RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
TOM1-215ENST00000491987 TXNRD1Q16881 649 aa20.64■□□□□ 0.89
TOM1-215ENST00000491987 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
TOM1-215ENST00000491987 ANO8Q9HCE9 1232 aaPredicted RBP20.64■□□□□ 0.89
TOM1-215ENST00000491987 BTAF1O14981 1849 aa20.64■□□□□ 0.89
TOM1-215ENST00000491987 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
TOM1-215ENST00000491987 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
TOM1-215ENST00000491987 POLKQ9UBT6 870 aa20.62■□□□□ 0.89
TOM1-215ENST00000491987 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
TOM1-215ENST00000491987 WASHC2AQ641Q2 1341 aa20.61■□□□□ 0.89
TOM1-215ENST00000491987 KIF7Q2M1P5 1343 aa20.6■□□□□ 0.89
TOM1-215ENST00000491987 NSD2O96028 1365 aa20.59■□□□□ 0.89
TOM1-215ENST00000491987 SYTL4Q96C24 671 aaPredicted RBP20.59■□□□□ 0.89
TOM1-215ENST00000491987 PRIM1P49642 420 aaKnown RBP20.58■□□□□ 0.89
TOM1-215ENST00000491987 NCAPD2Q15021 1401 aa20.58■□□□□ 0.88
TOM1-215ENST00000491987 STK32BQ9NY57 414 aa20.57■□□□□ 0.88
TOM1-215ENST00000491987 EYA1Q99502 592 aa20.56■□□□□ 0.88
TOM1-215ENST00000491987 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
TOM1-215ENST00000491987 PCDH11XQ9BZA7 1347 aa20.55■□□□□ 0.88
TOM1-215ENST00000491987 PCDH11YQ9BZA8 1340 aa20.55■□□□□ 0.88
TOM1-215ENST00000491987 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
TOM1-215ENST00000491987 MORC1Q86VD1 984 aa20.55■□□□□ 0.88
TOM1-215ENST00000491987 PAPPAQ13219 1627 aa20.55■□□□□ 0.88
TOM1-215ENST00000491987 KAT6BQ8WYB5 2073 aa20.54■□□□□ 0.88
TOM1-215ENST00000491987 PKD1L3Q7Z443 1732 aa20.54■□□□□ 0.88
TOM1-215ENST00000491987 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
TOM1-215ENST00000491987 SLC15A2Q16348 729 aa20.54■□□□□ 0.88
TOM1-215ENST00000491987 PDGFDQ9GZP0 370 aaPredicted RBP20.53■□□□□ 0.88
TOM1-215ENST00000491987 SPON1Q9HCB6 807 aa20.52■□□□□ 0.88
TOM1-215ENST00000491987 LRRC4BQ9NT99 713 aa20.52■□□□□ 0.88
TOM1-215ENST00000491987 CYP27B1O15528 508 aa20.51■□□□□ 0.87
TOM1-215ENST00000491987 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
TOM1-215ENST00000491987 SLC27A3Q5K4L6 730 aa20.49■□□□□ 0.87
TOM1-215ENST00000491987 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
TOM1-215ENST00000491987 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
TOM1-215ENST00000491987 LY75O60449 1722 aa20.48■□□□□ 0.87
TOM1-215ENST00000491987 ZBTB7AO95365 584 aa20.48■□□□□ 0.87
TOM1-215ENST00000491987 ZNF827Q17R98 1081 aa20.48■□□□□ 0.87
TOM1-215ENST00000491987 KCNQ4P56696 695 aa20.47■□□□□ 0.87
TOM1-215ENST00000491987 PPP1R1BQ9UD71 204 aaPredicted RBP20.47■□□□□ 0.87
TOM1-215ENST00000491987 IGSF1Q8N6C5 1336 aa20.47■□□□□ 0.87
TOM1-215ENST00000491987 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
TOM1-215ENST00000491987 PER1O15534 1290 aaPredicted RBP20.44■□□□□ 0.86
TOM1-215ENST00000491987 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
TOM1-215ENST00000491987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
TOM1-215ENST00000491987 CCNL1Q9UK58 526 aaPredicted RBP20.44■□□□□ 0.86
TOM1-215ENST00000491987 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
TOM1-215ENST00000491987 ITGB4P16144 1822 aa20.42■□□□□ 0.86
TOM1-215ENST00000491987 PHKG2P15735 406 aa20.42■□□□□ 0.86
TOM1-215ENST00000491987 NKX1-1Q15270 411 aaPredicted RBP20.42■□□□□ 0.86
TOM1-215ENST00000491987 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
TOM1-215ENST00000491987 PALLDQ8WX93 1383 aa20.42■□□□□ 0.86
TOM1-215ENST00000491987 IFNL2Q8IZJ0 200 aa20.41■□□□□ 0.86
TOM1-215ENST00000491987 MTFR1LQ9H019 292 aa20.41■□□□□ 0.86
TOM1-215ENST00000491987 PTGER2P43116 358 aa20.4■□□□□ 0.86
TOM1-215ENST00000491987 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
TOM1-215ENST00000491987 AEBP1Q8IUX7 1158 aa20.4■□□□□ 0.86
TOM1-215ENST00000491987 PLEKHG2Q9H7P9 1386 aa20.4■□□□□ 0.86
TOM1-215ENST00000491987 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.86
TOM1-215ENST00000491987 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.86
TOM1-215ENST00000491987 PIGBQ92521 554 aa20.39■□□□□ 0.85
TOM1-215ENST00000491987 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
TOM1-215ENST00000491987 PNPLA7Q6ZV29 1317 aa20.38■□□□□ 0.85
TOM1-215ENST00000491987 IL13P35225 146 aa20.38■□□□□ 0.85
TOM1-215ENST00000491987 MTHFSP49914 203 aa20.38■□□□□ 0.85
TOM1-215ENST00000491987 C5P01031 1676 aa20.38■□□□□ 0.85
TOM1-215ENST00000491987 SULT6B1Q6IMI4 303 aa20.37■□□□□ 0.85
TOM1-215ENST00000491987 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
TOM1-215ENST00000491987 SMARCC1Q92922 1105 aaPredicted RBP20.36■□□□□ 0.85
TOM1-215ENST00000491987 TMOD3Q9NYL9 352 aa20.36■□□□□ 0.85
TOM1-215ENST00000491987 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
TOM1-215ENST00000491987 AMOTQ4VCS5 1084 aa20.34■□□□□ 0.85
TOM1-215ENST00000491987 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
TOM1-215ENST00000491987 SGIP1Q9BQI5 828 aa20.34■□□□□ 0.85
TOM1-215ENST00000491987 KDRP35968 1356 aa20.34■□□□□ 0.85
TOM1-215ENST00000491987 HSP90AB1P08238 724 aaKnown RBP20.32■□□□□ 0.84
TOM1-215ENST00000491987 SLC16A10Q8TF71 515 aa20.32■□□□□ 0.84
TOM1-215ENST00000491987 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
TOM1-215ENST00000491987 KDM6AO15550 1401 aaPredicted RBP20.31■□□□□ 0.84
TOM1-215ENST00000491987 ASAP1Q9ULH1 1129 aa20.31■□□□□ 0.84
TOM1-215ENST00000491987 MSH5O43196 834 aa20.3■□□□□ 0.84
TOM1-215ENST00000491987 C1orf141Q5JVX7 400 aa20.3■□□□□ 0.84
TOM1-215ENST00000491987 DCAF5Q96JK2 942 aa20.3■□□□□ 0.84
TOM1-215ENST00000491987 ARXQ96QS3 562 aa20.3■□□□□ 0.84
TOM1-215ENST00000491987 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
TOM1-215ENST00000491987 LOC102724428A0A0B4J2F2 783 aa20.29■□□□□ 0.84
TOM1-215ENST00000491987 ERVV-2B6SEH9 535 aa20.29■□□□□ 0.84
TOM1-215ENST00000491987 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
TOM1-215ENST00000491987 HMOX1P09601 288 aa20.29■□□□□ 0.84
TOM1-215ENST00000491987 SIK1P57059 783 aa20.29■□□□□ 0.84
TOM1-215ENST00000491987 COL23A1Q86Y22 540 aaPredicted RBP20.29■□□□□ 0.84
TOM1-215ENST00000491987 FHDC1Q9C0D6 1143 aaPredicted RBP20.29■□□□□ 0.84
TOM1-215ENST00000491987 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
TOM1-215ENST00000491987 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
TOM1-215ENST00000491987 HMGB2P26583 209 aaKnown RBP20.27■□□□□ 0.84
TOM1-215ENST00000491987 AK7Q96M32 723 aa20.27■□□□□ 0.84
TOM1-215ENST00000491987 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.83
TOM1-215ENST00000491987 POLD1P28340 1107 aa20.26■□□□□ 0.83
TOM1-215ENST00000491987 CABP4P57796 275 aa20.26■□□□□ 0.83
TOM1-215ENST00000491987 LINC00116Q8NCU8 138 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms