RNA–Protein interactions for RNA: ENST00000492146.1

SFMBT1-207, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 3

Gene SFMBT1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-207ENST00000492146 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
SFMBT1-207ENST00000492146 U2AF1L5P0DN76 240 aaPredicted RBP12.58□□□□□ -0.4
SFMBT1-207ENST00000492146 U2AF1Q01081 240 aaKnown RBP eCLIP12.58□□□□□ -0.4
SFMBT1-207ENST00000492146 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
SFMBT1-207ENST00000492146 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 FBLN1P23142 703 aa12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 EYA1Q99502 592 aa12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
SFMBT1-207ENST00000492146 KDRP35968 1356 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 IL2RBP14784 551 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 RBM6P78332 1123 aaKnown RBP12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 MIER1Q8N108 512 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 GJD4Q96KN9 370 aaPredicted RBP12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 SPG7Q9UQ90 795 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 MAPK8IP3Q9UPT6 1336 aa12.56□□□□□ -0.4
SFMBT1-207ENST00000492146 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 PLEKHO1Q53GL0 409 aaPredicted RBP12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
SFMBT1-207ENST00000492146 ATRNO75882 1429 aa12.54□□□□□ -0.4
SFMBT1-207ENST00000492146 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
SFMBT1-207ENST00000492146 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
SFMBT1-207ENST00000492146 RXRBP28702 533 aa12.54□□□□□ -0.4
SFMBT1-207ENST00000492146 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
SFMBT1-207ENST00000492146 EXOC5O00471 708 aa12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 NRAPQ86VF7 1730 aa12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
SFMBT1-207ENST00000492146 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
SFMBT1-207ENST00000492146 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.41
SFMBT1-207ENST00000492146 DDB1Q16531 1140 aa12.51□□□□□ -0.41
SFMBT1-207ENST00000492146 C1orf141Q5JVX7 400 aa12.51□□□□□ -0.41
SFMBT1-207ENST00000492146 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
SFMBT1-207ENST00000492146 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
SFMBT1-207ENST00000492146 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
SFMBT1-207ENST00000492146 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
SFMBT1-207ENST00000492146 FAM9BQ8IZU0 186 aa12.5□□□□□ -0.41
SFMBT1-207ENST00000492146 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
SFMBT1-207ENST00000492146 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
SFMBT1-207ENST00000492146 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
SFMBT1-207ENST00000492146 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 PDE3BQ13370 1112 aa12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 RBM42Q9BTD8 480 aaKnown RBP12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
SFMBT1-207ENST00000492146 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
SFMBT1-207ENST00000492146 HMOX1P09601 288 aa12.48□□□□□ -0.41
SFMBT1-207ENST00000492146 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
SFMBT1-207ENST00000492146 A0A0G2JS52 829 aa12.47□□□□□ -0.41
SFMBT1-207ENST00000492146 MYT1Q01538 1121 aa12.47□□□□□ -0.41
SFMBT1-207ENST00000492146 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
SFMBT1-207ENST00000492146 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
SFMBT1-207ENST00000492146 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
SFMBT1-207ENST00000492146 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
SFMBT1-207ENST00000492146 PLEKHF1Q96S99 279 aa12.46□□□□□ -0.41
SFMBT1-207ENST00000492146 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
SFMBT1-207ENST00000492146 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
SFMBT1-207ENST00000492146 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
SFMBT1-207ENST00000492146 TNS2Q63HR2 1409 aa12.45□□□□□ -0.42
SFMBT1-207ENST00000492146 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 BCL9O00512 1426 aa12.44□□□□□ -0.42
SFMBT1-207ENST00000492146 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 RIPK4P57078 832 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 KRT27Q7Z3Y8 459 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
SFMBT1-207ENST00000492146 PHKG2P15735 406 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 RGPD2P0DJD1 1756 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 GLI3P10071 1580 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
SFMBT1-207ENST00000492146 WNK3Q9BYP7 1800 aa12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
SFMBT1-207ENST00000492146 MEGF6O75095 1541 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms