RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 LY75O60449 1722 aa17.67■□□□□ 0.42
TREX1-204ENST00000492235 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
TREX1-204ENST00000492235 SHANK3Q9BYB0 1731 aa17.67■□□□□ 0.42
TREX1-204ENST00000492235 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
TREX1-204ENST00000492235 FBLN1P23142 703 aa17.66■□□□□ 0.42
TREX1-204ENST00000492235 COG3Q96JB2 828 aa17.66■□□□□ 0.42
TREX1-204ENST00000492235 MAP3K19Q56UN5 1328 aa17.66■□□□□ 0.42
TREX1-204ENST00000492235 HOXC9P31274 260 aa17.65■□□□□ 0.42
TREX1-204ENST00000492235 AMPHP49418 695 aa17.65■□□□□ 0.42
TREX1-204ENST00000492235 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
TREX1-204ENST00000492235 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.41
TREX1-204ENST00000492235 NSD2O96028 1365 aa17.64■□□□□ 0.41
TREX1-204ENST00000492235 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
TREX1-204ENST00000492235 MEGF6O75095 1541 aa17.63■□□□□ 0.41
TREX1-204ENST00000492235 NLGN2Q8NFZ4 835 aa17.63■□□□□ 0.41
TREX1-204ENST00000492235 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
TREX1-204ENST00000492235 MSH5O43196 834 aa17.61■□□□□ 0.41
TREX1-204ENST00000492235 TESK2Q96S53 571 aa17.61■□□□□ 0.41
TREX1-204ENST00000492235 ST20-MTHFSA0A0A6YYL1 179 aa17.6■□□□□ 0.41
TREX1-204ENST00000492235 USP47Q96K76 1375 aa17.59■□□□□ 0.41
TREX1-204ENST00000492235 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
TREX1-204ENST00000492235 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
TREX1-204ENST00000492235 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
TREX1-204ENST00000492235 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.41
TREX1-204ENST00000492235 NBPF6Q5VWK0 638 aa17.58■□□□□ 0.4
TREX1-204ENST00000492235 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
TREX1-204ENST00000492235 NBPF4Q96M43 638 aa17.58■□□□□ 0.4
TREX1-204ENST00000492235 RTL1A6NKG5 1358 aa17.57■□□□□ 0.4
TREX1-204ENST00000492235 C5P01031 1676 aa17.56■□□□□ 0.4
TREX1-204ENST00000492235 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.4
TREX1-204ENST00000492235 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
TREX1-204ENST00000492235 GGNBP2Q9H3C7 697 aa17.56■□□□□ 0.4
TREX1-204ENST00000492235 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
TREX1-204ENST00000492235 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
TREX1-204ENST00000492235 CGNL1Q0VF96 1302 aa17.54■□□□□ 0.4
TREX1-204ENST00000492235 FYB1O15117 783 aa17.54■□□□□ 0.4
TREX1-204ENST00000492235 GRIN3BO60391 1043 aa17.53■□□□□ 0.4
TREX1-204ENST00000492235 TATP17735 454 aaPredicted RBP17.53■□□□□ 0.4
TREX1-204ENST00000492235 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
TREX1-204ENST00000492235 TAF1LQ8IZX4 1826 aa17.51■□□□□ 0.39
TREX1-204ENST00000492235 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
TREX1-204ENST00000492235 KIF20BQ96Q89 1820 aa17.51■□□□□ 0.39
TREX1-204ENST00000492235 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
TREX1-204ENST00000492235 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
TREX1-204ENST00000492235 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
TREX1-204ENST00000492235 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
TREX1-204ENST00000492235 TMF1P82094 1093 aa17.49■□□□□ 0.39
TREX1-204ENST00000492235 INSRP06213 1382 aa17.49■□□□□ 0.39
TREX1-204ENST00000492235 TOGARAM1Q9Y4F4 1720 aa17.49■□□□□ 0.39
TREX1-204ENST00000492235 ITGB4P16144 1822 aa17.49■□□□□ 0.39
TREX1-204ENST00000492235 FLT4P35916 1363 aa17.48■□□□□ 0.39
TREX1-204ENST00000492235 C4BP0C0L5 1744 aa17.47■□□□□ 0.39
TREX1-204ENST00000492235 CYP27B1O15528 508 aa17.47■□□□□ 0.39
TREX1-204ENST00000492235 FLAD1Q8NFF5 587 aa17.47■□□□□ 0.39
TREX1-204ENST00000492235 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
TREX1-204ENST00000492235 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
TREX1-204ENST00000492235 PKD1L3Q7Z443 1732 aa17.45■□□□□ 0.38
TREX1-204ENST00000492235 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
TREX1-204ENST00000492235 SMIM5Q71RC9 77 aa17.45■□□□□ 0.38
TREX1-204ENST00000492235 AK7Q96M32 723 aa17.45■□□□□ 0.38
TREX1-204ENST00000492235 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
TREX1-204ENST00000492235 PHF14O94880 888 aa17.44■□□□□ 0.38
TREX1-204ENST00000492235 AMIGO3Q86WK7 504 aa17.44■□□□□ 0.38
TREX1-204ENST00000492235 SMARCC1Q92922 1105 aaPredicted RBP17.44■□□□□ 0.38
TREX1-204ENST00000492235 EMILIN1Q9Y6C2 1016 aa17.44■□□□□ 0.38
TREX1-204ENST00000492235 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
TREX1-204ENST00000492235 WWC3Q9ULE0 1092 aa17.43■□□□□ 0.38
TREX1-204ENST00000492235 PIGBQ92521 554 aa17.42■□□□□ 0.38
TREX1-204ENST00000492235 CEP350Q5VT06 3117 aa17.41■□□□□ 0.38
TREX1-204ENST00000492235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.41■□□□□ 0.38
TREX1-204ENST00000492235 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
TREX1-204ENST00000492235 GPBP1L1Q9HC44 474 aaPredicted RBP17.41■□□□□ 0.38
TREX1-204ENST00000492235 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
TREX1-204ENST00000492235 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
TREX1-204ENST00000492235 ZNF526Q8TF50 670 aaPredicted RBP17.4■□□□□ 0.38
TREX1-204ENST00000492235 CARD14Q9BXL6 1004 aa17.4■□□□□ 0.38
TREX1-204ENST00000492235 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
TREX1-204ENST00000492235 MAP2P11137 1827 aaKnown RBP17.4■□□□□ 0.38
TREX1-204ENST00000492235 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
TREX1-204ENST00000492235 SPG7Q9UQ90 795 aa17.39■□□□□ 0.37
TREX1-204ENST00000492235 ADCY9O60503 1353 aa17.39■□□□□ 0.37
TREX1-204ENST00000492235 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
TREX1-204ENST00000492235 SIK1P57059 783 aa17.38■□□□□ 0.37
TREX1-204ENST00000492235 NKX1-1Q15270 411 aaPredicted RBP17.38■□□□□ 0.37
TREX1-204ENST00000492235 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
TREX1-204ENST00000492235 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
TREX1-204ENST00000492235 SSFA2P28290 1259 aa17.37■□□□□ 0.37
TREX1-204ENST00000492235 TMOD3Q9NYL9 352 aa17.36■□□□□ 0.37
TREX1-204ENST00000492235 ASAP1Q9ULH1 1129 aa17.36■□□□□ 0.37
TREX1-204ENST00000492235 GNPATO15228 680 aa17.35■□□□□ 0.37
TREX1-204ENST00000492235 ITPK1Q13572 414 aa17.35■□□□□ 0.37
TREX1-204ENST00000492235 EYA1Q99502 592 aa17.35■□□□□ 0.37
TREX1-204ENST00000492235 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
TREX1-204ENST00000492235 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
TREX1-204ENST00000492235 PHKG2P15735 406 aa17.33■□□□□ 0.36
TREX1-204ENST00000492235 IFNL2Q8IZJ0 200 aa17.33■□□□□ 0.36
TREX1-204ENST00000492235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
TREX1-204ENST00000492235 HSPA6P17066 643 aa17.32■□□□□ 0.36
TREX1-204ENST00000492235 ATG3Q9NT62 314 aa17.31■□□□□ 0.36
TREX1-204ENST00000492235 MMP10P09238 476 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms