RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 KIF24Q5T7B8 1368 aa22.16■■□□□ 1.14
ARHGEF39-206ENST00000490970 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
ARHGEF39-206ENST00000490970 RAPGEF4Q8WZA2 1011 aa22.13■■□□□ 1.13
ARHGEF39-206ENST00000490970 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
ARHGEF39-206ENST00000490970 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
ARHGEF39-206ENST00000490970 TATP17735 454 aaPredicted RBP22.11■■□□□ 1.13
ARHGEF39-206ENST00000490970 PRIM1P49642 420 aaKnown RBP22.11■■□□□ 1.13
ARHGEF39-206ENST00000490970 BTAF1O14981 1849 aa22.1■■□□□ 1.13
ARHGEF39-206ENST00000490970 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
ARHGEF39-206ENST00000490970 SYTL4Q96C24 671 aaPredicted RBP22.1■■□□□ 1.13
ARHGEF39-206ENST00000490970 SHANK3Q9BYB0 1731 aa22.1■■□□□ 1.13
ARHGEF39-206ENST00000490970 PDGFDQ9GZP0 370 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF39-206ENST00000490970 STK32BQ9NY57 414 aa22.09■■□□□ 1.13
ARHGEF39-206ENST00000490970 SLC15A2Q16348 729 aa22.07■■□□□ 1.12
ARHGEF39-206ENST00000490970 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
ARHGEF39-206ENST00000490970 EYA1Q99502 592 aa22.06■■□□□ 1.12
ARHGEF39-206ENST00000490970 SPON1Q9HCB6 807 aa22.06■■□□□ 1.12
ARHGEF39-206ENST00000490970 LRRC4BQ9NT99 713 aa22.05■■□□□ 1.12
ARHGEF39-206ENST00000490970 DOT1LQ8TEK3 1739 aa22.05■■□□□ 1.12
ARHGEF39-206ENST00000490970 KIF7Q2M1P5 1343 aa22.05■■□□□ 1.12
ARHGEF39-206ENST00000490970 NSD2O96028 1365 aa22.03■■□□□ 1.12
ARHGEF39-206ENST00000490970 KNSTRNQ9Y448 316 aa22.03■■□□□ 1.12
ARHGEF39-206ENST00000490970 PCDH11XQ9BZA7 1347 aa22.03■■□□□ 1.12
ARHGEF39-206ENST00000490970 PCDH11YQ9BZA8 1340 aa22.03■■□□□ 1.12
ARHGEF39-206ENST00000490970 CYP27B1O15528 508 aa22.02■■□□□ 1.12
ARHGEF39-206ENST00000490970 ZBTB7AO95365 584 aa22.02■■□□□ 1.12
ARHGEF39-206ENST00000490970 EIF4A2Q14240 407 aaKnown RBP22.02■■□□□ 1.12
ARHGEF39-206ENST00000490970 MORC1Q86VD1 984 aa22.02■■□□□ 1.12
ARHGEF39-206ENST00000490970 CASZ1Q86V15 1759 aa22.02■■□□□ 1.11
ARHGEF39-206ENST00000490970 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
ARHGEF39-206ENST00000490970 KCNQ4P56696 695 aa22.01■■□□□ 1.11
ARHGEF39-206ENST00000490970 ZNF827Q17R98 1081 aa22■■□□□ 1.11
ARHGEF39-206ENST00000490970 PPP1R1BQ9UD71 204 aaPredicted RBP22■■□□□ 1.11
ARHGEF39-206ENST00000490970 ATF5Q9Y2D1 282 aaPredicted RBP22■■□□□ 1.11
ARHGEF39-206ENST00000490970 SLC27A3Q5K4L6 730 aa21.99■■□□□ 1.11
ARHGEF39-206ENST00000490970 PAPPAQ13219 1627 aa21.98■■□□□ 1.11
ARHGEF39-206ENST00000490970 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
ARHGEF39-206ENST00000490970 AMER1Q5JTC6 1135 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF39-206ENST00000490970 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
ARHGEF39-206ENST00000490970 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
ARHGEF39-206ENST00000490970 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
ARHGEF39-206ENST00000490970 PTGER2P43116 358 aa21.94■■□□□ 1.1
ARHGEF39-206ENST00000490970 CCNL1Q9UK58 526 aaPredicted RBP21.94■■□□□ 1.1
ARHGEF39-206ENST00000490970 LY75O60449 1722 aa21.94■■□□□ 1.1
ARHGEF39-206ENST00000490970 NKX1-1Q15270 411 aaPredicted RBP21.93■■□□□ 1.1
ARHGEF39-206ENST00000490970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
ARHGEF39-206ENST00000490970 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
ARHGEF39-206ENST00000490970 PER1O15534 1290 aaPredicted RBP21.92■■□□□ 1.1
ARHGEF39-206ENST00000490970 MTFR1LQ9H019 292 aa21.92■■□□□ 1.1
ARHGEF39-206ENST00000490970 TOGARAM1Q9Y4F4 1720 aa21.91■■□□□ 1.1
ARHGEF39-206ENST00000490970 PHKG2P15735 406 aa21.9■■□□□ 1.1
ARHGEF39-206ENST00000490970 IFNL2Q8IZJ0 200 aa21.9■■□□□ 1.1
ARHGEF39-206ENST00000490970 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
ARHGEF39-206ENST00000490970 CC2D1BQ5T0F9 858 aaKnown RBP21.89■■□□□ 1.09
ARHGEF39-206ENST00000490970 PIGBQ92521 554 aa21.89■■□□□ 1.09
ARHGEF39-206ENST00000490970 PALLDQ8WX93 1383 aa21.88■■□□□ 1.09
ARHGEF39-206ENST00000490970 PNPLA7Q6ZV29 1317 aa21.88■■□□□ 1.09
ARHGEF39-206ENST00000490970 ITGB4P16144 1822 aa21.88■■□□□ 1.09
ARHGEF39-206ENST00000490970 AEBP1Q8IUX7 1158 aa21.88■■□□□ 1.09
ARHGEF39-206ENST00000490970 SGIP1Q9BQI5 828 aa21.88■■□□□ 1.09
ARHGEF39-206ENST00000490970 CNGB1Q14028 1251 aaPredicted RBP21.86■■□□□ 1.09
ARHGEF39-206ENST00000490970 IL13P35225 146 aa21.85■■□□□ 1.09
ARHGEF39-206ENST00000490970 MTHFSP49914 203 aa21.85■■□□□ 1.09
ARHGEF39-206ENST00000490970 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
ARHGEF39-206ENST00000490970 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
ARHGEF39-206ENST00000490970 SULT6B1Q6IMI4 303 aa21.84■■□□□ 1.09
ARHGEF39-206ENST00000490970 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
ARHGEF39-206ENST00000490970 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
ARHGEF39-206ENST00000490970 SLC16A10Q8TF71 515 aa21.83■■□□□ 1.09
ARHGEF39-206ENST00000490970 QSER1Q2KHR3 1735 aa21.83■■□□□ 1.08
ARHGEF39-206ENST00000490970 ARXQ96QS3 562 aa21.82■■□□□ 1.08
ARHGEF39-206ENST00000490970 FHDC1Q9C0D6 1143 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF39-206ENST00000490970 MSH5O43196 834 aa21.81■■□□□ 1.08
ARHGEF39-206ENST00000490970 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
ARHGEF39-206ENST00000490970 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
ARHGEF39-206ENST00000490970 ASAP1Q9ULH1 1129 aa21.81■■□□□ 1.08
ARHGEF39-206ENST00000490970 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
ARHGEF39-206ENST00000490970 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
ARHGEF39-206ENST00000490970 SYT17Q9BSW7 474 aa21.8■■□□□ 1.08
ARHGEF39-206ENST00000490970 C5P01031 1676 aa21.79■■□□□ 1.08
ARHGEF39-206ENST00000490970 ATG3Q9NT62 314 aa21.79■■□□□ 1.08
ARHGEF39-206ENST00000490970 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
ARHGEF39-206ENST00000490970 TAF1LQ8IZX4 1826 aa21.78■■□□□ 1.08
ARHGEF39-206ENST00000490970 KDRP35968 1356 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 LOC102724428A0A0B4J2F2 783 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 DCAF8L1A6NGE4 600 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 ERVV-2B6SEH9 535 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 SIK1P57059 783 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 DCAF5Q96JK2 942 aa21.77■■□□□ 1.08
ARHGEF39-206ENST00000490970 NPC1L1Q9UHC9 1359 aa21.76■■□□□ 1.07
ARHGEF39-206ENST00000490970 POLD1P28340 1107 aa21.76■■□□□ 1.07
ARHGEF39-206ENST00000490970 KDM6AO15550 1401 aaPredicted RBP21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 HMOX1P09601 288 aa21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 HMGB2P26583 209 aaKnown RBP21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 C1orf141Q5JVX7 400 aa21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 AK7Q96M32 723 aa21.75■■□□□ 1.07
ARHGEF39-206ENST00000490970 ATP6V1AP38606 617 aa21.74■■□□□ 1.07
ARHGEF39-206ENST00000490970 CABP4P57796 275 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms