RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 EML3Q32P44 896 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 VARS2Q5ST30 1063 aaKnown RBP4.77□□□□□ -1.65
SNX13-209ENST00000492626 POTEHQ6S545 545 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 ZBTB33Q86T24 672 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 PER1O15534 1290 aaPredicted RBP4.77□□□□□ -1.65
SNX13-209ENST00000492626 FBXO45P0C2W1 286 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 AGERQ15109 404 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 UCN2Q96RP3 112 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 MKRN1Q9UHC7 482 aaKnown RBP4.77□□□□□ -1.65
SNX13-209ENST00000492626 NOD1Q9Y239 953 aa4.77□□□□□ -1.65
SNX13-209ENST00000492626 UACAQ9BZF9 1416 aa4.76□□□□□ -1.65
SNX13-209ENST00000492626 PTPRNQ16849 979 aa4.76□□□□□ -1.65
SNX13-209ENST00000492626 DZIP3Q86Y13 1208 aaKnown RBP4.76□□□□□ -1.65
SNX13-209ENST00000492626 GPSM3Q9Y4H4 160 aa4.76□□□□□ -1.65
SNX13-209ENST00000492626 JUNDP17535 347 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 EMP3P54852 163 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 ELOAQ14241 798 aaKnown RBP4.75□□□□□ -1.65
SNX13-209ENST00000492626 MAP7D1Q3KQU3 841 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 DEPDC4Q8N2C3 294 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 TRIM52Q96A61 297 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 CDCA7Q9BWT1 371 aaPredicted RBP4.75□□□□□ -1.65
SNX13-209ENST00000492626 CARNS1A5YM72 827 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 FAM196BA6NMK8 535 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 SIRT1Q96EB6 747 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 ARHGAP9Q9BRR9 750 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 VPS9D1Q9Y2B5 631 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 AXIN2Q9Y2T1 843 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 ZFYVE16Q7Z3T8 1539 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 PLEKHM2Q8IWE5 1019 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 GNEQ9Y223 722 aaKnown RBP4.75□□□□□ -1.65
SNX13-209ENST00000492626 SPHKAPQ2M3C7 1700 aa4.75□□□□□ -1.65
SNX13-209ENST00000492626 CCNYL3P0C7X3 344 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 HPS5Q9UPZ3 1129 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 SALL2Q9Y467 1007 aaPredicted RBP4.74□□□□□ -1.65
SNX13-209ENST00000492626 UGGT2Q9NYU1 1516 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 TCOF1Q13428 1488 aaKnown RBP4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L15C9J2P7 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L10C9JJH3 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L13C9JLJ4 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L12C9JPN9 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L11C9JVI0 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L21D6R901 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L18D6R9N7 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L22D6RA61 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L17D6RBQ6 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L19D6RCP7 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L20D6RJB6 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 USP17L24Q0WX57 530 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 TMEM164Q5U3C3 297 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 RNF20Q5VTR2 975 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 NUDT12Q9BQG2 462 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 ATP2B4P23634 1241 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 SRPK2P78362 688 aaKnown RBP4.74□□□□□ -1.65
SNX13-209ENST00000492626 PDXDC2PQ6P474 469 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 CCDC24Q8N4L8 307 aa4.74□□□□□ -1.65
SNX13-209ENST00000492626 TK2O00142 265 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 NCOA4Q13772 614 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 ZNF326Q5BKZ1 582 aaKnown RBP4.73□□□□□ -1.65
SNX13-209ENST00000492626 ANKMY2Q8IV38 441 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 ZNF594Q96JF6 807 aaPredicted RBP4.73□□□□□ -1.65
SNX13-209ENST00000492626 RNF19BQ6ZMZ0 732 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 PLPP7Q8NBV4 271 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 NWD1Q149M9 1564 aa4.73□□□□□ -1.65
SNX13-209ENST00000492626 DNAAF2Q9NVR5 837 aaKnown RBP4.72□□□□□ -1.65
SNX13-209ENST00000492626 MAP10Q9P2G4 905 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 USP35Q9P2H5 1018 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 RAD54L2Q9Y4B4 1467 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 SHPRHQ149N8 1683 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 TMEM88BA6NKF7 163 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 OXLD1Q5BKU9 147 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 SCUBE3Q8IX30 993 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 OGFOD1Q8N543 542 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 STK32AQ8WU08 396 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 TSR3Q9UJK0 312 aaKnown RBP4.72□□□□□ -1.65
SNX13-209ENST00000492626 DOLKQ9UPQ8 538 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 MAGEB6P1A0A0J9YX57 407 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 PIK3CDO00329 1044 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 ABL1P00519 1130 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 DMRTA1Q5VZB9 504 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 BRICD5Q6PL45 260 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 VTI1AQ96AJ9 217 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 CD109Q6YHK3 1445 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 ABCC3O15438 1527 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 C3P01024 1663 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 RAPGEF2Q9Y4G8 1499 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 SUPT6HQ7KZ85 1726 aaKnown RBP4.72□□□□□ -1.65
SNX13-209ENST00000492626 MARSP56192 900 aaKnown RBP4.72□□□□□ -1.65
SNX13-209ENST00000492626 SWI5Q1ZZU3 235 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 BLOC1S3Q6QNY0 202 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 SLC10A4Q96EP9 437 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 CARD14Q9BXL6 1004 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 CEP126Q9P2H0 1117 aa4.72□□□□□ -1.65
SNX13-209ENST00000492626 UNC13BO14795 1591 aa4.71□□□□□ -1.65
SNX13-209ENST00000492626 FGD6Q6ZV73 1430 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 GPR37L1O60883 481 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 ITGAEP38570 1179 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 KANK4Q5T7N3 995 aaPredicted RBP4.71□□□□□ -1.66
SNX13-209ENST00000492626 CCDC125Q86Z20 511 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 KDM5DQ9BY66 1539 aa4.71□□□□□ -1.66
SNX13-209ENST00000492626 FAM205CA6NFA0 338 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms