RNA–Protein interactions for RNA: ENST00000491005.5

RAB3GAP2-209, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 2

Gene RAB3GAP2, Length 897 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-209ENST00000491005 GCC1Q96CN9 775 aa9.47□□□□□ -0.89
RAB3GAP2-209ENST00000491005 ESF1Q9H501 851 aaKnown RBP9.47□□□□□ -0.89
RAB3GAP2-209ENST00000491005 ERBB3P21860 1342 aa9.47□□□□□ -0.89
RAB3GAP2-209ENST00000491005 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
RAB3GAP2-209ENST00000491005 CFAP65Q6ZU64 1925 aaKnown RBP9.46□□□□□ -0.89
RAB3GAP2-209ENST00000491005 C2orf72A6NCS6 295 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 DDX11L8A8MPP1 907 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 TMPOP42166 694 aaKnown RBP9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PNPLA6Q8IY17 1366 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PTPRMP28827 1452 aa9.46□□□□□ -0.9
RAB3GAP2-209ENST00000491005 TNNT2P45379 298 aaPredicted RBP9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 CASC1Q6TDU7 716 aa9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 API5Q9BZZ5 524 aaKnown RBP9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 AATKQ6ZMQ8 1374 aa9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 EDC4Q6P2E9 1401 aaKnown RBP9.45□□□□□ -0.9
RAB3GAP2-209ENST00000491005 RIPK4P57078 832 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 IDI1Q13907 227 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 TMEM132EQ6IEE7 984 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 RNF166Q96A37 237 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 CHMP5Q9NZZ3 219 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 CDK12Q9NYV4 1490 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
RAB3GAP2-209ENST00000491005 SIGLEC1Q9BZZ2 1709 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 FAM135BQ49AJ0 1406 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 GOLGA6L22H0YM25 854 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 IGHDP01880 384 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 SKOR2Q2VWA4 1001 aaPredicted RBP9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 GBP4Q96PP9 640 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PRAM1Q96QH2 718 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
RAB3GAP2-209ENST00000491005 SPATA31D1Q6ZQQ2 1576 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 COL3A1P02461 1466 aaPredicted RBP9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 KIF3CO14782 793 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 RIMBP2O15034 1052 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 SMC5Q8IY18 1101 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 KNDC1Q76NI1 1749 aa9.42□□□□□ -0.9
RAB3GAP2-209ENST00000491005 FYB1O15117 783 aa9.41□□□□□ -0.9
RAB3GAP2-209ENST00000491005 EXOSC9Q06265 439 aaKnown RBP9.41□□□□□ -0.9
RAB3GAP2-209ENST00000491005 COG3Q96JB2 828 aa9.41□□□□□ -0.9
RAB3GAP2-209ENST00000491005 CDK19Q9BWU1 502 aa9.41□□□□□ -0.9
RAB3GAP2-209ENST00000491005 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.9
RAB3GAP2-209ENST00000491005 SNX21Q969T3 373 aa9.4□□□□□ -0.9
RAB3GAP2-209ENST00000491005 GPHNQ9NQX3 736 aaPredicted RBP9.4□□□□□ -0.9
RAB3GAP2-209ENST00000491005 STK26Q9P289 416 aa9.4□□□□□ -0.9
RAB3GAP2-209ENST00000491005 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 TRIM27P14373 513 aa9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 ANP32BQ92688 251 aaKnown RBP9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 PTCH1Q13635 1447 aa9.39□□□□□ -0.91
RAB3GAP2-209ENST00000491005 PIK3R4Q99570 1358 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 HMMRO75330 724 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 NUCB1Q02818 461 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 ZSWIM6Q9HCJ5 1215 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 ZBTB40Q9NUA8 1239 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 NOB1Q9ULX3 412 aaKnown RBP9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 ITSN1Q15811 1721 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 NLRP1Q9C000 1473 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 TECPR2O15040 1411 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
RAB3GAP2-209ENST00000491005 PTPRCP08575 1304 aa9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 LRRC7Q96NW7 1537 aa9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 GOLGA6L3A6NEY3 463 aa9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 RBM25P49756 843 aaKnown RBP9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CHD1LQ86WJ1 897 aa9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CPSF1Q10570 1443 aaKnown RBP9.37□□□□□ -0.91
RAB3GAP2-209ENST00000491005 A2ML1A8K2U0 1454 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CD163L1Q9NR16 1453 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 WASLO00401 505 aaPredicted RBP9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 HSP90AB1P08238 724 aaKnown RBP9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 FOXK1P85037 733 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 ZNF687Q8N1G0 1237 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 RSPH6AQ9H0K4 717 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CABP1Q9NZU7 370 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CPS1P31327 1500 aa9.36□□□□□ -0.91
RAB3GAP2-209ENST00000491005 CDC45O75419 566 aa9.35□□□□□ -0.91
RAB3GAP2-209ENST00000491005 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
RAB3GAP2-209ENST00000491005 RLBP1P12271 317 aa9.35□□□□□ -0.91
RAB3GAP2-209ENST00000491005 DSG2Q14126 1118 aa9.35□□□□□ -0.91
RAB3GAP2-209ENST00000491005 SAFB2Q14151 953 aaKnown RBP eCLIP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms