0.27
CSMD3-206ENST00000492692 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
CSMD3-206ENST00000492692 UVSSAQ2YD98 709 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
CSMD3-206ENST00000492692 EIF4G3O43432 1585 aaKnown RBP13.34□□□□□ -0.27
CSMD3-206ENST00000492692 PTPRGP23470 1445 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
CSMD3-206ENST00000492692 ANKRD50Q9ULJ7 1429 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 RAPGEF6Q8TEU7 1601 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 ERCC3P19447 782 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
CSMD3-206ENST00000492692 PPP2R5AQ15172 486 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
CSMD3-206ENST00000492692 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
CSMD3-206ENST00000492692 RPS6KL1Q9Y6S9 549 aa13.33□□□□□ -0.28
CSMD3-206ENST00000492692 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
CSMD3-206ENST00000492692 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 RINLQ6ZS11 566 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 TROQ12816 1431 aaPredicted RBP13.32□□□□□ -0.28
CSMD3-206ENST00000492692 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 TRIM66O15016 1216 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 C21orf2O43822 256 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
CSMD3-206ENST00000492692 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
CSMD3-206ENST00000492692 V9GYY5 206 aaPredicted RBP13.32□□□□□ -0.28
CSMD3-206ENST00000492692 EIF2AK4Q9P2K8 1649 aaKnown RBP13.31□□□□□ -0.28
CSMD3-206ENST00000492692 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
CSMD3-206ENST00000492692 BAG4O95429 457 aaKnown RBP13.31□□□□□ -0.28
CSMD3-206ENST00000492692 INHBEP58166 350 aa13.31□□□□□ -0.28
CSMD3-206ENST00000492692 NUCB2P80303 420 aa13.31□□□□□ -0.28
CSMD3-206ENST00000492692 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
CSMD3-206ENST00000492692 PRAG1Q86YV5 1406 aa13.31□□□□□ -0.28
CSMD3-206ENST00000492692 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
CSMD3-206ENST00000492692 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 GPS2Q13227 327 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
CSMD3-206ENST00000492692 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
CSMD3-206ENST00000492692 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
CSMD3-206ENST00000492692 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 GOLGA5Q8TBA6 731 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 PPM1EQ8WY54 764 aa13.3□□□□□ -0.28
CSMD3-206ENST00000492692 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
CSMD3-206ENST00000492692 NUP153P49790 1475 aaKnown RBP13.3□□□□□ -0.28
CSMD3-206ENST00000492692 TNNT1P13805 278 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 KRBA2Q6ZNG9 492 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 STAG1Q8WVM7 1258 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
CSMD3-206ENST00000492692 TPM4P67936 248 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 KIAA0556O60303 1618 aa13.29□□□□□ -0.28
CSMD3-206ENST00000492692 CGNL1Q0VF96 1302 aa13.28□□□□□ -0.28
CSMD3-206ENST00000492692 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
CSMD3-206ENST00000492692 PSD3Q9NYI0 1048 aa13.28□□□□□ -0.28
CSMD3-206ENST00000492692 PLXNC1O60486 1568 aa13.28□□□□□ -0.28
CSMD3-206ENST00000492692 NUP160Q12769 1436 aa13.28□□□□□ -0.28
CSMD3-206ENST00000492692 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
CSMD3-206ENST00000492692 SLFN5Q08AF3 891 aa13.27□□□□□ -0.28
CSMD3-206ENST00000492692 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.28
CSMD3-206ENST00000492692 FAM212AQ96EL1 285 aa13.27□□□□□ -0.28
CSMD3-206ENST00000492692 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.28
CSMD3-206ENST00000492692 ABCC2Q92887 1545 aa13.27□□□□□ -0.29
CSMD3-206ENST00000492692 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
CSMD3-206ENST00000492692 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
CSMD3-206ENST00000492692 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
CSMD3-206ENST00000492692 GPT2Q8TD30 523 aa13.27□□□□□ -0.29
CSMD3-206ENST00000492692 SUDS3Q9H7L9 328 aaPredicted RBP13.27□□□□□ -0.29
CSMD3-206ENST00000492692 LMBRD1Q9NUN5 540 aa13.27□□□□□ -0.29
CSMD3-206ENST00000492692 ETAA1Q9NY74 926 aa13.27□□□□□ -0.29
CSMD3-206ENST00000492692 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
CSMD3-206ENST00000492692 ABCC10Q5T3U5 1492 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 NUP155O75694 1391 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 SGSM2O43147 1006 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 ADCY2Q08462 1091 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 TATDN2Q93075 761 aa13.26□□□□□ -0.29
CSMD3-206ENST00000492692 CFDP1Q9UEE9 299 aaPredicted RBP13.26□□□□□ -0.29
CSMD3-206ENST00000492692 IVLP07476 585 aa13.25□□□□□ -0.29
CSMD3-206ENST00000492692 KMT5BQ4FZB7 885 aa13.25□□□□□ -0.29
CSMD3-206ENST00000492692 PIK3C2GO75747 1445 aa13.25□□□□□ -0.29
CSMD3-206ENST00000492692 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms