RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
PTPRE-210ENST00000492479 LARP1Q6PKG0 1096 aaKnown RBP17.94■□□□□ 0.46
PTPRE-210ENST00000492479 BCL9LQ86UU0 1499 aa17.94■□□□□ 0.46
PTPRE-210ENST00000492479 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
PTPRE-210ENST00000492479 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
PTPRE-210ENST00000492479 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
PTPRE-210ENST00000492479 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-210ENST00000492479 TOM1L2Q6ZVM7 507 aa17.93■□□□□ 0.46
PTPRE-210ENST00000492479 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
PTPRE-210ENST00000492479 SHANK3Q9BYB0 1731 aa17.92■□□□□ 0.46
PTPRE-210ENST00000492479 TATP17735 454 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-210ENST00000492479 EVA1CP58658 441 aa17.92■□□□□ 0.46
PTPRE-210ENST00000492479 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
PTPRE-210ENST00000492479 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
PTPRE-210ENST00000492479 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
PTPRE-210ENST00000492479 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
PTPRE-210ENST00000492479 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
PTPRE-210ENST00000492479 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
PTPRE-210ENST00000492479 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
PTPRE-210ENST00000492479 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
PTPRE-210ENST00000492479 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
PTPRE-210ENST00000492479 FBXO41Q8TF61 875 aa17.9■□□□□ 0.46
PTPRE-210ENST00000492479 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
PTPRE-210ENST00000492479 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 GNAT3A8MTJ3 354 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 IL2RBP14784 551 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.45
PTPRE-210ENST00000492479 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
PTPRE-210ENST00000492479 STRN4Q9NRL3 753 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 SPATA31A1Q5TZJ5 1347 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
PTPRE-210ENST00000492479 VPS72Q15906 364 aa17.88■□□□□ 0.45
PTPRE-210ENST00000492479 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
PTPRE-210ENST00000492479 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
PTPRE-210ENST00000492479 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
PTPRE-210ENST00000492479 SIPA1L3O60292 1781 aaPredicted RBP17.87■□□□□ 0.45
PTPRE-210ENST00000492479 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
PTPRE-210ENST00000492479 MRC1P22897 1456 aa17.87■□□□□ 0.45
PTPRE-210ENST00000492479 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-210ENST00000492479 BARGINQ6ZT62 677 aa17.86■□□□□ 0.45
PTPRE-210ENST00000492479 GNAI1P63096 354 aa17.85■□□□□ 0.45
PTPRE-210ENST00000492479 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
PTPRE-210ENST00000492479 NGLY1Q96IV0 654 aa17.85■□□□□ 0.45
PTPRE-210ENST00000492479 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
PTPRE-210ENST00000492479 TNS2Q63HR2 1409 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 PCDH11XQ9BZA7 1347 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 PCDH11YQ9BZA8 1340 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-210ENST00000492479 PHKG2P15735 406 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 IL17REQ8NFR9 667 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 C8orf37Q96NL8 207 aa17.84■□□□□ 0.45
PTPRE-210ENST00000492479 ATRNO75882 1429 aa17.83■□□□□ 0.45
PTPRE-210ENST00000492479 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.44
PTPRE-210ENST00000492479 CHL1O00533 1208 aa17.83■□□□□ 0.44
PTPRE-210ENST00000492479 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
PTPRE-210ENST00000492479 NKX1-1Q15270 411 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-210ENST00000492479 C1orf141Q5JVX7 400 aa17.83■□□□□ 0.44
PTPRE-210ENST00000492479 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.44
PTPRE-210ENST00000492479 ZCRB1Q8TBF4 217 aaKnown RBP17.83■□□□□ 0.44
PTPRE-210ENST00000492479 THSD7AQ9UPZ6 1657 aa17.83■□□□□ 0.44
PTPRE-210ENST00000492479 KDM6AO15550 1401 aaPredicted RBP17.82■□□□□ 0.44
PTPRE-210ENST00000492479 KDM3BQ7LBC6 1761 aa17.82■□□□□ 0.44
PTPRE-210ENST00000492479 CYP27B1O15528 508 aa17.82■□□□□ 0.44
PTPRE-210ENST00000492479 MCM10Q7L590 875 aa17.81■□□□□ 0.44
PTPRE-210ENST00000492479 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
PTPRE-210ENST00000492479 RNF123Q5XPI4 1314 aa17.8■□□□□ 0.44
PTPRE-210ENST00000492479 GLI3P10071 1580 aa17.8■□□□□ 0.44
PTPRE-210ENST00000492479 RNMTO43148 476 aaKnown RBP17.8■□□□□ 0.44
PTPRE-210ENST00000492479 DCTN1Q14203 1278 aa17.8■□□□□ 0.44
PTPRE-210ENST00000492479 DCAF5Q96JK2 942 aa17.8■□□□□ 0.44
PTPRE-210ENST00000492479 USP21Q9UK80 565 aa17.8■□□□□ 0.44
PTPRE-210ENST00000492479 AFF2P51816 1311 aa17.79■□□□□ 0.44
PTPRE-210ENST00000492479 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
PTPRE-210ENST00000492479 MBIPQ9NS73 344 aa17.78■□□□□ 0.44
PTPRE-210ENST00000492479 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
PTPRE-210ENST00000492479 ZNF428Q96B54 188 aa17.77■□□□□ 0.44
PTPRE-210ENST00000492479 SOS1Q07889 1333 aaPredicted RBP17.76■□□□□ 0.43
PTPRE-210ENST00000492479 TOGARAM1Q9Y4F4 1720 aa17.76■□□□□ 0.43
PTPRE-210ENST00000492479 ONECUT3O60422 494 aaPredicted RBP17.76■□□□□ 0.43
PTPRE-210ENST00000492479 LGR6Q9HBX8 967 aa17.76■□□□□ 0.43
PTPRE-210ENST00000492479 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
PTPRE-210ENST00000492479 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
PTPRE-210ENST00000492479 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
PTPRE-210ENST00000492479 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
PTPRE-210ENST00000492479 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
PTPRE-210ENST00000492479 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
PTPRE-210ENST00000492479 ERVV-2B6SEH9 535 aa17.74■□□□□ 0.43
PTPRE-210ENST00000492479 EXOC5O00471 708 aa17.74■□□□□ 0.43
PTPRE-210ENST00000492479 BCL9O00512 1426 aa17.73■□□□□ 0.43
PTPRE-210ENST00000492479 TEFQ10587 303 aa17.73■□□□□ 0.43
PTPRE-210ENST00000492479 GJD4Q96KN9 370 aaPredicted RBP17.73■□□□□ 0.43
PTPRE-210ENST00000492479 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
PTPRE-210ENST00000492479 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
PTPRE-210ENST00000492479 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
PTPRE-210ENST00000492479 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms