RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SYTL4Q96C24 671 aaPredicted RBP19.44■□□□□ 0.7
CTDSP1-210ENST00000491064 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
CTDSP1-210ENST00000491064 LTV1Q96GA3 475 aaPredicted RBP19.43■□□□□ 0.7
CTDSP1-210ENST00000491064 A0A1W2PP64 1363 aa19.43■□□□□ 0.7
CTDSP1-210ENST00000491064 RGPD2P0DJD1 1756 aa19.42■□□□□ 0.7
CTDSP1-210ENST00000491064 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■□□□□ 10.2
CTDSP1-210ENST00000491064 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
CTDSP1-210ENST00000491064 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
CTDSP1-210ENST00000491064 GRIN3BO60391 1043 aa19.4■□□□□ 0.7
CTDSP1-210ENST00000491064 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
CTDSP1-210ENST00000491064 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
CTDSP1-210ENST00000491064 MEGF6O75095 1541 aa19.38■□□□□ 0.69
CTDSP1-210ENST00000491064 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
CTDSP1-210ENST00000491064 CARD11Q9BXL7 1154 aa19.38■□□□□ 0.69
CTDSP1-210ENST00000491064 MAP3K19Q56UN5 1328 aa19.37■□□□□ 0.69
CTDSP1-210ENST00000491064 ZCRB1Q8TBF4 217 aaKnown RBP19.37■□□□□ 0.69
CTDSP1-210ENST00000491064 MSH5O43196 834 aa19.36■□□□□ 0.69
CTDSP1-210ENST00000491064 HOXC9P31274 260 aa19.36■□□□□ 0.69
CTDSP1-210ENST00000491064 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
CTDSP1-210ENST00000491064 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
CTDSP1-210ENST00000491064 C5P01031 1676 aa19.35■□□□□ 0.69
CTDSP1-210ENST00000491064 USP47Q96K76 1375 aa19.34■□□□□ 0.69
CTDSP1-210ENST00000491064 FBLN1P23142 703 aa19.34■□□□□ 0.69
CTDSP1-210ENST00000491064 MSL1Q68DK7 614 aa19.34■□□□□ 0.69
CTDSP1-210ENST00000491064 TAF1LQ8IZX4 1826 aa19.33■□□□□ 0.69
CTDSP1-210ENST00000491064 AMPHP49418 695 aa19.33■□□□□ 0.68
CTDSP1-210ENST00000491064 COG3Q96JB2 828 aa19.33■□□□□ 0.68
CTDSP1-210ENST00000491064 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
CTDSP1-210ENST00000491064 RTL1A6NKG5 1358 aa19.3■□□□□ 0.68
CTDSP1-210ENST00000491064 CGNL1Q0VF96 1302 aa19.29■□□□□ 0.68
CTDSP1-210ENST00000491064 NBPF6Q5VWK0 638 aa19.29■□□□□ 0.68
CTDSP1-210ENST00000491064 NBPF4Q96M43 638 aa19.29■□□□□ 0.68
CTDSP1-210ENST00000491064 ADCY9O60503 1353 aa19.29■□□□□ 0.68
CTDSP1-210ENST00000491064 USHBP1Q8N6Y0 703 aa19.28■□□□□ 0.68
CTDSP1-210ENST00000491064 GPBP1L1Q9HC44 474 aaPredicted RBP19.28■□□□□ 0.68
CTDSP1-210ENST00000491064 FLAD1Q8NFF5 587 aa19.27■□□□□ 0.68
CTDSP1-210ENST00000491064 RRS1Q15050 365 aaKnown RBP19.26■□□□□ 0.67
CTDSP1-210ENST00000491064 RAPGEF4Q8WZA2 1011 aa19.26■□□□□ 0.67
CTDSP1-210ENST00000491064 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
CTDSP1-210ENST00000491064 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
CTDSP1-210ENST00000491064 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
CTDSP1-210ENST00000491064 TESK2Q96S53 571 aa19.25■□□□□ 0.67
CTDSP1-210ENST00000491064 ITGB4P16144 1822 aa19.25■□□□□ 0.67
CTDSP1-210ENST00000491064 SMG6Q86US8 1419 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-210ENST00000491064 UBR3Q6ZT12 1888 aa19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 HSPA6P17066 643 aa19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 TATP17735 454 aaPredicted RBP19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 HMGB2P26583 209 aaKnown RBP19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 PCDH11XQ9BZA7 1347 aa19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 PCDH11YQ9BZA8 1340 aa19.24■□□□□ 0.67
CTDSP1-210ENST00000491064 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
CTDSP1-210ENST00000491064 ZNF526Q8TF50 670 aaPredicted RBP19.22■□□□□ 0.67
CTDSP1-210ENST00000491064 AMIGO3Q86WK7 504 aa19.21■□□□□ 0.67
CTDSP1-210ENST00000491064 IGSF1Q8N6C5 1336 aa19.21■□□□□ 0.67
CTDSP1-210ENST00000491064 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
CTDSP1-210ENST00000491064 FYB1O15117 783 aa19.2■□□□□ 0.66
CTDSP1-210ENST00000491064 CYP27B1O15528 508 aa19.2■□□□□ 0.66
CTDSP1-210ENST00000491064 AK7Q96M32 723 aa19.2■□□□□ 0.66
CTDSP1-210ENST00000491064 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
CTDSP1-210ENST00000491064 INSRP06213 1382 aa19.19■□□□□ 0.66
CTDSP1-210ENST00000491064 HSP90AB2PQ58FF8 381 aa19.19■□□□□ 0.66
CTDSP1-210ENST00000491064 PKD1L3Q7Z443 1732 aa19.19■□□□□ 0.66
CTDSP1-210ENST00000491064 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-210ENST00000491064 SMARCC1Q92922 1105 aaPredicted RBP19.18■□□□□ 0.66
CTDSP1-210ENST00000491064 WWC3Q9ULE0 1092 aa19.18■□□□□ 0.66
CTDSP1-210ENST00000491064 TONSLQ96HA7 1378 aa19.18■□□□□ 0.66
CTDSP1-210ENST00000491064 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 KIF20BQ96Q89 1820 aa19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 PHF14O94880 888 aa19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 FLT4P35916 1363 aa19.17■□□□□ 0.66
CTDSP1-210ENST00000491064 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
CTDSP1-210ENST00000491064 PIGBQ92521 554 aa19.15■□□□□ 0.66
CTDSP1-210ENST00000491064 KIF24Q5T7B8 1368 aa19.15■□□□□ 0.66
CTDSP1-210ENST00000491064 CICQ96RK0 1608 aaPredicted RBP19.14■□□□□ 0.66
CTDSP1-210ENST00000491064 KIF3CO14782 793 aa19.14■□□□□ 0.65
CTDSP1-210ENST00000491064 SSFA2P28290 1259 aa19.14■□□□□ 0.65
CTDSP1-210ENST00000491064 LINC00116Q8NCU8 138 aa19.13■□□□□ 0.65
CTDSP1-210ENST00000491064 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
CTDSP1-210ENST00000491064 NCAPD2Q15021 1401 aa19.12■□□□□ 0.65
CTDSP1-210ENST00000491064 NKX1-1Q15270 411 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-210ENST00000491064 LOC102724428A0A0B4J2F2 783 aa19.11■□□□□ 0.65
CTDSP1-210ENST00000491064 SIK1P57059 783 aa19.11■□□□□ 0.65
CTDSP1-210ENST00000491064 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
CTDSP1-210ENST00000491064 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
CTDSP1-210ENST00000491064 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-210ENST00000491064 TMF1P82094 1093 aa19.08■□□□□ 0.64
CTDSP1-210ENST00000491064 ITPK1Q13572 414 aa19.08■□□□□ 0.64
CTDSP1-210ENST00000491064 PXDNLA1KZ92 1463 aa19.08■□□□□ 0.64
CTDSP1-210ENST00000491064 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.64
CTDSP1-210ENST00000491064 GNPATO15228 680 aa19.07■□□□□ 0.64
CTDSP1-210ENST00000491064 ASAP1Q9ULH1 1129 aa19.07■□□□□ 0.64
CTDSP1-210ENST00000491064 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
CTDSP1-210ENST00000491064 MMP10P09238 476 aa19.06■□□□□ 0.64
CTDSP1-210ENST00000491064 APLP1P51693 650 aa19.06■□□□□ 0.64
CTDSP1-210ENST00000491064 TMOD3Q9NYL9 352 aa19.06■□□□□ 0.64
CTDSP1-210ENST00000491064 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
CTDSP1-210ENST00000491064 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.04■□□□□ 0.64
CTDSP1-210ENST00000491064 TOMM70O94826 608 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms