RNA–Protein interactions for RNA: ENST00000492612.6

TRIT1-212, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-212ENST00000492612 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
TRIT1-212ENST00000492612 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
TRIT1-212ENST00000492612 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
TRIT1-212ENST00000492612 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
TRIT1-212ENST00000492612 ARXQ96QS3 562 aa17.1■□□□□ 0.33
TRIT1-212ENST00000492612 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
TRIT1-212ENST00000492612 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
TRIT1-212ENST00000492612 RTL1A6NKG5 1358 aa17.08■□□□□ 0.32
TRIT1-212ENST00000492612 HSP90AB2PQ58FF8 381 aa17.08■□□□□ 0.32
TRIT1-212ENST00000492612 SLC27A3Q5K4L6 730 aa17.08■□□□□ 0.32
TRIT1-212ENST00000492612 NSD2O96028 1365 aa17.07■□□□□ 0.32
TRIT1-212ENST00000492612 RAPGEF4Q8WZA2 1011 aa17.07■□□□□ 0.32
TRIT1-212ENST00000492612 SMG6Q86US8 1419 aaKnown RBP17.06■□□□□ 0.32
TRIT1-212ENST00000492612 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
TRIT1-212ENST00000492612 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
TRIT1-212ENST00000492612 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
TRIT1-212ENST00000492612 TATP17735 454 aaPredicted RBP17.05■□□□□ 0.32
TRIT1-212ENST00000492612 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
TRIT1-212ENST00000492612 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
TRIT1-212ENST00000492612 MSH5O43196 834 aa17.04■□□□□ 0.32
TRIT1-212ENST00000492612 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
TRIT1-212ENST00000492612 NSD3Q9BZ95 1437 aa17.04■□□□□ 0.32
TRIT1-212ENST00000492612 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
TRIT1-212ENST00000492612 POLD1P28340 1107 aa17.03■□□□□ 0.32
TRIT1-212ENST00000492612 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
TRIT1-212ENST00000492612 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
TRIT1-212ENST00000492612 INSRP06213 1382 aa17.02■□□□□ 0.32
TRIT1-212ENST00000492612 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
TRIT1-212ENST00000492612 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
TRIT1-212ENST00000492612 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
TRIT1-212ENST00000492612 FLT4P35916 1363 aa17.02■□□□□ 0.31
TRIT1-212ENST00000492612 LY75O60449 1722 aa17.01■□□□□ 0.31
TRIT1-212ENST00000492612 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
TRIT1-212ENST00000492612 CGNL1Q0VF96 1302 aa17■□□□□ 0.31
TRIT1-212ENST00000492612 GPR162Q16538 588 aa17■□□□□ 0.31
TRIT1-212ENST00000492612 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
TRIT1-212ENST00000492612 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
TRIT1-212ENST00000492612 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
TRIT1-212ENST00000492612 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
TRIT1-212ENST00000492612 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
TRIT1-212ENST00000492612 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
TRIT1-212ENST00000492612 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
TRIT1-212ENST00000492612 CYP27B1O15528 508 aa16.98■□□□□ 0.31
TRIT1-212ENST00000492612 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
TRIT1-212ENST00000492612 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
TRIT1-212ENST00000492612 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
TRIT1-212ENST00000492612 PALLDQ8WX93 1383 aa16.96■□□□□ 0.31
TRIT1-212ENST00000492612 TNNT2P45379 298 aaPredicted RBP16.95■□□□□ 0.3
TRIT1-212ENST00000492612 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
TRIT1-212ENST00000492612 TOGARAM1Q9Y4F4 1720 aa16.93■□□□□ 0.3
TRIT1-212ENST00000492612 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
TRIT1-212ENST00000492612 EYA1Q99502 592 aa16.93■□□□□ 0.3
TRIT1-212ENST00000492612 C5P01031 1676 aa16.93■□□□□ 0.3
TRIT1-212ENST00000492612 CHD4Q14839 1912 aa16.92■□□□□ 0.3
TRIT1-212ENST00000492612 PIGBQ92521 554 aa16.91■□□□□ 0.3
TRIT1-212ENST00000492612 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
TRIT1-212ENST00000492612 TIMELESSQ9UNS1 1208 aa16.91■□□□□ 0.3
TRIT1-212ENST00000492612 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
TRIT1-212ENST00000492612 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
TRIT1-212ENST00000492612 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
TRIT1-212ENST00000492612 PHF14O94880 888 aa16.9■□□□□ 0.3
TRIT1-212ENST00000492612 SMARCC1Q92922 1105 aaPredicted RBP16.9■□□□□ 0.3
TRIT1-212ENST00000492612 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
TRIT1-212ENST00000492612 ITGB4P16144 1822 aa16.9■□□□□ 0.3
TRIT1-212ENST00000492612 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
TRIT1-212ENST00000492612 AK7Q96M32 723 aa16.89■□□□□ 0.29
TRIT1-212ENST00000492612 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
TRIT1-212ENST00000492612 ANKRD26Q9UPS8 1709 aa16.88■□□□□ 0.29
TRIT1-212ENST00000492612 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.292e-7■□□□□ 9.6
TRIT1-212ENST00000492612 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
TRIT1-212ENST00000492612 C4BP0C0L5 1744 aa16.87■□□□□ 0.29
TRIT1-212ENST00000492612 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
TRIT1-212ENST00000492612 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
TRIT1-212ENST00000492612 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
TRIT1-212ENST00000492612 FLAD1Q8NFF5 587 aa16.87■□□□□ 0.29
TRIT1-212ENST00000492612 TMOD3Q9NYL9 352 aa16.87■□□□□ 0.29
TRIT1-212ENST00000492612 ASAP1Q9ULH1 1129 aa16.86■□□□□ 0.29
TRIT1-212ENST00000492612 LOC102724428A0A0B4J2F2 783 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 PHKG2P15735 406 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 SIK1P57059 783 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRIT1-212ENST00000492612 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 LINC00116Q8NCU8 138 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 PANK3Q9H999 370 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
TRIT1-212ENST00000492612 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.84■□□□□ 0.29
TRIT1-212ENST00000492612 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
TRIT1-212ENST00000492612 SENP3-EIF4A1A0A087X0R7 540 aa16.83■□□□□ 0.28
TRIT1-212ENST00000492612 HMGB2P26583 209 aaKnown RBP16.83■□□□□ 0.28
TRIT1-212ENST00000492612 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
TRIT1-212ENST00000492612 ITPK1Q13572 414 aa16.83■□□□□ 0.28
TRIT1-212ENST00000492612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.284e-6■□□□□ 11.2
TRIT1-212ENST00000492612 GNPATO15228 680 aa16.82■□□□□ 0.28
TRIT1-212ENST00000492612 GRIN3BO60391 1043 aa16.82■□□□□ 0.28
TRIT1-212ENST00000492612 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
TRIT1-212ENST00000492612 ATG3Q9NT62 314 aa16.81■□□□□ 0.28
TRIT1-212ENST00000492612 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
TRIT1-212ENST00000492612 UBR3Q6ZT12 1888 aa16.81■□□□□ 0.28
TRIT1-212ENST00000492612 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
TRIT1-212ENST00000492612 IGSF1Q8N6C5 1336 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms