RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZNF784Q8NCA9 323 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P30-201ENST00000492455 ITGB2P05107 769 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 PNMA1Q8ND90 353 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 PSMG3-AS1Q96PY0 264 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
HMGB1P30-201ENST00000492455 RHOQP17081 205 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 MX2P20592 715 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 CLK2P49760 499 aaKnown RBP6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 ACDQ96AP0 544 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 MKL2Q9ULH7 1088 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 GPSM3Q9Y4H4 160 aa6.67□□□□□ -1.34
HMGB1P30-201ENST00000492455 RNF144AP50876 292 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 ZC3H15Q8WU90 426 aaKnown RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 GTPBP3Q969Y2 492 aaKnown RBP6.66□□□□□ -1.34
HMGB1P30-201ENST00000492455 TRIM66O15016 1216 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 FURINP09958 794 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 DZIP3Q86Y13 1208 aaKnown RBP6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 ADAM32Q8TC27 787 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 GAS2L1Q99501 681 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 RSPH6AQ9H0K4 717 aa6.65□□□□□ -1.34
HMGB1P30-201ENST00000492455 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 PIK3R2O00459 728 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 OIP5O43482 229 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 MAP2K3P46734 347 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 CTDSPL2Q05D32 466 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 DBN1Q16643 649 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
HMGB1P30-201ENST00000492455 MEN1O00255 615 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 GPC1P35052 558 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 AK7Q96M32 723 aa6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P30-201ENST00000492455 KRBA1A5PL33 1030 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 ATP5J2-PTCD1G3V325 749 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 LILRA1O75019 489 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 ADD1P35611 737 aaKnown RBP6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 SLC27A3Q5K4L6 730 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 CYLDQ9NQC7 956 aa6.62□□□□□ -1.35
HMGB1P30-201ENST00000492455 NR6A1Q15406 480 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 LRRN4Q8WUT4 740 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 NLRP3Q96P20 1036 aa6.61□□□□□ -1.35
HMGB1P30-201ENST00000492455 SNRPNP63162 240 aaKnown RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 PPP2R2DQ66LE6 453 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 KDF1Q8NAX2 398 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 POLR3EQ9NVU0 708 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
HMGB1P30-201ENST00000492455 AMPD1P23109 780 aa6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 GRIN2CQ14957 1233 aa6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 GDF2Q9UK05 429 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P30-201ENST00000492455 POU4F2Q12837 409 aa6.58□□□□□ -1.36
HMGB1P30-201ENST00000492455 ESPNB1AK53 854 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 F11P03951 625 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
HMGB1P30-201ENST00000492455 A0A1W2PRU2 124 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 PDE4DQ08499 809 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 WDR44Q5JSH3 913 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 NBPF15Q8N660 670 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 ESF1Q9H501 851 aaKnown RBP6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
HMGB1P30-201ENST00000492455 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 COL8A1P27658 744 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 TAS1R3Q7RTX0 852 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 CCDC125Q86Z20 511 aa6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 NOP53Q9NZM5 478 aaKnown RBP6.55□□□□□ -1.36
HMGB1P30-201ENST00000492455 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 GNB5O14775 395 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 KLRG1Q96E93 195 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
HMGB1P30-201ENST00000492455 C1QTNF9BB2RNN3 333 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 AP1G2O75843 785 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 SEMA6BQ9H3T3 888 aa6.53□□□□□ -1.36
HMGB1P30-201ENST00000492455 SPATA31C2B4DYI2 1134 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 BMP4P12644 408 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 CC2D2BQ6DHV5 1058 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 GRIP2Q9C0E4 1043 aa6.52□□□□□ -1.37
HMGB1P30-201ENST00000492455 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 SCO2A0A1W2PP80 73 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 CSB-PGBD3P0DP91 1061 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 CLN3Q13286 438 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 RNF20Q5VTR2 975 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 PGBD3Q8N328 593 aa6.51□□□□□ -1.37
HMGB1P30-201ENST00000492455 BRPF1P55201 1214 aaPredicted RBP6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 LBRQ14739 615 aaKnown RBP6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 SLCO4C1Q6ZQN7 724 aa6.5□□□□□ -1.37
HMGB1P30-201ENST00000492455 CD163Q86VB7 1156 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms