RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
PTPRC-212ENST00000491302 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
PTPRC-212ENST00000491302 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
PTPRC-212ENST00000491302 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
PTPRC-212ENST00000491302 PCDHGA11Q9Y5H2 935 aa13.35□□□□□ -0.27
PTPRC-212ENST00000491302 INTS6LQ5JSJ4 861 aaKnown RBP13.34□□□□□ -0.27
PTPRC-212ENST00000491302 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
PTPRC-212ENST00000491302 KIAA1024Q9UPX6 916 aa13.34□□□□□ -0.27
PTPRC-212ENST00000491302 DKK1O94907 266 aa13.33□□□□□ -0.28
PTPRC-212ENST00000491302 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
PTPRC-212ENST00000491302 RAB15P59190 212 aa13.33□□□□□ -0.28
PTPRC-212ENST00000491302 NPM2Q86SE8 214 aaKnown RBP13.33□□□□□ -0.28
PTPRC-212ENST00000491302 CDK15Q96Q40 435 aa13.33□□□□□ -0.28
PTPRC-212ENST00000491302 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
PTPRC-212ENST00000491302 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
PTPRC-212ENST00000491302 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
PTPRC-212ENST00000491302 SND1Q7KZF4 910 aaKnown RBP eCLIP13.32□□□□□ -0.284e-7■■■■□ 20.3
PTPRC-212ENST00000491302 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
PTPRC-212ENST00000491302 MPNDQ8N594 471 aa13.32□□□□□ -0.28
PTPRC-212ENST00000491302 ARID5BQ14865 1188 aa13.31□□□□□ -0.28
PTPRC-212ENST00000491302 PHLDB3Q6NSJ2 640 aa13.31□□□□□ -0.28
PTPRC-212ENST00000491302 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
PTPRC-212ENST00000491302 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
PTPRC-212ENST00000491302 C1orf216Q8TAB5 229 aa13.29□□□□□ -0.28
PTPRC-212ENST00000491302 M0R2N6 131 aa13.28□□□□□ -0.28
PTPRC-212ENST00000491302 CCDC27Q2M243 656 aa13.28□□□□□ -0.28
PTPRC-212ENST00000491302 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
PTPRC-212ENST00000491302 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
PTPRC-212ENST00000491302 SFI1A8K8P3 1242 aa13.27□□□□□ -0.29
PTPRC-212ENST00000491302 ERVK-9P63128 1117 aa13.27□□□□□ -0.29
PTPRC-212ENST00000491302 RGS22Q8NE09 1264 aa13.26□□□□□ -0.29
PTPRC-212ENST00000491302 FSHRP23945 695 aa13.25□□□□□ -0.29
PTPRC-212ENST00000491302 LIAT1Q6ZQX7 453 aa13.25□□□□□ -0.29
PTPRC-212ENST00000491302 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
PTPRC-212ENST00000491302 GRM5P41594 1212 aa13.24□□□□□ -0.29
PTPRC-212ENST00000491302 NR5A1Q13285 461 aa13.24□□□□□ -0.29
PTPRC-212ENST00000491302 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
PTPRC-212ENST00000491302 PRMT3O60678 531 aa13.23□□□□□ -0.29
PTPRC-212ENST00000491302 CXXC1Q9P0U4 656 aaPredicted RBP13.23□□□□□ -0.29
PTPRC-212ENST00000491302 WNT7AO00755 349 aa13.22□□□□□ -0.29
PTPRC-212ENST00000491302 SIAH2O43255 324 aa13.22□□□□□ -0.29
PTPRC-212ENST00000491302 ADH1CP00326 375 aa13.22□□□□□ -0.29
PTPRC-212ENST00000491302 SCTRP47872 440 aa13.22□□□□□ -0.29
PTPRC-212ENST00000491302 CCDC116Q8IYX3 515 aa13.22□□□□□ -0.29
PTPRC-212ENST00000491302 BACH1O14867 736 aa13.21□□□□□ -0.29
PTPRC-212ENST00000491302 SLC19A1P41440 591 aa13.21□□□□□ -0.29
PTPRC-212ENST00000491302 OCLNQ16625 522 aa13.21□□□□□ -0.29
PTPRC-212ENST00000491302 TLL2Q9Y6L7 1015 aa13.21□□□□□ -0.29
PTPRC-212ENST00000491302 MYT1Q01538 1121 aa13.2□□□□□ -0.3
PTPRC-212ENST00000491302 TAS1R3Q7RTX0 852 aa13.2□□□□□ -0.3
PTPRC-212ENST00000491302 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
PTPRC-212ENST00000491302 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPRC-212ENST00000491302 OSBPL3Q9H4L5 887 aa13.19□□□□□ -0.3
PTPRC-212ENST00000491302 CYLDQ9NQC7 956 aa13.19□□□□□ -0.3
PTPRC-212ENST00000491302 WASLO00401 505 aaPredicted RBP13.18□□□□□ -0.3
PTPRC-212ENST00000491302 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
PTPRC-212ENST00000491302 TSEN2Q8NCE0 465 aaKnown RBP13.18□□□□□ -0.3
PTPRC-212ENST00000491302 TMPRSS4Q9NRS4 437 aa13.18□□□□□ -0.3
PTPRC-212ENST00000491302 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
PTPRC-212ENST00000491302 PPP1R26Q5T8A7 1209 aaPredicted RBP13.17□□□□□ -0.3
PTPRC-212ENST00000491302 PGPEP1Q9NXJ5 209 aa13.17□□□□□ -0.3
PTPRC-212ENST00000491302 WEE1P30291 646 aa13.16□□□□□ -0.3
PTPRC-212ENST00000491302 GDF10P55107 478 aa13.16□□□□□ -0.3
PTPRC-212ENST00000491302 ZNF784Q8NCA9 323 aaPredicted RBP13.16□□□□□ -0.3
PTPRC-212ENST00000491302 MRGPRX2Q96LB1 330 aa13.16□□□□□ -0.3
PTPRC-212ENST00000491302 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
PTPRC-212ENST00000491302 SOWAHDA6NJG2 315 aa13.15□□□□□ -0.3
PTPRC-212ENST00000491302 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
PTPRC-212ENST00000491302 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
PTPRC-212ENST00000491302 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
PTPRC-212ENST00000491302 EGFL7Q9UHF1 273 aa13.15□□□□□ -0.3
PTPRC-212ENST00000491302 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
PTPRC-212ENST00000491302 GNRH1P01148 92 aa13.14□□□□□ -0.31
PTPRC-212ENST00000491302 SERPINB4P48594 390 aa13.14□□□□□ -0.31
PTPRC-212ENST00000491302 SPRYD7Q5W111 196 aa13.14□□□□□ -0.31
PTPRC-212ENST00000491302 INHAP05111 366 aa13.13□□□□□ -0.31
PTPRC-212ENST00000491302 IGFBP4P22692 258 aa13.13□□□□□ -0.31
PTPRC-212ENST00000491302 SCNN1DP51172 638 aa13.13□□□□□ -0.31
PTPRC-212ENST00000491302 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
PTPRC-212ENST00000491302 LILRA1O75019 489 aa13.12□□□□□ -0.31
PTPRC-212ENST00000491302 FOXO3O43524 673 aa13.1□□□□□ -0.31
PTPRC-212ENST00000491302 ZNF598Q86UK7 904 aaKnown RBP13.1□□□□□ -0.31
PTPRC-212ENST00000491302 COL26A1Q96A83 441 aa13.1□□□□□ -0.31
PTPRC-212ENST00000491302 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
PTPRC-212ENST00000491302 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
PTPRC-212ENST00000491302 LGR5O75473 907 aa13.09□□□□□ -0.31
PTPRC-212ENST00000491302 ERCC3P19447 782 aa13.09□□□□□ -0.31
PTPRC-212ENST00000491302 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
PTPRC-212ENST00000491302 ETNK1Q9HBU6 452 aa13.09□□□□□ -0.31
PTPRC-212ENST00000491302 WASF2Q9Y6W5 498 aa13.09□□□□□ -0.31
PTPRC-212ENST00000491302 ABL1P00519 1130 aa13.08□□□□□ -0.32
PTPRC-212ENST00000491302 NR3C2P08235 984 aa13.08□□□□□ -0.32
PTPRC-212ENST00000491302 SCNN1AP37088 669 aa13.08□□□□□ -0.32
PTPRC-212ENST00000491302 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
PTPRC-212ENST00000491302 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
PTPRC-212ENST00000491302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPRC-212ENST00000491302 PLA2G2EQ9NZK7 142 aa13.08□□□□□ -0.32
PTPRC-212ENST00000491302 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
PTPRC-212ENST00000491302 ALDH1A1P00352 501 aa13.07□□□□□ -0.32
PTPRC-212ENST00000491302 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms