RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
MRPL55-231ENST00000492170 LRRC4BQ9NT99 713 aa21.34■■□□□ 1.01
MRPL55-231ENST00000492170 CGNL1Q0VF96 1302 aa21.33■■□□□ 1.01
MRPL55-231ENST00000492170 YY1P25490 414 aa21.33■■□□□ 1.01
MRPL55-231ENST00000492170 ZNF827Q17R98 1081 aa21.33■■□□□ 1.01
MRPL55-231ENST00000492170 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
MRPL55-231ENST00000492170 INSRP06213 1382 aa21.33■■□□□ 1
MRPL55-231ENST00000492170 FLT4P35916 1363 aa21.33■■□□□ 1
MRPL55-231ENST00000492170 KIF24Q5T7B8 1368 aa21.33■■□□□ 1
MRPL55-231ENST00000492170 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
MRPL55-231ENST00000492170 NSD3Q9BZ95 1437 aa21.32■■□□□ 1
MRPL55-231ENST00000492170 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
MRPL55-231ENST00000492170 SHANK3Q9BYB0 1731 aa21.32■■□□□ 1
MRPL55-231ENST00000492170 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
MRPL55-231ENST00000492170 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
MRPL55-231ENST00000492170 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
MRPL55-231ENST00000492170 NSD2O96028 1365 aa21.29■■□□□ 1
MRPL55-231ENST00000492170 SGIP1Q9BQI5 828 aa21.29■■□□□ 1
MRPL55-231ENST00000492170 CARD14Q9BXL6 1004 aa21.29■■□□□ 1
MRPL55-231ENST00000492170 FHDC1Q9C0D6 1143 aaPredicted RBP21.29■■□□□ 1
MRPL55-231ENST00000492170 AKT1S1Q96B36 256 aa21.28■■□□□ 1
MRPL55-231ENST00000492170 ARXQ96QS3 562 aa21.26■□□□□ 0.99
MRPL55-231ENST00000492170 SYT17Q9BSW7 474 aa21.26■□□□□ 0.99
MRPL55-231ENST00000492170 PCDH11XQ9BZA7 1347 aa21.26■□□□□ 0.99
MRPL55-231ENST00000492170 PCDH11YQ9BZA8 1340 aa21.26■□□□□ 0.99
MRPL55-231ENST00000492170 LY75O60449 1722 aa21.25■□□□□ 0.99
MRPL55-231ENST00000492170 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
MRPL55-231ENST00000492170 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
MRPL55-231ENST00000492170 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
MRPL55-231ENST00000492170 KCNQ4P56696 695 aa21.24■□□□□ 0.99
MRPL55-231ENST00000492170 TFCP2L1Q9NZI6 479 aa21.24■□□□□ 0.99
MRPL55-231ENST00000492170 CCNL1Q9UK58 526 aaPredicted RBP21.23■□□□□ 0.99
MRPL55-231ENST00000492170 PNPLA7Q6ZV29 1317 aa21.23■□□□□ 0.99
MRPL55-231ENST00000492170 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
MRPL55-231ENST00000492170 MAP3K5Q99683 1374 aa21.22■□□□□ 0.99
MRPL55-231ENST00000492170 POLR3GLQ9BT43 218 aa21.21■□□□□ 0.99
MRPL55-231ENST00000492170 POLD1P28340 1107 aa21.2■□□□□ 0.98
MRPL55-231ENST00000492170 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
MRPL55-231ENST00000492170 NCAPD2Q15021 1401 aa21.19■□□□□ 0.98
MRPL55-231ENST00000492170 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
MRPL55-231ENST00000492170 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
MRPL55-231ENST00000492170 CYP27B1O15528 508 aa21.17■□□□□ 0.98
MRPL55-231ENST00000492170 HMGB2P26583 209 aaKnown RBP21.17■□□□□ 0.98
MRPL55-231ENST00000492170 PKD1L3Q7Z443 1732 aa21.17■□□□□ 0.98
MRPL55-231ENST00000492170 PALLDQ8WX93 1383 aa21.16■□□□□ 0.98
MRPL55-231ENST00000492170 EIF4G2P78344 907 aaKnown RBP eCLIP21.16■□□□□ 0.98
MRPL55-231ENST00000492170 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
MRPL55-231ENST00000492170 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
MRPL55-231ENST00000492170 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
MRPL55-231ENST00000492170 UTRNP46939 3433 aa21.14■□□□□ 0.98
MRPL55-231ENST00000492170 MSH5O43196 834 aa21.14■□□□□ 0.97
MRPL55-231ENST00000492170 POLKQ9UBT6 870 aa21.14■□□□□ 0.97
MRPL55-231ENST00000492170 COL24A1Q17RW2 1714 aa21.14■□□□□ 0.97
MRPL55-231ENST00000492170 MAP2P11137 1827 aaKnown RBP21.13■□□□□ 0.97
MRPL55-231ENST00000492170 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
MRPL55-231ENST00000492170 EYA1Q99502 592 aa21.13■□□□□ 0.97
MRPL55-231ENST00000492170 TOGARAM1Q9Y4F4 1720 aa21.12■□□□□ 0.97
MRPL55-231ENST00000492170 C5P01031 1676 aa21.12■□□□□ 0.97
MRPL55-231ENST00000492170 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
MRPL55-231ENST00000492170 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-231ENST00000492170 NKX1-1Q15270 411 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-231ENST00000492170 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
MRPL55-231ENST00000492170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
MRPL55-231ENST00000492170 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
MRPL55-231ENST00000492170 GPR162Q16538 588 aa21.09■□□□□ 0.97
MRPL55-231ENST00000492170 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
MRPL55-231ENST00000492170 ITGB4P16144 1822 aa21.08■□□□□ 0.97
MRPL55-231ENST00000492170 EIF4A2Q14240 407 aaKnown RBP21.08■□□□□ 0.97
MRPL55-231ENST00000492170 PIGBQ92521 554 aa21.08■□□□□ 0.97
MRPL55-231ENST00000492170 PANK3Q9H999 370 aa21.08■□□□□ 0.97
MRPL55-231ENST00000492170 PLEKHG2Q9H7P9 1386 aa21.07■□□□□ 0.96
MRPL55-231ENST00000492170 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 MSL1Q68DK7 614 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 AK7Q96M32 723 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 TMOD3Q9NYL9 352 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 CHD4Q14839 1912 aa21.06■□□□□ 0.96
MRPL55-231ENST00000492170 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
MRPL55-231ENST00000492170 PHKG2P15735 406 aa21.05■□□□□ 0.96
MRPL55-231ENST00000492170 ZNF784Q8NCA9 323 aaPredicted RBP21.05■□□□□ 0.96
MRPL55-231ENST00000492170 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
MRPL55-231ENST00000492170 NLGN2Q8NFZ4 835 aa21.04■□□□□ 0.96
MRPL55-231ENST00000492170 LOC102724428A0A0B4J2F2 783 aa21.03■□□□□ 0.96
MRPL55-231ENST00000492170 SIK1P57059 783 aa21.03■□□□□ 0.96
MRPL55-231ENST00000492170 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
MRPL55-231ENST00000492170 GOLGB1Q14789 3259 aaKnown RBP21.02■□□□□ 0.96
MRPL55-231ENST00000492170 MORC1Q86VD1 984 aa21■□□□□ 0.95
MRPL55-231ENST00000492170 PHF14O94880 888 aa20.99■□□□□ 0.95
MRPL55-231ENST00000492170 ASAP1Q9ULH1 1129 aa20.99■□□□□ 0.95
MRPL55-231ENST00000492170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.98■□□□□ 0.95
MRPL55-231ENST00000492170 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
MRPL55-231ENST00000492170 SSFA2P28290 1259 aa20.98■□□□□ 0.95
MRPL55-231ENST00000492170 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
MRPL55-231ENST00000492170 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
MRPL55-231ENST00000492170 UBR3Q6ZT12 1888 aa20.97■□□□□ 0.95
MRPL55-231ENST00000492170 PLEKHO1Q53GL0 409 aaPredicted RBP20.97■□□□□ 0.95
MRPL55-231ENST00000492170 AMIGO3Q86WK7 504 aa20.97■□□□□ 0.95
MRPL55-231ENST00000492170 GRIN3BO60391 1043 aa20.96■□□□□ 0.95
MRPL55-231ENST00000492170 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
MRPL55-231ENST00000492170 ATG3Q9NT62 314 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms