RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SLC12A5	Q9H2X9	1139 aa		27.4	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	TERF2IP	Q9NYB0	399 aa		27.4	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	MON2	Q7Z3U7	1717 aa		27.4	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	LTN1	O94822	1766 aa		27.4	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	CD2AP	Q9Y5K6	639 aa		27.39	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	ATP10D	Q9P241	1426 aa		27.39	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	USP54	Q70EL1	1684 aa		27.37	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	EDC4	Q6P2E9	1401 aa	Known RBP	27.37	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	CD163L1	Q9NR16	1453 aa		27.37	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	HSPA6	P17066	643 aa		27.36	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	USP47	Q96K76	1375 aa		27.35	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	MSL1	Q68DK7	614 aa		27.35	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	FLAD1	Q8NFF5	587 aa		27.35	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	NSD2	O96028	1365 aa		27.34	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	SIN3A	Q96ST3	1273 aa		27.33	■■□□□ 1.97
CDK5RAP2-218	ENST00000491334	AMPH	P49418	695 aa		27.32	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	NEUROD1	Q13562	356 aa		27.32	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	TUBGCP6	Q96RT7	1819 aa		27.32	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	LY75	O60449	1722 aa		27.3	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	HOXC9	P31274	260 aa		27.3	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	ZNF526	Q8TF50	670 aa	Predicted RBP	27.29	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	COG3	Q96JB2	828 aa		27.29	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	PUS7	Q96PZ0	661 aa	Known RBP	27.29	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	MAP3K19	Q56UN5	1328 aa		27.28	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	CARD11	Q9BXL7	1154 aa		27.28	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	CGNL1	Q0VF96	1302 aa		27.27	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334	FAM208A	Q9UK61	1670 aa	Known RBP	27.27	■■□□□ 1.96
CDK5RAP2-218	ENST00000491334		A0A1W2PP64	1363 aa		27.26	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	DOT1L	Q8TEK3	1739 aa		27.24	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	ADCY9	O60503	1353 aa		27.24	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	RAPGEF4	Q8WZA2	1011 aa		27.23	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	FBLN1	P23142	703 aa		27.21	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	NBPF6	Q5VWK0	638 aa		27.21	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	NBPF4	Q96M43	638 aa		27.21	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	MEGF6	O75095	1541 aa		27.21	■■□□□ 1.95
CDK5RAP2-218	ENST00000491334	TAT	P17735	454 aa	Predicted RBP	27.19	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	IGSF1	Q8N6C5	1336 aa		27.18	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	MPRIP	Q6WCQ1	1025 aa		27.18	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	AK7	Q96M32	723 aa		27.18	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	SMARCC1	Q92922	1105 aa	Predicted RBP	27.17	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	PALLD	Q8WX93	1383 aa		27.17	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	USHBP1	Q8N6Y0	703 aa		27.16	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	PCDH11X	Q9BZA7	1347 aa		27.15	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	PCDH11Y	Q9BZA8	1340 aa		27.15	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	KIF3C	O14782	793 aa		27.14	■■□□□ 1.94
CDK5RAP2-218	ENST00000491334	RTL1	A6NKG5	1358 aa		27.13	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	APLP1	P51693	650 aa		27.13	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	RRS1	Q15050	365 aa	Known RBP	27.13	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	WWC3	Q9ULE0	1092 aa		27.13	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	SLC24A1	O60721	1099 aa		27.12	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	C5	P01031	1676 aa		27.11	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	SMG6	Q86US8	1419 aa	Known RBP	27.11	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	27.11	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	PHF14	O94880	888 aa		27.11	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	RGPD2	P0DJD1	1756 aa		27.1	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	NSD3	Q9BZ95	1437 aa		27.1	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	SSFA2	P28290	1259 aa		27.08	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	AMIGO3	Q86WK7	504 aa		27.08	■■□□□ 1.93
CDK5RAP2-218	ENST00000491334	CYP27B1	O15528	508 aa		27.06	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	TOMM70	O94826	608 aa		27.06	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	FYB1	O15117	783 aa		27.05	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	SMIM5	Q71RC9	77 aa		27.05	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	PIGB	Q92521	554 aa		27.05	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	HSP90AB2P	Q58FF8	381 aa		27.04	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	DNAJC5G	Q8N7S2	189 aa		27.04	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	GGNBP2	Q9H3C7	697 aa		27.04	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	TAF1L	Q8IZX4	1826 aa		27.04	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	INSR	P06213	1382 aa		27.03	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	C4B	P0C0L5	1744 aa		27.03	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	TESK2	Q96S53	571 aa		27.03	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	LOC102724428	A0A0B4J2F2	783 aa		27.02	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	SIK1	P57059	783 aa		27.02	■■□□□ 1.92
CDK5RAP2-218	ENST00000491334	ST20-MTHFS	A0A0A6YYL1	179 aa		27	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	TGFB2	P61812	414 aa		26.99	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	NKX1-1	Q15270	411 aa	Predicted RBP	26.99	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	LINC00116	Q8NCU8	138 aa		26.99	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	GNPAT	O15228	680 aa		26.98	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	SPG7	Q9UQ90	795 aa		26.98	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	MMP10	P09238	476 aa		26.97	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	BCS1L	Q9Y276	419 aa		26.97	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	FLT4	P35916	1363 aa		26.97	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	KIF24	Q5T7B8	1368 aa		26.97	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	ARHGAP27	Q6ZUM4	889 aa		26.96	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	UBR3	Q6ZT12	1888 aa		26.96	■■□□□ 1.91
CDK5RAP2-218	ENST00000491334	ATP6V1A	P38606	617 aa		26.95	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	TMOD3	Q9NYL9	352 aa		26.95	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	NLGN1	Q8N2Q7	840 aa		26.94	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334		A0A0G2JLW4	131 aa		26.93	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	ITPK1	Q13572	414 aa		26.92	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	TRAPPC3L	Q5T215	181 aa		26.92	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	ASAP1	Q9ULH1	1129 aa		26.92	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	TOGARAM1	Q9Y4F4	1720 aa		26.92	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	ITGB4	P16144	1822 aa		26.92	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	TMF1	P82094	1093 aa		26.91	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	C16orf71	Q8IYS4	520 aa	Predicted RBP	26.91	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	NMRK2	Q9NPI5	230 aa		26.91	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	TONSL	Q96HA7	1378 aa		26.91	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	CIC	Q96RK0	1608 aa	Predicted RBP	26.9	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	RBM46	Q8TBY0	533 aa	Known RBP	26.9	■■□□□ 1.9
CDK5RAP2-218	ENST00000491334	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	26.9	■■□□□ 1.9

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms